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The map label for this gene is ycaR [C]

Identifier: 161869612

GI number: 161869612

Start: 644775

End: 644957

Strand: Direct

Name: ycaR [C]

Synonym: NMCC_0628

Alternate gene names: 161869612

Gene position: 644775-644957 (Clockwise)

Preceding gene: 161869611

Following gene: 161869613

Centisome position: 29.94

GC content: 49.73

Gene sequence:

>183_bases
ATGGAAAAAAAATTCTTAGACATCCTCGTCTGCCCCGTTACCAAAGGCAGGCTGGAATATCATCAGGACAAACAGGAATT
GTGGAGCCGTCAGGCGAAGCTGGCGTATCCGATTAAAGACGGCATCCCCTATATGCTGGAAAACGAAGCGCGAGCGTTGG
GCGAAGAGGAGCTCAAAGTATGA

Upstream 100 bases:

>100_bases
CCGGACAGCTTGGGAAAAGGCATCAGAAATAAATGATAGCCGTCTGAAATATTGCAGAGGGCATCCGATTGATTAAACCA
TCAAACCCGAAAGCAACCTT

Downstream 100 bases:

>100_bases
CCGAATTCGTCGTATTGATTCCGGCGCGGCTGGATTCGTCGCGCCTGCCCGGAAAAGCCTTGGCGGACATCCACGGCAAA
CCGATGGTCGTGCGCGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPYMLENEARALGEEELKV

Sequences:

>Translated_60_residues
MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPYMLENEARALGEEELKV
>Mature_60_residues
MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPYMLENEARALGEEELKV

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family [H]

Homologues:

Organism=Escherichia coli, GI1787146, Length=59, Percent_Identity=49.1525423728814, Blast_Score=66, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005651 [H]

Pfam domain/function: PF03966 Trm112p [H]

EC number: NA

Molecular weight: Translated: 7063; Mature: 7063

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPYMLENEARALGEEELKV
CCCCCEEEEECCCCCCCHHHCCCHHHHHHHCCCCCCCCCCCCCCEECCHHHHCCCHHCCC
>Mature Secondary Structure
MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPYMLENEARALGEEELKV
CCCCCEEEEECCCCCCCHHHCCCHHHHHHHCCCCCCCCCCCCCCEECCHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA