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The map label for this gene is comEA [H]

Identifier: 161869185

GI number: 161869185

Start: 188031

End: 188417

Strand: Direct

Name: comEA [H]

Synonym: NMCC_0188

Alternate gene names: 161869185

Gene position: 188031-188417 (Clockwise)

Preceding gene: 161869184

Following gene: 161869186

Centisome position: 8.73

GC content: 52.71

Gene sequence:

>387_bases
TTGAAACTTTGGGATATTCATTTTAAAATGACTCGTTTTATCGTCGCAAGATGCGGTTTATTGTTTGCAACCCTTAAAGG
AAAAACCATGAAGAAAATGTTCGTGCTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAAACATCAATG
CGGCTTCGCAGCAGGAGTTGGAGGCGCTGCCGGGCATAGGCCCTGCGAAGGCGAAGGCCATTGCGGAATACCGTGCGCAA
AACGGTGCGTTCAAGTCTGTGGACGATTTGACCAAGGTAAAGGGCATCGGCCCTGCGGTGCTGGCGAAGCTGAAGGATCA
GGCTTCGGTCGGCGCGCCCGCACCAAAAGGCCCAGCTAAACCAGTGCTGCCCGCGGATAAAAAATAG

Upstream 100 bases:

>100_bases
ACCCCCGATTATTCGGGGGTTTTTGCTTTGCCCGGAAAAAATGTCGGGGATGGCGGGACGGCATCCGTACGGCGTCCGGT
CGGGTTTGCGGAGGAACGGC

Downstream 100 bases:

>100_bases
AGTGGGAAATATGCATACTGTTGAATGGGATAGTAAGTCTGTTCAAAGAAATATGTTGAATAATCTGTTCTTATTGGAAG
TAAAGTAATGACTGATAATC

Product: DNA transport competence protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MKLWDIHFKMTRFIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEYRAQ
NGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPADKK

Sequences:

>Translated_128_residues
MKLWDIHFKMTRFIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEYRAQ
NGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPADKK
>Mature_128_residues
MKLWDIHFKMTRFIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEYRAQ
NGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPADKK

Specific function: Needed for both DNA binding and transport. It is absolutely required for the uptake of transforming DNA but not for binding. Its role in binding may be indirect [H]

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HhH domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004787
- InterPro:   IPR004509
- InterPro:   IPR000445
- InterPro:   IPR003583
- InterPro:   IPR010994
- InterPro:   IPR019554 [H]

Pfam domain/function: PF00633 HHH; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 13679; Mature: 13679

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLWDIHFKMTRFIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQEL
CCEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
EALPGIGPAKAKAIAEYRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPAPKGPAK
HHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
PVLPADKK
CCCCCCCC
>Mature Secondary Structure
MKLWDIHFKMTRFIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQEL
CCEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
EALPGIGPAKAKAIAEYRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPAPKGPAK
HHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
PVLPADKK
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7968523; 8969508; 9384377; 7768800 [H]