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The map label for this gene is holC

Identifier: 161870423

GI number: 161870423

Start: 1497412

End: 1497852

Strand: Reverse

Name: holC

Synonym: NMCC_1471

Alternate gene names: NA

Gene position: 1497852-1497412 (Counterclockwise)

Preceding gene: 161870425

Following gene: 161870422

Centisome position: 69.56

GC content: 56.92

Gene sequence:

>441_bases
ATGCCGAAAGCCACCTTTTACACGCACGTTGCCCAAGTTCCGATTTTCACCTGCCGCCTGATTGCCCGTGCGATTCGGGA
CGGCGGCAGGATACTGGTGTGGTCCGATTCGTTCGGGCAGCTTCAGGAATTGGACAAAATGCTTTGGCAATACGAGGCCG
AGAGTTTTATTCCGCACGAAATTTGGGAAACGGAAGAAGCCATGCCGTCTGAAACATTCGTCCTGCTTGCCTGCGGCGGC
AATCTGCCCCGAATTCCCGAAGGCATGGCCGTTTTGAACCTGTCCGACGGTTTTTGGAACACCGCTCCGGTCTTGCCCGC
GCGCGTTTTGGAAATCGTCGGCAACAGCTTGGAAGAGCTCGCCGACGCGCGCGAACGCTTTACCGCCTACCGCCGAAGCG
GTTTTGCCATCGAACATCACGGCATGGAGGGCAAGGCATAA

Upstream 100 bases:

>100_bases
TGCTGAACTATCTGCGGAATCTTTAACCCCGTAATCATGCCGTCTGAAACAGTGTACCGCACCGTTCAGACGGCATCGTC
CTGCCAAATGTTCAAACAAT

Downstream 100 bases:

>100_bases
AATGCCGTCTGAAATGCCGCATTTACAAAATTTAAACAGGCTTGATTCTATTTGATTAAAATTTCCTTATCGGTTGAACC
CCGCCACTTGGACATCTGTC

Product: DNA polymerase III chi subunit

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Chi Subunit HolC

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MPKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGQLQELDKMLWQYEAESFIPHEIWETEEAMPSETFVLLACGG
NLPRIPEGMAVLNLSDGFWNTAPVLPARVLEIVGNSLEELADARERFTAYRRSGFAIEHHGMEGKA

Sequences:

>Translated_146_residues
MPKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGQLQELDKMLWQYEAESFIPHEIWETEEAMPSETFVLLACGG
NLPRIPEGMAVLNLSDGFWNTAPVLPARVLEIVGNSLEELADARERFTAYRRSGFAIEHHGMEGKA
>Mature_145_residues
PKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGQLQELDKMLWQYEAESFIPHEIWETEEAMPSETFVLLACGGN
LPRIPEGMAVLNLSDGFWNTAPVLPARVLEIVGNSLEELADARERFTAYRRSGFAIEHHGMEGKA

Specific function: Unknown

COG id: COG2927

COG function: function code L; DNA polymerase III, chi subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 16452; Mature: 16321

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGQLQELDKMLWQYEAESFIPHE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCHH
IWETEEAMPSETFVLLACGGNLPRIPEGMAVLNLSDGFWNTAPVLPARVLEIVGNSLEEL
HHCCHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHH
ADARERFTAYRRSGFAIEHHGMEGKA
HHHHHHHHHHHHCCCEEEECCCCCCC
>Mature Secondary Structure 
PKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGQLQELDKMLWQYEAESFIPHE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCHH
IWETEEAMPSETFVLLACGGNLPRIPEGMAVLNLSDGFWNTAPVLPARVLEIVGNSLEEL
HHCCHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHH
ADARERFTAYRRSGFAIEHHGMEGKA
HHHHHHHHHHHHCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA