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The map label for this gene is ybjE [H]

Identifier: 161870416

GI number: 161870416

Start: 1492039

End: 1492941

Strand: Reverse

Name: ybjE [H]

Synonym: NMCC_1464

Alternate gene names: 161870416

Gene position: 1492941-1492039 (Counterclockwise)

Preceding gene: 161870417

Following gene: 161870415

Centisome position: 69.33

GC content: 57.03

Gene sequence:

>903_bases
ATGGACAGCCTGATGACATTGCTTTCGGTATTGGTACCGATGTTCGCCGGATTTTTTATCCGTGTGCCCAAGCCTTACCT
GCCCGCTTTGGACAAGGTGCTGTCGGTTTTGGTGTATGCCGTGCTGCTGCTGATCGGCGTATCGTTGTCGCGCGTGGAGG
ATTTGGGTTCGCGGTTGGACGATATGGCGTTGACGGTTCTGTGGCTGTTTGTTTGTACGGTCGGGGCGAACCTGCTTGCT
TTGGCAGTGTTGGGAAAGTTATTCCCGTGGCGGATAAAGGGGAAAGGGAAGGGCGTTTCGGTCGGTGTGTCGGGCAGTGT
GGGGCAGCTCGGATGCGTGCTGCTCGGATTTGCATCCGGCAAACTGATGCGCGATATTTGGATGCCGTCTGAAAACGCGG
GTATGTATTGTCTGATGCTGCTGGTGCTCCTCATCGGCGTACAGCTCAAAAGCAGCGGCGTATCGTTGCGGCAGGTTTTG
GTCAACCGCAGGGGTATTCGGTTGTCGGTCTGGTTTATGCTTTCATCTCTTTCAGGCGGGCTGCTGTTTGCCGCATCGGC
AGACGGTGTGTCGTGGGTGAAAGGTTTGGCGATGGCTTCCGGCTTCGGTTGGTATTCCCTCTCGGGTTTGGTGATGACCG
AGGCTTACGGCGCGGTATGGGGCAGTATCGCGCTTTTGAACGATTTGGCACGAGAGCTGTTCGCGCTGGCATTTATTCCG
CTGCTGATGAAGCGTTTTCCCGATGCGGCAGTGGGGGTCGGCGGCGCGACCAGTATGGATTTCACATTGCCCGTGATTCG
GGGTGCGGGCGGCTTGGAAGCCGTACCGGTAGCGGTCAGCTTCGGCGTGGTGGTCAATATCGCCGCTCCGTTTCTGATGG
TGGTGTTTTCCGCTTTGGGCTGA

Upstream 100 bases:

>100_bases
CGAACCTGATGCCGTCTGAAATATGGATGCGGGTATCTGCAATTTTCAGACGGCAATTTTTAAACCGCATATATCATGCG
GCAATAAAGGAGGGCAGTAG

Downstream 100 bases:

>100_bases
ACGCGGTAAAATCGGCATCCCGATGCAAGGAGGCAGAAAACGATGAAACCGAAAATCCAAAGGCACGGAGAGATTTTAAG
CCTTGTCCGCCGGCATCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MDSLMTLLSVLVPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLLIGVSLSRVEDLGSRLDDMALTVLWLFVCTVGANLLA
LAVLGKLFPWRIKGKGKGVSVGVSGSVGQLGCVLLGFASGKLMRDIWMPSENAGMYCLMLLVLLIGVQLKSSGVSLRQVL
VNRRGIRLSVWFMLSSLSGGLLFAASADGVSWVKGLAMASGFGWYSLSGLVMTEAYGAVWGSIALLNDLARELFALAFIP
LLMKRFPDAAVGVGGATSMDFTLPVIRGAGGLEAVPVAVSFGVVVNIAAPFLMVVFSALG

Sequences:

>Translated_300_residues
MDSLMTLLSVLVPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLLIGVSLSRVEDLGSRLDDMALTVLWLFVCTVGANLLA
LAVLGKLFPWRIKGKGKGVSVGVSGSVGQLGCVLLGFASGKLMRDIWMPSENAGMYCLMLLVLLIGVQLKSSGVSLRQVL
VNRRGIRLSVWFMLSSLSGGLLFAASADGVSWVKGLAMASGFGWYSLSGLVMTEAYGAVWGSIALLNDLARELFALAFIP
LLMKRFPDAAVGVGGATSMDFTLPVIRGAGGLEAVPVAVSFGVVVNIAAPFLMVVFSALG
>Mature_300_residues
MDSLMTLLSVLVPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLLIGVSLSRVEDLGSRLDDMALTVLWLFVCTVGANLLA
LAVLGKLFPWRIKGKGKGVSVGVSGSVGQLGCVLLGFASGKLMRDIWMPSENAGMYCLMLLVLLIGVQLKSSGVSLRQVL
VNRRGIRLSVWFMLSSLSGGLLFAASADGVSWVKGLAMASGFGWYSLSGLVMTEAYGAVWGSIALLNDLARELFALAFIP
LLMKRFPDAAVGVGGATSMDFTLPVIRGAGGLEAVPVAVSFGVVVNIAAPFLMVVFSALG

Specific function: Unknown

COG id: COG2431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1452 [H]

Homologues:

Organism=Escherichia coli, GI87081795, Length=300, Percent_Identity=39.3333333333333, Blast_Score=189, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005642
- ProDom:   PD022789 [H]

Pfam domain/function: PF03956 DUF340 [H]

EC number: NA

Molecular weight: Translated: 31626; Mature: 31626

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLMTLLSVLVPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLLIGVSLSRVEDLGSRLD
CCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
DMALTVLWLFVCTVGANLLALAVLGKLFPWRIKGKGKGVSVGVSGSVGQLGCVLLGFASG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCHHHHHHHHHHHCC
KLMRDIWMPSENAGMYCLMLLVLLIGVQLKSSGVSLRQVLVNRRGIRLSVWFMLSSLSGG
HHHHHHCCCCCCCCHHHHHHHHHHHCCHHCCCCHHHHHHHHHCCCCEEEHHHHHHHCCCC
LLFAASADGVSWVKGLAMASGFGWYSLSGLVMTEAYGAVWGSIALLNDLARELFALAFIP
EEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLMKRFPDAAVGVGGATSMDFTLPVIRGAGGLEAVPVAVSFGVVVNIAAPFLMVVFSALG
HHHHHCCCHHCCCCCCCCCCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDSLMTLLSVLVPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLLIGVSLSRVEDLGSRLD
CCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
DMALTVLWLFVCTVGANLLALAVLGKLFPWRIKGKGKGVSVGVSGSVGQLGCVLLGFASG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCHHHHHHHHHHHCC
KLMRDIWMPSENAGMYCLMLLVLLIGVQLKSSGVSLRQVLVNRRGIRLSVWFMLSSLSGG
HHHHHHCCCCCCCCHHHHHHHHHHHCCHHCCCCHHHHHHHHHCCCCEEEHHHHHHHCCCC
LLFAASADGVSWVKGLAMASGFGWYSLSGLVMTEAYGAVWGSIALLNDLARELFALAFIP
EEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLMKRFPDAAVGVGGATSMDFTLPVIRGAGGLEAVPVAVSFGVVVNIAAPFLMVVFSALG
HHHHHCCCHHCCCCCCCCCCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]