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The map label for this gene is yccS [C]

Identifier: 161869067

GI number: 161869067

Start: 48750

End: 51002

Strand: Reverse

Name: yccS [C]

Synonym: NMCC_0050

Alternate gene names: 161869067

Gene position: 51002-48750 (Counterclockwise)

Preceding gene: 161869068

Following gene: 161869065

Centisome position: 2.37

GC content: 59.88

Gene sequence:

>2253_bases
ATGCCGTCTGAAAACCCCTGCCGTTTTCAGACGGCATCGCTTCATCATCCGCATCCGTGTGCTACACTTCATTTACCTCA
TAACAATAAATCCGACAAACCCATGAAAGCACTTCCGATCAAATCACTCCTCATCACCTCGCTTCCCGTTTTCGCCAGTG
TTTTTACCGCCGCCTCCATCGTCTGGCAGCTAGGCGAACCCAAGCTCGCCATGCCCTTCGTACTCGGCATCATCGCCGGC
GGCCTTGTCGATTTGGACAACCGCCTGACCGGACGGCTGAAAAACATCATCGCCACCGTCGCCCTGTTTACCCTCTCCTC
GCTCACGGCACAAAGTACCCTCGGCACAGGGCTGCCCTTCATCCTCGCCATGACCCTGATGACCTTCGGCTTTACCATTT
TAGGCGCGGTCGGGCTGAAATACCGCACCTTCGCCTTCGGCGCACTCGCCGTCGCCACCTACACCACACTTACCTACACC
CCCGAAACCTACTGGCTGACCAACCCCTTCATGATTTTATGCGGCACCGTACTGTACAGCACCGCCATCATCCTGTTCCA
AATCATCCTGCCCCACCGCCCCGTCCAAGAAAGCGTCGCCAACGCCTACGACGCACTCGGTGGCTACCTCGAAGCCAAAG
CCGACTTCTTCGACCCCGATGAGGCAGCCTGGATAGGCAACCGCCACATCGACCTCGCCATGAGCAACACCGGCGTCATC
ACCGCCTTCAACCAATGCCGTTCCGCCCTGTTTTACCGCCTTCGCGGCAAACACCGCCACCCGCGCACCGCCAAAATGCT
GCGCTACTACTTCGCCGCCCAAGACATACACGAACGTATCAGCTCCGCCCACGTCGACTACCAAGAGATGTCCGAAAAAT
TCAAAAACACCGACATCATCTTCCGCATCCACCGCCTGCTCGAAATGCAGGGACAAGCCTGCCGCAACACCGCCCAAGCC
CTGCGCGCAAGCAAAGACTACGTTTACAGCAAACGCCTCGGCCGCGCCATCGAAGGCTGCCGCCAGTCGCTGCGCCTCCT
TTCAGACAGCAACGACAATCCCGACATCCGCCACCTGCGCCGCCTTCTCGACAACCTCGGCAGCGTCGACCAGCAGTTCC
GCCAACTCCGACACAGCGACTCCCCCGCCGAAAACGACCGCATGGGCGACACCCGCATCGCCGCCCTCGAAACCGGCAGC
CTCAAAAACACCTGGCAGGCAATCCGTCCGCAGCTAAACCTCGAATCAGGCGTATTCCGCCATGCCGTCCGCCTGTCCCT
TGTCGTTGCCGCCGCCTGCACCATCGTCGAAGCCCTCAACCTCAACCTCGGCTACTGGATACTACTGACCGCCCTTTTCG
TCTGCCAACCCAACTACACCGCCACCAAAAGCCGCGTCCGCCAGCGCATCGCCGGTACCGTACTCGGCGTAATCGTCGGC
TCGCTCGTCCCCTACTTCACCCCGTCTGTCGAAACCAAACTCTGGATTGTCATCGCCAGTACCACCCTCTTTTTCATGAC
CCGCACCTACAAATACAGTTTCTCCACCTTCTTCATTACCATTCAAGCCCTGACCAGCCTCTCCCTCGCAGGTTTGGACG
TATACGCCGCCATGCCCGTACGCATCATCGACACCATTATCGGCGCATCCCTTGCCTGGGCGGCAGTCAGCTACCTGTGG
CCAGACTGGAAATACCTCACGCTCGAACGCACCGCCGCCCTTGCCGTATGCAGCAACGGCGCCTATCTCGAAAAAATCAC
CGAACGCCTCAAAAGCGGCGAAACCGGCGACGACGTCGAATACCGCGCCACCCGCCGCCGCGCCCACGAACACACCGCCG
CCCTCAGCAGCACCCTTTCCGACATGAGCAGCGAACCCGCAAAATTCGCCGACAGCCTGCAACCCGGCTTTACCCTGCTC
AAAACCGGCTACGCCCTGACCGGCTACATCTCCGCCCTCGGCGCATACCGCAGCGAAATGCACGAAGAATGCAGCCCCGA
CTTTACCGCACAGTTCCACCTCGCCGCCGAACACACCGCCCACATCTTCCAACACCTGCCCGAAACCGAACCCGACGACT
TTCAGACAGCACTGGATACACTGCGCGGCGAACTCGACACCCTCCGCACCCACAGCAGCGGAACACAAAGCCACATCCTC
CTCCAACAGCTCCAACTCATCGCCCGGCAGCTCGAACCCTACTACCGCGCCTACCGCCAAATTCCGCACAGGCAGCCCCA
AAATGCAGCCTGA

Upstream 100 bases:

>100_bases
GCGATTGCACATCCAACTGCACAAAGAAGGCAAAACGCCCGAACTCCTTTACGACAGGATTAACGACCTCAACCTCGTTT
CCTAATTGAAGAAACACCCG

Downstream 100 bases:

>100_bases
AAAAGTTTCGGCATTTTGTAAGAGAGGGCAGATTGTCAGACAGGTTGCAAGATAGTGGATAAGGCTTTGCGCAGGGTAAA
TGCGTAGCAACTGAACCGTC

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 750; Mature: 749

Protein sequence:

>750_residues
MPSENPCRFQTASLHHPHPCATLHLPHNNKSDKPMKALPIKSLLITSLPVFASVFTAASIVWQLGEPKLAMPFVLGIIAG
GLVDLDNRLTGRLKNIIATVALFTLSSLTAQSTLGTGLPFILAMTLMTFGFTILGAVGLKYRTFAFGALAVATYTTLTYT
PETYWLTNPFMILCGTVLYSTAIILFQIILPHRPVQESVANAYDALGGYLEAKADFFDPDEAAWIGNRHIDLAMSNTGVI
TAFNQCRSALFYRLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDIIFRIHRLLEMQGQACRNTAQA
LRASKDYVYSKRLGRAIEGCRQSLRLLSDSNDNPDIRHLRRLLDNLGSVDQQFRQLRHSDSPAENDRMGDTRIAALETGS
LKNTWQAIRPQLNLESGVFRHAVRLSLVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVRQRIAGTVLGVIVG
SLVPYFTPSVETKLWIVIASTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPVRIIDTIIGASLAWAAVSYLW
PDWKYLTLERTAALAVCSNGAYLEKITERLKSGETGDDVEYRATRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLL
KTGYALTGYISALGAYRSEMHEECSPDFTAQFHLAAEHTAHIFQHLPETEPDDFQTALDTLRGELDTLRTHSSGTQSHIL
LQQLQLIARQLEPYYRAYRQIPHRQPQNAA

Sequences:

>Translated_750_residues
MPSENPCRFQTASLHHPHPCATLHLPHNNKSDKPMKALPIKSLLITSLPVFASVFTAASIVWQLGEPKLAMPFVLGIIAG
GLVDLDNRLTGRLKNIIATVALFTLSSLTAQSTLGTGLPFILAMTLMTFGFTILGAVGLKYRTFAFGALAVATYTTLTYT
PETYWLTNPFMILCGTVLYSTAIILFQIILPHRPVQESVANAYDALGGYLEAKADFFDPDEAAWIGNRHIDLAMSNTGVI
TAFNQCRSALFYRLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDIIFRIHRLLEMQGQACRNTAQA
LRASKDYVYSKRLGRAIEGCRQSLRLLSDSNDNPDIRHLRRLLDNLGSVDQQFRQLRHSDSPAENDRMGDTRIAALETGS
LKNTWQAIRPQLNLESGVFRHAVRLSLVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVRQRIAGTVLGVIVG
SLVPYFTPSVETKLWIVIASTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPVRIIDTIIGASLAWAAVSYLW
PDWKYLTLERTAALAVCSNGAYLEKITERLKSGETGDDVEYRATRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLL
KTGYALTGYISALGAYRSEMHEECSPDFTAQFHLAAEHTAHIFQHLPETEPDDFQTALDTLRGELDTLRTHSSGTQSHIL
LQQLQLIARQLEPYYRAYRQIPHRQPQNAA
>Mature_749_residues
PSENPCRFQTASLHHPHPCATLHLPHNNKSDKPMKALPIKSLLITSLPVFASVFTAASIVWQLGEPKLAMPFVLGIIAGG
LVDLDNRLTGRLKNIIATVALFTLSSLTAQSTLGTGLPFILAMTLMTFGFTILGAVGLKYRTFAFGALAVATYTTLTYTP
ETYWLTNPFMILCGTVLYSTAIILFQIILPHRPVQESVANAYDALGGYLEAKADFFDPDEAAWIGNRHIDLAMSNTGVIT
AFNQCRSALFYRLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDIIFRIHRLLEMQGQACRNTAQAL
RASKDYVYSKRLGRAIEGCRQSLRLLSDSNDNPDIRHLRRLLDNLGSVDQQFRQLRHSDSPAENDRMGDTRIAALETGSL
KNTWQAIRPQLNLESGVFRHAVRLSLVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVRQRIAGTVLGVIVGS
LVPYFTPSVETKLWIVIASTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPVRIIDTIIGASLAWAAVSYLWP
DWKYLTLERTAALAVCSNGAYLEKITERLKSGETGDDVEYRATRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLLK
TGYALTGYISALGAYRSEMHEECSPDFTAQFHLAAEHTAHIFQHLPETEPDDFQTALDTLRGELDTLRTHSSGTQSHILL
QQLQLIARQLEPYYRAYRQIPHRQPQNAA

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=704, Percent_Identity=35.9375, Blast_Score=446, Evalue=1e-126,
Organism=Escherichia coli, GI87082248, Length=718, Percent_Identity=23.6768802228412, Blast_Score=119, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83759; Mature: 83628

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSENPCRFQTASLHHPHPCATLHLPHNNKSDKPMKALPIKSLLITSLPVFASVFTAASI
CCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHH
VWQLGEPKLAMPFVLGIIAGGLVDLDNRLTGRLKNIIATVALFTLSSLTAQSTLGTGLPF
HHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ILAMTLMTFGFTILGAVGLKYRTFAFGALAVATYTTLTYTPETYWLTNPFMILCGTVLYS
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEECCCCEEECCCHHHHHHHHHHH
TAIILFQIILPHRPVQESVANAYDALGGYLEAKADFFDPDEAAWIGNRHIDLAMSNTGVI
HHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHH
TAFNQCRSALFYRLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDII
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHH
FRIHRLLEMQGQACRNTAQALRASKDYVYSKRLGRAIEGCRQSLRLLSDSNDNPDIRHLR
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RLLDNLGSVDQQFRQLRHSDSPAENDRMGDTRIAALETGSLKNTWQAIRPQLNLESGVFR
HHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHH
HAVRLSLVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVRQRIAGTVLGVIVG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SLVPYFTPSVETKLWIVIASTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPV
HHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCHHHHHHHH
RIIDTIIGASLAWAAVSYLWPDWKYLTLERTAALAVCSNGAYLEKITERLKSGETGDDVE
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHH
YRATRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLLKTGYALTGYISALGAYRSEM
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHH
HEECSPDFTAQFHLAAEHTAHIFQHLPETEPDDFQTALDTLRGELDTLRTHSSGTQSHIL
HHHCCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LQQLQLIARQLEPYYRAYRQIPHRQPQNAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PSENPCRFQTASLHHPHPCATLHLPHNNKSDKPMKALPIKSLLITSLPVFASVFTAASI
CCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHH
VWQLGEPKLAMPFVLGIIAGGLVDLDNRLTGRLKNIIATVALFTLSSLTAQSTLGTGLPF
HHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ILAMTLMTFGFTILGAVGLKYRTFAFGALAVATYTTLTYTPETYWLTNPFMILCGTVLYS
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEECCCCEEECCCHHHHHHHHHHH
TAIILFQIILPHRPVQESVANAYDALGGYLEAKADFFDPDEAAWIGNRHIDLAMSNTGVI
HHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHH
TAFNQCRSALFYRLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDII
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHH
FRIHRLLEMQGQACRNTAQALRASKDYVYSKRLGRAIEGCRQSLRLLSDSNDNPDIRHLR
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
RLLDNLGSVDQQFRQLRHSDSPAENDRMGDTRIAALETGSLKNTWQAIRPQLNLESGVFR
HHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHH
HAVRLSLVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVRQRIAGTVLGVIVG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SLVPYFTPSVETKLWIVIASTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPV
HHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCHHHHHHHH
RIIDTIIGASLAWAAVSYLWPDWKYLTLERTAALAVCSNGAYLEKITERLKSGETGDDVE
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHH
YRATRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLLKTGYALTGYISALGAYRSEM
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHH
HEECSPDFTAQFHLAAEHTAHIFQHLPETEPDDFQTALDTLRGELDTLRTHSSGTQSHIL
HHHCCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LQQLQLIARQLEPYYRAYRQIPHRQPQNAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]