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The map label for this gene is lolB [H]

Identifier: 161869807

GI number: 161869807

Start: 837338

End: 837919

Strand: Direct

Name: lolB [H]

Synonym: NMCC_0832

Alternate gene names: 161869807

Gene position: 837338-837919 (Clockwise)

Preceding gene: 161869806

Following gene: 161869808

Centisome position: 38.88

GC content: 54.12

Gene sequence:

>582_bases
ATGAAACACACTGTATCCGCATCGGTCATCCTGCTTTTGACCGCTTGCGCGCAATTACCTCAAAATAACGAAAACCTGTG
GCAGCCGTCCGAACACACCCGCAGTTTCACGGCAGAAGGGCGGTTGGCAGTGAAAGCGGAAGGGAAAGGTTCGTATGCAA
ATTTCGATTGGACATACCAACCGCCCGTGGAAACCATCAATATCAATACCCCTTTGGGCAGTACGCTCGGGCAGTTGTGT
CAAGACAGGGACGGCGCATTGGCAGTGGACGGCAAAGGAAATGTCTATCAGGCGGAAAGTGCGGAAGAATTGAGCAGGCA
GCTGGTCGGTTTCAAACTGCCAATCCAATATCTGCATATCTGGGCAGATGGCAGGCGTGTGGCGGGCGCGCCTTACCGCA
TCCTGCCGGACGGCATATTGGAACAATACGGTTGGACTGTCGGCAGAACCGCCGACAGTGGGGGGCAAGTCCGAACGTTG
CAACTGAATAACGGAAATTTGAACATCAGGCTGGTTTTCACCGAAATCGGTATGCCGTCTGAAACCGAAACCCCGGAACG
CTGTGCGGCGCGCACGAGATAA

Upstream 100 bases:

>100_bases
AAGCTGCGGCATTCGGGCAAACGGCACGCAGTTCGCACGCGTTTTGCACGGCACACCGAACCCATCGGCCGGCAGGATGG
CATCCGTTAAGGAAATTCTG

Downstream 100 bases:

>100_bases
GGCGGACAGATGAATATTGCGGACGGACGGCAGGCGTTTCCCGCACCTGCAAAACTGAATCTCGATTTGAGGATTACCGG
CAGGCGGGAAGACGGTTATC

Product: outer membrane lipoprotein LolB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKHTVSASVILLLTACAQLPQNNENLWQPSEHTRSFTAEGRLAVKAEGKGSYANFDWTYQPPVETININTPLGSTLGQLC
QDRDGALAVDGKGNVYQAESAEELSRQLVGFKLPIQYLHIWADGRRVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTL
QLNNGNLNIRLVFTEIGMPSETETPERCAARTR

Sequences:

>Translated_193_residues
MKHTVSASVILLLTACAQLPQNNENLWQPSEHTRSFTAEGRLAVKAEGKGSYANFDWTYQPPVETININTPLGSTLGQLC
QDRDGALAVDGKGNVYQAESAEELSRQLVGFKLPIQYLHIWADGRRVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTL
QLNNGNLNIRLVFTEIGMPSETETPERCAARTR
>Mature_193_residues
MKHTVSASVILLLTACAQLPQNNENLWQPSEHTRSFTAEGRLAVKAEGKGSYANFDWTYQPPVETININTPLGSTLGQLC
QDRDGALAVDGKGNVYQAESAEELSRQLVGFKLPIQYLHIWADGRRVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTL
QLNNGNLNIRLVFTEIGMPSETETPERCAARTR

Specific function: Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the lolA protein [H]

COG id: COG3017

COG function: function code M; Outer membrane lipoprotein involved in outer membrane biogenesis

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004565 [H]

Pfam domain/function: PF03550 LolB [H]

EC number: NA

Molecular weight: Translated: 21228; Mature: 21228

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHTVSASVILLLTACAQLPQNNENLWQPSEHTRSFTAEGRLAVKAEGKGSYANFDWTYQ
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCEEECCCEEEEEECCCCCCCCCCEEEC
PPVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAEELSRQLVGFKLPIQYLHI
CCCCEEEECCCCCHHHHHHHCCCCCEEEECCCCCEEECCCHHHHHHHHCCEECCEEEEEE
WADGRRVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTLQLNNGNLNIRLVFTEIGMPS
EECCCEECCCCEEECCHHHHHHHCCEEECCCCCCCCEEEEEECCCCEEEEEEEEECCCCC
ETETPERCAARTR
CCCCHHHHHCCCC
>Mature Secondary Structure
MKHTVSASVILLLTACAQLPQNNENLWQPSEHTRSFTAEGRLAVKAEGKGSYANFDWTYQ
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCEEECCCEEEEEECCCCCCCCCCEEEC
PPVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAEELSRQLVGFKLPIQYLHI
CCCCEEEECCCCCHHHHHHHCCCCCEEEECCCCCEEECCCHHHHHHHHCCEECCEEEEEE
WADGRRVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTLQLNNGNLNIRLVFTEIGMPS
EECCCEECCCCEEECCHHHHHHHCCEEECCCCCCCCEEEEEECCCCEEEEEEEEECCCCC
ETETPERCAARTR
CCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]