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The map label for this gene is pilE1 [H]

Identifier: 161869041

GI number: 161869041

Start: 19136

End: 19492

Strand: Reverse

Name: pilE1 [H]

Synonym: NMCC_0024

Alternate gene names: 161869041

Gene position: 19492-19136 (Counterclockwise)

Preceding gene: 161869042

Following gene: 161869040

Centisome position: 0.91

GC content: 51.54

Gene sequence:

>357_bases
GTGGGAATGACGGGATTTAATGATGCCGCCGGCGTGGCATCCTCCTCCGACATCAAAGGCAAATATGTTGAGAAAGTTGA
AGTCGCAAAAGGCGTCATTACCGCCACAATGCTTTCAACCGGCGTAAACAAAGAAATCCAAGGCAAAAAACTCTCCCTGT
GGGCCAAGCGTCAAGACGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTGAGCGCGCCGCCAAAGACGACACCATCAAA
GCCGCCACCGACACCACCACCAACATCAACACCAAGCACCTGCCGTCAACCTGCCGCAATGAATCAACTGCCGGTTGCAT
AGAAACACCACCTACGGCTTTCTATAAAAATACCTAA

Upstream 100 bases:

>100_bases
ACTTCGTCATTCCCGCGCAGGCGGGAATCTAGGTTTGTCGGCGCAGAAACTTATCGGGTAAAAAGGTTTCTCCAGTCCTG
AATCCTAGATTCCCACTTTC

Downstream 100 bases:

>100_bases
ACCGTCATTCCCACGAAAGTGGGAATCTAGGACGTAAAATCTAAAGAAACCGTTTTCCCGATAAGTTTCCGTGCCGACGA
GGCTGGATTCCCGCCTGCGC

Product: pilS cassette

Products: NA

Alternate protein names: L-pilin [H]

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MGMTGFNDAAGVASSSDIKGKYVEKVEVAKGVITATMLSTGVNKEIQGKKLSLWAKRQDGSVKWFCGQPVERAAKDDTIK
AATDTTTNINTKHLPSTCRNESTAGCIETPPTAFYKNT

Sequences:

>Translated_118_residues
MGMTGFNDAAGVASSSDIKGKYVEKVEVAKGVITATMLSTGVNKEIQGKKLSLWAKRQDGSVKWFCGQPVERAAKDDTIK
AATDTTTNINTKHLPSTCRNESTAGCIETPPTAFYKNT
>Mature_117_residues
GMTGFNDAAGVASSSDIKGKYVEKVEVAKGVITATMLSTGVNKEIQGKKLSLWAKRQDGSVKWFCGQPVERAAKDDTIKA
ATDTTTNINTKHLPSTCRNESTAGCIETPPTAFYKNT

Specific function: This protein is the predominant Neisseria surface antigen, which allows adhesion of the bacterium to various host cells [H]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001082
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]

EC number: NA

Molecular weight: Translated: 12617; Mature: 12486

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMTGFNDAAGVASSSDIKGKYVEKVEVAKGVITATMLSTGVNKEIQGKKLSLWAKRQDG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCC
SVKWFCGQPVERAAKDDTIKAATDTTTNINTKHLPSTCRNESTAGCIETPPTAFYKNT
CEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
>Mature Secondary Structure 
GMTGFNDAAGVASSSDIKGKYVEKVEVAKGVITATMLSTGVNKEIQGKKLSLWAKRQDG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCC
SVKWFCGQPVERAAKDDTIKAATDTTTNINTKHLPSTCRNESTAGCIETPPTAFYKNT
CEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1906968 [H]