Click here to switch to the map view.

The map label for this gene is cnp1

Identifier: 161869619

GI number: 161869619

Start: 648786

End: 649397

Strand: Reverse

Name: cnp1

Synonym: NMCC_0636

Alternate gene names: NA

Gene position: 649397-648786 (Counterclockwise)

Preceding gene: 161869623

Following gene: 161869605

Centisome position: 30.16

GC content: 57.52

Gene sequence:

>612_bases
ATGCGCCGCGCCATCCTTCTGATTCTGACCCTGACTGCCGGCACGTCCCTTGCTGCCGGCTTCAGCCAAAAAGACACGCC
GATCAACACCCGCTACCGCGAAACGCCCGAAGAAGCCGCCGCCCGCGAATTTAAAGAACATACCGCCAAACTGCCGCCGC
TGCCCGATACGCACTCGGACGGCTGGTTTGACATTTATGTGGATGAAAATTACGGCAAACAGCCGAAAATCCTGCTCGAC
AGCCTGCAAATTATGCCCGCGCCCGACGGCAGCATCCGCTACATTCTCAATATCCGCTCCGACAAAGGCTACGACAACCT
GACTGCCGAAGGCATATTCTGCGCCCGCTCATCCATCCGTTTCGGCAACGACAAACTTTCCTCCTACAAAGTGTTCGGCT
ACGGCGACACGGTCAACCGCCGCTGGATACAGCCCCGAAACGCCGAATGGAAACCGATAGGCGGTACATTAAGCCGCAAC
GACGCACTGCGCACCGTCCTGTATCAGGCATTCTGCGAGGGCGGTGTACCCGCCGACACGAAAGGTTTGGTACAACGCCT
GAAAGAACGTGCCGGACGCTATGCCCCGTCGATAAAGCCGCACGACAAATAA

Upstream 100 bases:

>100_bases
CCGTTTAAAAAATGGGAATCGGGGGGAGATTATACCCCAGTTGCTTGCAGCCCCCTTTGCCAACCCATAAAATAACGCCG
TTTTCAATTTGGAGAGATCT

Downstream 100 bases:

>100_bases
CCAGACACAAAAATACCGTCTGAAACATCGGTTTCAGACGGTATTCGATTCATCAGCCATCAGGCGGCAGAAACTTTGTC
CTGACGGCACAACAGCGTAA

Product: periplasmic protein

Products: NA

Alternate protein names: Periplasmic Protein

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MRRAILLILTLTAGTSLAAGFSQKDTPINTRYRETPEEAAAREFKEHTAKLPPLPDTHSDGWFDIYVDENYGKQPKILLD
SLQIMPAPDGSIRYILNIRSDKGYDNLTAEGIFCARSSIRFGNDKLSSYKVFGYGDTVNRRWIQPRNAEWKPIGGTLSRN
DALRTVLYQAFCEGGVPADTKGLVQRLKERAGRYAPSIKPHDK

Sequences:

>Translated_203_residues
MRRAILLILTLTAGTSLAAGFSQKDTPINTRYRETPEEAAAREFKEHTAKLPPLPDTHSDGWFDIYVDENYGKQPKILLD
SLQIMPAPDGSIRYILNIRSDKGYDNLTAEGIFCARSSIRFGNDKLSSYKVFGYGDTVNRRWIQPRNAEWKPIGGTLSRN
DALRTVLYQAFCEGGVPADTKGLVQRLKERAGRYAPSIKPHDK
>Mature_203_residues
MRRAILLILTLTAGTSLAAGFSQKDTPINTRYRETPEEAAAREFKEHTAKLPPLPDTHSDGWFDIYVDENYGKQPKILLD
SLQIMPAPDGSIRYILNIRSDKGYDNLTAEGIFCARSSIRFGNDKLSSYKVFGYGDTVNRRWIQPRNAEWKPIGGTLSRN
DALRTVLYQAFCEGGVPADTKGLVQRLKERAGRYAPSIKPHDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22820; Mature: 22820

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAILLILTLTAGTSLAAGFSQKDTPINTRYRETPEEAAAREFKEHTAKLPPLPDTHSD
CCCEEEEEEEECCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
GWFDIYVDENYGKQPKILLDSLQIMPAPDGSIRYILNIRSDKGYDNLTAEGIFCARSSIR
CEEEEEEECCCCCCCCEEEECEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCC
FGNDKLSSYKVFGYGDTVNRRWIQPRNAEWKPIGGTLSRNDALRTVLYQAFCEGGVPADT
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH
KGLVQRLKERAGRYAPSIKPHDK
HHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRRAILLILTLTAGTSLAAGFSQKDTPINTRYRETPEEAAAREFKEHTAKLPPLPDTHSD
CCCEEEEEEEECCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
GWFDIYVDENYGKQPKILLDSLQIMPAPDGSIRYILNIRSDKGYDNLTAEGIFCARSSIR
CEEEEEEECCCCCCCCEEEECEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCC
FGNDKLSSYKVFGYGDTVNRRWIQPRNAEWKPIGGTLSRNDALRTVLYQAFCEGGVPADT
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH
KGLVQRLKERAGRYAPSIKPHDK
HHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA