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The map label for this gene is ycbC [C]

Identifier: 161869022

GI number: 161869022

Start: 2428

End: 3084

Strand: Reverse

Name: ycbC [C]

Synonym: NMCC_0004

Alternate gene names: 161869022

Gene position: 3084-2428 (Counterclockwise)

Preceding gene: 161869023

Following gene: 161869021

Centisome position: 0.14

GC content: 55.86

Gene sequence:

>657_bases
GTGAACAAACGGCTGTTTTGCAGCCGCAACGGCTTGCGCTATTACCTGTTGGGCGGTTTCTGTTTGAGTGTTTTTCCGCT
TTTGCTGGTGTTTGCCTCATCCGTTTGGGCGGTTTATCGGACGGGCGGGCAGGTTTTGCCGCCGTATGTCCGGGCGGATG
CCGCGCTGGTGTTGGGCGCCGCCGCGTGGGACAAACGCCCTTCCCCGGTTTTCCGCGAACGCATCAACCACGCCATCGCG
CTTTATCAGAGCCGCAGGGTAGGCAAAATCGTGTTTACGGGAGGACGAACCAAAAAAGGCTATATGACCGAAGCCGAGGT
CGGGCGGCGGTACGCGCTCAAACAGGGGGTTCCGGCGCGCAACATCCTGTTTGAAAACACTTCGCGCAACACTTATGAAA
ACCTGAACAACATCCGTCCGGTTTTGCGTGCCAACGGTATTGCCAGCGTGGTGATTGTCAGCGATCCCTACCATTTGGCG
CGGGCGGCGGAAATGGCGGAGGATTTGGGTGTCCGCGTTTATATGTCTGCCACCCCGACCACGCGGTTTGATGCGGGAAA
TAAGAAAAAAATCTTTATGCTGCAAGAGGGATATGCGTTATCCCTCTACCGTTTGGAAAAATGGGGCAGCCGCTTTTTGG
GATGGCTGTCTGATTGA

Upstream 100 bases:

>100_bases
GTGCCATCGCCGATCATCCCGCCCTGTTGGAGCGTCCGATTGTTTTGGCAAACGGTAAGGCGGCTGTCGGCAGACCGCTG
GAAAATATCGAAGCGGTATT

Downstream 100 bases:

>100_bases
AGCGGTAGAAAATGCCGTCTGAAACTTATCCGCAGGCAGGGTTCGGACGGCATTTTTGATGCCCAAGCACGGTAAAAACA
GTAAAATAAGCCGTTTTAAA

Product: periplasmic protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNKRLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGAAAWDKRPSPVFRERINHAIA
LYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLA
RAAEMAEDLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGSRFLGWLSD

Sequences:

>Translated_218_residues
MNKRLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGAAAWDKRPSPVFRERINHAIA
LYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLA
RAAEMAEDLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGSRFLGWLSD
>Mature_218_residues
MNKRLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGAAAWDKRPSPVFRERINHAIA
LYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLA
RAAEMAEDLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGSRFLGWLSD

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24580; Mature: 24580

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA
CCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHEEEEE
AAWDKRPSPVFRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPAR
HHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHH
NILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSATPT
HEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHCCEEEEEECCCC
TRFDAGNKKKIFMLQEGYALSLYRLEKWGSRFLGWLSD
EEECCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKRLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQVLPPYVRADAALVLGA
CCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHEEEEE
AAWDKRPSPVFRERINHAIALYQSRRVGKIVFTGGRTKKGYMTEAEVGRRYALKQGVPAR
HHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHH
NILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLARAAEMAEDLGVRVYMSATPT
HEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHCCEEEEEECCCC
TRFDAGNKKKIFMLQEGYALSLYRLEKWGSRFLGWLSD
EEECCCCCEEEEEEECCCEEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA