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The map label for this gene is ctrC [H]

Identifier: 161869092

GI number: 161869092

Start: 79518

End: 80243

Strand: Direct

Name: ctrC [H]

Synonym: NMCC_0081

Alternate gene names: 161869092

Gene position: 79518-80243 (Clockwise)

Preceding gene: 161869091

Following gene: 161869093

Centisome position: 3.69

GC content: 42.84

Gene sequence:

>726_bases
ATGCGGGAAATTATCACCCGTTACGGTCGCAATAATATTGGCTTTTTATGGCTGTTTGTTGAGCCGTTGCTGATGACATT
CGTTATCGTCTTGATGTGGAAATTTTTAAAGGCAGACCGATATTCAACTTTGAATATTGTCGCATTTGCGATTACTGGCT
ATCCGATGTTGATGATGTGGCGTAATGCCTCAAAACGGGCAGTTGGGTCGATTTCTTCAAATGCCAGCTTGCTTTATCAC
CGCAATGTAAGAGTTTTGGATACCATCTTGGCGCGCATGATTTTGGAAATTGCTGGTGCAACCATTGCGCAGATTGTGAT
TATGGCGGTATTGATTGCGATTGGCTGGATTGAAATGCCGGCAGATATGTTTTATATGCTGATGGCTTGGCTTTTGATGG
CTTTTTTTGCGATTGGTTTGGGTTTGGTGATTTGTTCGATTGCCTTTAATTTCGAGCCGTTTGGCAAGATTTGGGGCACA
TTGACTTTTGTGATGATGCCGTTATCCGGTGCGTTCTTTTTTGTGCATAATTTGCCGCCCAAGGTACAAGAATATGCATT
AATGATTCCGATGGTGCATGGCACAGAAATGTTCCGTGCCGGATATTTTGGCAGCGATGTAATTACCTATGAAAATCCTT
GGTATATCGTATTGTGCAATCTGGTGTTGTTGTTGTTTGGCTTGGCGATGGTCAGTAAATTCAGTAAAGGAGTCGAGCCG
CAATGA

Upstream 100 bases:

>100_bases
CTGCCAGCATTCGTGAGCATAAAAACTGATGAAAGCCTTGCATAAAACATCATTTTGGGAATCTTTAGCCATTCAAAGGC
GCGTAATCGGTGCGCTGTTG

Downstream 100 bases:

>100_bases
TTTCAGTTGAACACGTTTCCAAACGCTATCTGACCCGCCAAGGTTGGCGGACAGTCTTGCACGATATTAGCTTCAAAATG
GAGAAGGGCGAGAAAATCGG

Product: capsule polysaccharide export inner-membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MREIITRYGRNNIGFLWLFVEPLLMTFVIVLMWKFLKADRYSTLNIVAFAITGYPMLMMWRNASKRAVGSISSNASLLYH
RNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFFAIGLGLVICSIAFNFEPFGKIWGT
LTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHGTEMFRAGYFGSDVITYENPWYIVLCNLVLLLFGLAMVSKFSKGVEP
Q

Sequences:

>Translated_241_residues
MREIITRYGRNNIGFLWLFVEPLLMTFVIVLMWKFLKADRYSTLNIVAFAITGYPMLMMWRNASKRAVGSISSNASLLYH
RNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFFAIGLGLVICSIAFNFEPFGKIWGT
LTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHGTEMFRAGYFGSDVITYENPWYIVLCNLVLLLFGLAMVSKFSKGVEP
Q
>Mature_241_residues
MREIITRYGRNNIGFLWLFVEPLLMTFVIVLMWKFLKADRYSTLNIVAFAITGYPMLMMWRNASKRAVGSISSNASLLYH
RNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFFAIGLGLVICSIAFNFEPFGKIWGT
LTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHGTEMFRAGYFGSDVITYENPWYIVLCNLVLLLFGLAMVSKFSKGVEP
Q

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the CtrB and CtrD proteins [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 27418; Mature: 27418

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS51012 ABC_TM2 ; PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
7.9 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
7.9 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREIITRYGRNNIGFLWLFVEPLLMTFVIVLMWKFLKADRYSTLNIVAFAITGYPMLMMW
CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHH
RNASKRAVGSISSNASLLYHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMP
HCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ADMFYMLMAWLLMAFFAIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCH
KVQEYALMIPMVHGTEMFRAGYFGSDVITYENPWYIVLCNLVLLLFGLAMVSKFSKGVEP
HHHHHHHHHHHHCCHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q
C
>Mature Secondary Structure
MREIITRYGRNNIGFLWLFVEPLLMTFVIVLMWKFLKADRYSTLNIVAFAITGYPMLMMW
CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHH
RNASKRAVGSISSNASLLYHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMP
HCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ADMFYMLMAWLLMAFFAIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCH
KVQEYALMIPMVHGTEMFRAGYFGSDVITYENPWYIVLCNLVLLLFGLAMVSKFSKGVEP
HHHHHHHHHHHHCCHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1659649; 10710307 [H]