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The map label for this gene is rng [H]

Identifier: 161869427

GI number: 161869427

Start: 452771

End: 454264

Strand: Reverse

Name: rng [H]

Synonym: NMCC_0435

Alternate gene names: 161869427

Gene position: 454264-452771 (Counterclockwise)

Preceding gene: 161869431

Following gene: 161869423

Centisome position: 21.1

GC content: 56.76

Gene sequence:

>1494_bases
ATGTTGTCAGGACTCCCCATCCCCAAAGACATCGCGCGCCCGCCCGAAACGATATTGGTCAACATCACGCCGCAGGAAAC
GCGCGTAGCGGTGTTGGAGGAAAACAATATCTGCGAGCTGCACATCGAGCGCAACAGCGAACACAGCCTAGTCGGCAATA
TCTATTTGGGCGTGGTGCGCCGCGTGCTGCCTGGGATGCAGAGCGCGTTTATCGACATCGGCTTGGAACGCGCGGCGTTT
TTACACATCGTCGATGTCCTCGAACAACGCCGCAACCCCGAAGAAACCCAGCGCATCGAACATATGCTGTTTGAAGGGCA
GTCTGTTTTGGTGCAGGTCATCAAAGACCCGATCAACACCAAAGGCGCGCGGCTTTCCACCCAAATCTCGCTGGCGGGGC
GTTTCCTCGTCCATCTTCCGCAAGAAGACCACATCGGCGTGTCCCAACGCATCGAAGACGATGCCGAACGCAGCAGCCTG
CGCGAACGCCTCGACAAGCTCCTGCCGGAAAATGCCTGCCGGGGCTACATCATCCGCACCAACGCCGAAAACGCCACCGA
CGAACAGCTCCAGTCCGACATCGACTACCTGACCAAAGTGTGGGAACACATCCAAGAACAGGCGAAAATCCGGCCGCCGG
AAACCCTGCTTTATCAGGATTTGCCCTTGAGTTTGCGCGTGTTGCGCGATATGGTCGGCTGCGACACGCAAAAAATCCTC
GTCGATTCCACCGTAAACCACGGCCGCATGACGCGTTTTGCCGAACAATACGTCCACGGCGCATTGGGCAGGATAGAATT
GTTCAAAGGCGAACGCCCGCTATTTGAAACCCACAACGTCGAACAGGAAATCAGCCGCGCCCTGCAACCGCGCGTCAACC
TCAACTTCGGCAGCTACCTGATTATCGAATCCACCGAAGCGATGACCACGATAGACGTGAACACAGGCGGCTTCGTCGGC
GCACGCAATTTCGATGAAACGATTTTCCGCACCAACCTCGAAGCCTGCCACACCATCGCCCGCGAATTGAGGCTGCGCAA
CCTCGGCGGCATCATCATCATCGACTTCATCGATATGGCGCAGGAAAGCCACCGCGAAGCCGTGTTGCAGGAGCTTGCCA
AAGCCCTCGCCTTCGACCGTACCCGCGTTACCCTGCACGGTTTTACCAGCCTGGGACTGGTCGAGCTGACGCGCAAACGC
TCGCGCGAAAACTTAAACCAAGTCCTCTGCGAACCCTGCCCTTCCTGCCAAGGCAGAGGCCGTCTGAAAACGCCGCAAAC
CGTGTGCTACGAAATCCAGCGCGAAATCGTCCGCGAAGCGCGCCGTTACGATGCCGAAAGTTTCCGCATCCTCGCCGCCC
CCAACGTCATCGATTTGTTTTTGGACGAAGAATCGCAATCCTTGGCAATGCTGATAGATTTCATCGGCAAACCGATTTCT
CTGGCGGTCGAAACCGCTTACACGCAGGAACAATACGATATAGTGCTGATGTAA

Upstream 100 bases:

>100_bases
CTTTTTTAAAGTATGATAGACATTGTGAAAAATATTTTTGCACCCGCGCTGCGCGGCGGAACGGATGCAAAATATTTTTA
TTACATTTTCAGGAAAAACC

Downstream 100 bases:

>100_bases
AAAATGCCGTCTGAAGCCTTCAGACGGCATCTGTCTATTTCAGGGTTTCCTTGTCCAACAACGCCCGTATCAACAGACCG
TGTCCGAAACGTCGGCTGTC

Product: putative ribonucleases G / cytoplasmic axial filament protein

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIERNSEHSLVGNIYLGVVRRVLPGMQSAFIDIGLERAAF
LHIVDVLEQRRNPEETQRIEHMLFEGQSVLVQVIKDPINTKGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSL
RERLDKLLPENACRGYIIRTNAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLYQDLPLSLRVLRDMVGCDTQKIL
VDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFETHNVEQEISRALQPRVNLNFGSYLIIESTEAMTTIDVNTGGFVG
ARNFDETIFRTNLEACHTIARELRLRNLGGIIIIDFIDMAQESHREAVLQELAKALAFDRTRVTLHGFTSLGLVELTRKR
SRENLNQVLCEPCPSCQGRGRLKTPQTVCYEIQREIVREARRYDAESFRILAAPNVIDLFLDEESQSLAMLIDFIGKPIS
LAVETAYTQEQYDIVLM

Sequences:

>Translated_497_residues
MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIERNSEHSLVGNIYLGVVRRVLPGMQSAFIDIGLERAAF
LHIVDVLEQRRNPEETQRIEHMLFEGQSVLVQVIKDPINTKGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSL
RERLDKLLPENACRGYIIRTNAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLYQDLPLSLRVLRDMVGCDTQKIL
VDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFETHNVEQEISRALQPRVNLNFGSYLIIESTEAMTTIDVNTGGFVG
ARNFDETIFRTNLEACHTIARELRLRNLGGIIIIDFIDMAQESHREAVLQELAKALAFDRTRVTLHGFTSLGLVELTRKR
SRENLNQVLCEPCPSCQGRGRLKTPQTVCYEIQREIVREARRYDAESFRILAAPNVIDLFLDEESQSLAMLIDFIGKPIS
LAVETAYTQEQYDIVLM
>Mature_497_residues
MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIERNSEHSLVGNIYLGVVRRVLPGMQSAFIDIGLERAAF
LHIVDVLEQRRNPEETQRIEHMLFEGQSVLVQVIKDPINTKGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSL
RERLDKLLPENACRGYIIRTNAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLYQDLPLSLRVLRDMVGCDTQKIL
VDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFETHNVEQEISRALQPRVNLNFGSYLIIESTEAMTTIDVNTGGFVG
ARNFDETIFRTNLEACHTIARELRLRNLGGIIIIDFIDMAQESHREAVLQELAKALAFDRTRVTLHGFTSLGLVELTRKR
SRENLNQVLCEPCPSCQGRGRLKTPQTVCYEIQREIVREARRYDAESFRILAAPNVIDLFLDEESQSLAMLIDFIGKPIS
LAVETAYTQEQYDIVLM

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=489, Percent_Identity=49.2842535787321, Blast_Score=450, Evalue=1e-128,
Organism=Escherichia coli, GI1787325, Length=464, Percent_Identity=35.5603448275862, Blast_Score=259, Evalue=3e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 56594; Mature: 56594

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIERNSEHSLVGNIYLGVVR
CCCCCCCCHHHCCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHH
RVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPEETQRIEHMLFEGQSVLVQVIKDPINT
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCC
KGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSLRERLDKLLPENACRGYIIRT
CCCEEEEEHEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
NAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLYQDLPLSLRVLRDMVGCDTQKIL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCCCEEE
VDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFETHNVEQEISRALQPRVNLNFGSYL
EECCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCHHHCCHHHHHHHHHCCCEECCCCCEE
IIESTEAMTTIDVNTGGFVGARNFDETIFRTNLEACHTIARELRLRNLGGIIIIDFIDMA
EEECCCCEEEEECCCCCCEECCCCHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEHHHH
QESHREAVLQELAKALAFDRTRVTLHGFTSLGLVELTRKRSRENLNQVLCEPCPSCQGRG
HHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RLKTPQTVCYEIQREIVREARRYDAESFRILAAPNVIDLFLDEESQSLAMLIDFIGKPIS
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCE
LAVETAYTQEQYDIVLM
EEEHHHHCCCCCCEEEC
>Mature Secondary Structure
MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIERNSEHSLVGNIYLGVVR
CCCCCCCCHHHCCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHH
RVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPEETQRIEHMLFEGQSVLVQVIKDPINT
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCC
KGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSLRERLDKLLPENACRGYIIRT
CCCEEEEEHEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
NAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLYQDLPLSLRVLRDMVGCDTQKIL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCCCEEE
VDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFETHNVEQEISRALQPRVNLNFGSYL
EECCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCHHHCCHHHHHHHHHCCCEECCCCCEE
IIESTEAMTTIDVNTGGFVGARNFDETIFRTNLEACHTIARELRLRNLGGIIIIDFIDMA
EEECCCCEEEEECCCCCCEECCCCHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEHHHH
QESHREAVLQELAKALAFDRTRVTLHGFTSLGLVELTRKRSRENLNQVLCEPCPSCQGRG
HHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RLKTPQTVCYEIQREIVREARRYDAESFRILAAPNVIDLFLDEESQSLAMLIDFIGKPIS
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCE
LAVETAYTQEQYDIVLM
EEEHHHHCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]