Click here to switch to the map view.

The map label for this gene is 161869186

Identifier: 161869186

GI number: 161869186

Start: 188505

End: 188954

Strand: Direct

Name: 161869186

Synonym: NMCC_0189

Alternate gene names: NA

Gene position: 188505-188954 (Clockwise)

Preceding gene: 161869185

Following gene: 161869189

Centisome position: 8.75

GC content: 38.22

Gene sequence:

>450_bases
ATGACTGATAATCGGGGGTTTACGCTGGTTGAATTAATATCAGTGGTCTTGATATTGTCTGTACTTGCTTTAATTGTTTA
TCCGAGCTATCGCAATTATGTTGAGAAAGCAAAGATAAATGCAGTGCGGGCAGCCTTGTTAGAAAATGCACATTTTATGG
AAAAGTTTTATCTGCAGAATGGGAGGTTTAAACAAACATCTACCAAGTGGCCAAGTTTGCCGATTAAAGAGGCAGAAGGC
TTTTGTATCCGTTTGAATGGAATCGCGCGCGGGGCTTTAGACAGTAAATTCATGTTGAAGGCGGTAGCCATAGATAAAGA
TAAAAATCCTTTTATTATTAAGATGAATGAAAATCTAGTAACCTTTATTTGCAAGAAGTCCGCCAGTTCGTGTAGTGACG
GGCTGGATTATTTTAAAGGAAATGATAAGGACTGCAAGTTACTTAAGTAG

Upstream 100 bases:

>100_bases
GGATAAAAAATAGAGTGGGAAATATGCATACTGTTGAATGGGATAGTAAGTCTGTTCAAAGAAATATGTTGAATAATCTG
TTCTTATTGGAAGTAAAGTA

Downstream 100 bases:

>100_bases
GCTTGTTTACAAATCGATCGATAGTGTTTCAGTATTTGTGCGGTTTTCCGCCTTGATGGAATGAGAATCGTGTAATATTA
AGCCTATAGTTATGACTCGT

Product: type IV pilin-related protein

Products: NA

Alternate protein names: Type-IV Pilin

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRAALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEG
FCIRLNGIARGALDSKFMLKAVAIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK

Sequences:

>Translated_149_residues
MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRAALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEG
FCIRLNGIARGALDSKFMLKAVAIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK
>Mature_148_residues
TDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRAALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGF
CIRLNGIARGALDSKFMLKAVAIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK

Specific function: Unknown

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16835; Mature: 16704

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRAALLENAHFMEKFYLQN
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GRFKQTSTKWPSLPIKEAEGFCIRLNGIARGALDSKFMLKAVAIDKDKNPFIIKMNENLV
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHEEECCCCCCEEEEECCCEE
TFICKKSASSCSDGLDYFKGNDKDCKLLK
EEEECCCCCCHHHHHHHHCCCCCCCEECC
>Mature Secondary Structure 
TDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRAALLENAHFMEKFYLQN
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GRFKQTSTKWPSLPIKEAEGFCIRLNGIARGALDSKFMLKAVAIDKDKNPFIIKMNENLV
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHEEECCCCCCEEEEECCCEE
TFICKKSASSCSDGLDYFKGNDKDCKLLK
EEEECCCCCCHHHHHHHHCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA