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The map label for this gene is ntrY [H]

Identifier: 161526287

GI number: 161526287

Start: 3404308

End: 3406761

Strand: Reverse

Name: ntrY [H]

Synonym: Bmul_3118

Alternate gene names: 161526287

Gene position: 3406761-3404308 (Counterclockwise)

Preceding gene: 161526288

Following gene: 161526286

Centisome position: 98.79

GC content: 67.11

Gene sequence:

>2454_bases
GTGCTAAATAAAGTGCGCCGCGCGACGAGCGGAAAGAGCCTCCTCATACGCGTGATCGTGTCGACCGTCGCGATCACCGC
GCTGCTGCTGCTCGTGCTGCTCGCGGCCGCGAGCGCGAACACCGAATTCTTCGATCGCTACTACTCGTGGCTGTACGCGG
CGAACATCATCGTCGCGCTCGTGTTCCTGCTCGTCGTGCTCGGGCTGATCGGGATGATCGTCGTGCGCCTGAGGAAGGGC
AAGTTCGGCACGCGGCTGCTCGCGAAGCTCGCGATCTTCTTCGCGCTCGTCGGCGTCGTGCCGGGCGGCATCATCTACAT
CGTGTCGTACCAGTTCGTGTCGCGCAGCATCGAGTCGTGGTTCGACGTGAACGTCGAAACCGCGCTGACGGCCGGCCTGA
ATCTCGGCCGCGGCATGCTCGACGCGTCGCTGTCCGATCTGCAGACGAAGGCGCGCTTGATGTCGGATCAGCTCGCGAGC
GTCGATGCGAACACGAACGGCACGACGCTCACGCTGCTGCGTCTGCGCGACCAGTTCGGCGTGCAGGACGCGACGATCGT
CGAGCCGAGCCGCGGCGGCTCGGGTGCGTCGCCCGATCTGCATATCGTCGCGCAGGCGTCGGGCAATTTCGCGGCGCTGA
TTCCGGACGATTTGCCGACGCCGCTGATGCTGAGCCAGGCGCGCGAGCACGGCGCATATGCGGCGATCGAGGGCGAAGTC
GACGGCGATCCGCGCGCGCACGGCGCGAAAGGCGCGCTGCGGCTGCGCGTCGTGCGGCCGATTCCGGACGCGACGACGTC
GATGCTGCAGCCGGCCGAACGCTTCCTGCAGCTCACGCAGCCCGTGCCGCCGACGCTCGCGCACAACGCGGACGCCGTCC
AGCGCGCCTATCGCGAGTATCAGGAGAAATCGCTCGGCCGCACGGGGCTGCGCAAGATGTACATCGGCACGCTGACGCTC
GCGCTGTTCCTCGCGACCTTCATCGCGATGATGCTGGCGCTCGCGCTCGGCCAGCAGCTTGCGCGGCCGCTGTTCCTGCT
CGCGCAGGGCACGAAGGAAGTCGCCGAAGGCGACTACACGCCGAAGCGCGAGATCAAGACGCGCGACGAGCTCGGTTTCC
TCACGCAGTCGTTCAACGCGATGACGCGCCAGCTGTCCGAGGCGCGGCTCGCGGTCGAGAAGAACCGGATCGCGCTCGAG
CATTCGAAGGCCTATCTCGAAAGCATTCTGGCGAACCTGACGGCCGGCGTGTTCGTGCTCGACCGCCAGTTCCGGCTGAC
GACGGCCAACCGCGGCGCCGAGCGCATCTTCCGGCAGCCGTTCAATTCGCTGATCGGCACGACGCTCGACCAGATCGGCG
TCGTCGCCGGGTTCGGCGCGATGGTGCGCAAGGCGTTCGCGGATCGCGAGGCGGCGTCCGACAGCGGCAGCGGCGATACC
GGCCACTGGCAGCAGCAGTTCGCGGTCGAAGTGCCGGGCGAGACCGATCCGCTGACGCTGCTCGTGCGCGGCACGCGGCT
CGTGTCGACGGTCGAAGGGCAGGCCGACGATCCGCAGACGTCGGGCTACGTCGTCGTGTTCGACGACATCTCCGACGTGA
TTTCCGCGCAGCGCTCGGTCGCGTGGGGCGAGGTGGCGCGCCGGCTCGCGCACGAGATCAAGAACCCGCTGACGCCGATC
CAGCTGTCGGCCGAACGGCTGCAGATGAAGCTGTCGGACAAGCTCGCGCCGCACGACGCGGACGTGCTCAAGCGCGGCGC
GACGATGATCGTCAACCAGGTGGCCGCGATGAAGCGGATGGTCGACGACTTCCGCGAATACGCACGCACGCCGCCGGCCG
TGCTCGCGAACCTGCAACTGAACGATCTGGTGAGCGAAGTGTTGGGGCTGTACGGCGTCGGCGAAGGCAAGAATCCGATC
GTCGTCGAGCTCGCGCCGTCGCTGCCGGTGATTCGCGGCGATGCGACGCAACTGCGTCAGGTGATACACAACCTGCTGCA
GAACGCGCAGGATTCGGTCGCGGAGTCCGAGCATCCGCGTGTGTTGATCGAAACCAAGACAGTAGAATATGGCGACCCCG
ACGCCGAGGGCAAAACGCGCGTCGCGGTTCGTCTTACCGTGTCCGACAACGGGCCCGGTTTCCCGGCGCGCATCCTGACG
CGCGCGTTCGAGCCTTACGTGACGACGAAGGCGAAGGGTACGGGGCTCGGGTTGGCCACGGTCAAGAAGATCGTCGACGA
GCATGGCGCGCGGATCGATCTGCGCAATCGCATGCACGGCGAGACCGTCGAAGGTGCGCAGGTGTCGATCCTGTTCCTGC
AGATGGCGAGCGATGCGCCGAATGCGGGGCCCGACGGAGCGGCGCCCGCGGCGGCGTCGGCCGCCGGCAAGCCGGCCGCC
GGACGGTCGGCCTCGACGAAGACAAAAGCAAGTGAGCAGACAAAGGCAGCGTAA

Upstream 100 bases:

>100_bases
ACGGCGCTGATGCCGAAGCCGTTCCAGGTCGACGCGGTGAACAACCGCGACTGGACGCTCGCCTCGGACTGGAAGCGCTT
TACGTTCACGGTGGCCGAAC

Downstream 100 bases:

>100_bases
ATGGCAACCATCCTGGTGGTAGATGATGAAATGGGCATCCGGGAATTGCTCTCGGAGATCCTCAGCGACGAAGGACACGT
CGTCGAGGCGGCGGAGAACG

Product: multi-sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 817; Mature: 817

Protein sequence:

>817_residues
MLNKVRRATSGKSLLIRVIVSTVAITALLLLVLLAAASANTEFFDRYYSWLYAANIIVALVFLLVVLGLIGMIVVRLRKG
KFGTRLLAKLAIFFALVGVVPGGIIYIVSYQFVSRSIESWFDVNVETALTAGLNLGRGMLDASLSDLQTKARLMSDQLAS
VDANTNGTTLTLLRLRDQFGVQDATIVEPSRGGSGASPDLHIVAQASGNFAALIPDDLPTPLMLSQAREHGAYAAIEGEV
DGDPRAHGAKGALRLRVVRPIPDATTSMLQPAERFLQLTQPVPPTLAHNADAVQRAYREYQEKSLGRTGLRKMYIGTLTL
ALFLATFIAMMLALALGQQLARPLFLLAQGTKEVAEGDYTPKREIKTRDELGFLTQSFNAMTRQLSEARLAVEKNRIALE
HSKAYLESILANLTAGVFVLDRQFRLTTANRGAERIFRQPFNSLIGTTLDQIGVVAGFGAMVRKAFADREAASDSGSGDT
GHWQQQFAVEVPGETDPLTLLVRGTRLVSTVEGQADDPQTSGYVVVFDDISDVISAQRSVAWGEVARRLAHEIKNPLTPI
QLSAERLQMKLSDKLAPHDADVLKRGATMIVNQVAAMKRMVDDFREYARTPPAVLANLQLNDLVSEVLGLYGVGEGKNPI
VVELAPSLPVIRGDATQLRQVIHNLLQNAQDSVAESEHPRVLIETKTVEYGDPDAEGKTRVAVRLTVSDNGPGFPARILT
RAFEPYVTTKAKGTGLGLATVKKIVDEHGARIDLRNRMHGETVEGAQVSILFLQMASDAPNAGPDGAAPAAASAAGKPAA
GRSASTKTKASEQTKAA

Sequences:

>Translated_817_residues
MLNKVRRATSGKSLLIRVIVSTVAITALLLLVLLAAASANTEFFDRYYSWLYAANIIVALVFLLVVLGLIGMIVVRLRKG
KFGTRLLAKLAIFFALVGVVPGGIIYIVSYQFVSRSIESWFDVNVETALTAGLNLGRGMLDASLSDLQTKARLMSDQLAS
VDANTNGTTLTLLRLRDQFGVQDATIVEPSRGGSGASPDLHIVAQASGNFAALIPDDLPTPLMLSQAREHGAYAAIEGEV
DGDPRAHGAKGALRLRVVRPIPDATTSMLQPAERFLQLTQPVPPTLAHNADAVQRAYREYQEKSLGRTGLRKMYIGTLTL
ALFLATFIAMMLALALGQQLARPLFLLAQGTKEVAEGDYTPKREIKTRDELGFLTQSFNAMTRQLSEARLAVEKNRIALE
HSKAYLESILANLTAGVFVLDRQFRLTTANRGAERIFRQPFNSLIGTTLDQIGVVAGFGAMVRKAFADREAASDSGSGDT
GHWQQQFAVEVPGETDPLTLLVRGTRLVSTVEGQADDPQTSGYVVVFDDISDVISAQRSVAWGEVARRLAHEIKNPLTPI
QLSAERLQMKLSDKLAPHDADVLKRGATMIVNQVAAMKRMVDDFREYARTPPAVLANLQLNDLVSEVLGLYGVGEGKNPI
VVELAPSLPVIRGDATQLRQVIHNLLQNAQDSVAESEHPRVLIETKTVEYGDPDAEGKTRVAVRLTVSDNGPGFPARILT
RAFEPYVTTKAKGTGLGLATVKKIVDEHGARIDLRNRMHGETVEGAQVSILFLQMASDAPNAGPDGAAPAAASAAGKPAA
GRSASTKTKASEQTKAA
>Mature_817_residues
MLNKVRRATSGKSLLIRVIVSTVAITALLLLVLLAAASANTEFFDRYYSWLYAANIIVALVFLLVVLGLIGMIVVRLRKG
KFGTRLLAKLAIFFALVGVVPGGIIYIVSYQFVSRSIESWFDVNVETALTAGLNLGRGMLDASLSDLQTKARLMSDQLAS
VDANTNGTTLTLLRLRDQFGVQDATIVEPSRGGSGASPDLHIVAQASGNFAALIPDDLPTPLMLSQAREHGAYAAIEGEV
DGDPRAHGAKGALRLRVVRPIPDATTSMLQPAERFLQLTQPVPPTLAHNADAVQRAYREYQEKSLGRTGLRKMYIGTLTL
ALFLATFIAMMLALALGQQLARPLFLLAQGTKEVAEGDYTPKREIKTRDELGFLTQSFNAMTRQLSEARLAVEKNRIALE
HSKAYLESILANLTAGVFVLDRQFRLTTANRGAERIFRQPFNSLIGTTLDQIGVVAGFGAMVRKAFADREAASDSGSGDT
GHWQQQFAVEVPGETDPLTLLVRGTRLVSTVEGQADDPQTSGYVVVFDDISDVISAQRSVAWGEVARRLAHEIKNPLTPI
QLSAERLQMKLSDKLAPHDADVLKRGATMIVNQVAAMKRMVDDFREYARTPPAVLANLQLNDLVSEVLGLYGVGEGKNPI
VVELAPSLPVIRGDATQLRQVIHNLLQNAQDSVAESEHPRVLIETKTVEYGDPDAEGKTRVAVRLTVSDNGPGFPARILT
RAFEPYVTTKAKGTGLGLATVKKIVDEHGARIDLRNRMHGETVEGAQVSILFLQMASDAPNAGPDGAAPAAASAAGKPAA
GRSASTKTKASEQTKAA

Specific function: Member of the two-component regulatory system ntrY/ntrX involved in nitrogen level control. Probably activates ntrX by phosphorylation [H]

COG id: COG5000

COG function: function code T; Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=403, Percent_Identity=25.8064516129032, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI1790300, Length=355, Percent_Identity=25.0704225352113, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1790436, Length=222, Percent_Identity=31.0810810810811, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI1786912, Length=221, Percent_Identity=29.8642533936652, Blast_Score=67, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR017232 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 88020; Mature: 88020

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKVRRATSGKSLLIRVIVSTVAITALLLLVLLAAASANTEFFDRYYSWLYAANIIVAL
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VFLLVVLGLIGMIVVRLRKGKFGTRLLAKLAIFFALVGVVPGGIIYIVSYQFVSRSIESW
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHH
FDVNVETALTAGLNLGRGMLDASLSDLQTKARLMSDQLASVDANTNGTTLTLLRLRDQFG
HCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHC
VQDATIVEPSRGGSGASPDLHIVAQASGNFAALIPDDLPTPLMLSQAREHGAYAAIEGEV
CCCCEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHHCCCEEEEECCC
DGDPRAHGAKGALRLRVVRPIPDATTSMLQPAERFLQLTQPVPPTLAHNADAVQRAYREY
CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHH
QEKSLGRTGLRKMYIGTLTLALFLATFIAMMLALALGQQLARPLFLLAQGTKEVAEGDYT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
PKREIKTRDELGFLTQSFNAMTRQLSEARLAVEKNRIALEHSKAYLESILANLTAGVFVL
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEEE
DRQFRLTTANRGAERIFRQPFNSLIGTTLDQIGVVAGFGAMVRKAFADREAASDSGSGDT
ECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GHWQQQFAVEVPGETDPLTLLVRGTRLVSTVEGQADDPQTSGYVVVFDDISDVISAQRSV
CCCCCEEEEECCCCCCCEEEEEECCHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHH
AWGEVARRLAHEIKNPLTPIQLSAERLQMKLSDKLAPHDADVLKRGATMIVNQVAAMKRM
HHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHH
VDDFREYARTPPAVLANLQLNDLVSEVLGLYGVGEGKNPIVVELAPSLPVIRGDATQLRQ
HHHHHHHHCCCCHHEECCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCHHHHHH
VIHNLLQNAQDSVAESEHPRVLIETKTVEYGDPDAEGKTRVAVRLTVSDNGPGFPARILT
HHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCHHHHHH
RAFEPYVTTKAKGTGLGLATVKKIVDEHGARIDLRNRMHGETVEGAQVSILFLQMASDAP
HHHCCCEECCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCC
NAGPDGAAPAAASAAGKPAAGRSASTKTKASEQTKAA
CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MLNKVRRATSGKSLLIRVIVSTVAITALLLLVLLAAASANTEFFDRYYSWLYAANIIVAL
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VFLLVVLGLIGMIVVRLRKGKFGTRLLAKLAIFFALVGVVPGGIIYIVSYQFVSRSIESW
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHH
FDVNVETALTAGLNLGRGMLDASLSDLQTKARLMSDQLASVDANTNGTTLTLLRLRDQFG
HCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHC
VQDATIVEPSRGGSGASPDLHIVAQASGNFAALIPDDLPTPLMLSQAREHGAYAAIEGEV
CCCCEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHHCCCEEEEECCC
DGDPRAHGAKGALRLRVVRPIPDATTSMLQPAERFLQLTQPVPPTLAHNADAVQRAYREY
CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHH
QEKSLGRTGLRKMYIGTLTLALFLATFIAMMLALALGQQLARPLFLLAQGTKEVAEGDYT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
PKREIKTRDELGFLTQSFNAMTRQLSEARLAVEKNRIALEHSKAYLESILANLTAGVFVL
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEEE
DRQFRLTTANRGAERIFRQPFNSLIGTTLDQIGVVAGFGAMVRKAFADREAASDSGSGDT
ECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GHWQQQFAVEVPGETDPLTLLVRGTRLVSTVEGQADDPQTSGYVVVFDDISDVISAQRSV
CCCCCEEEEECCCCCCCEEEEEECCHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHH
AWGEVARRLAHEIKNPLTPIQLSAERLQMKLSDKLAPHDADVLKRGATMIVNQVAAMKRM
HHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHH
VDDFREYARTPPAVLANLQLNDLVSEVLGLYGVGEGKNPIVVELAPSLPVIRGDATQLRQ
HHHHHHHHCCCCHHEECCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCHHHHHH
VIHNLLQNAQDSVAESEHPRVLIETKTVEYGDPDAEGKTRVAVRLTVSDNGPGFPARILT
HHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCHHHHHH
RAFEPYVTTKAKGTGLGLATVKKIVDEHGARIDLRNRMHGETVEGAQVSILFLQMASDAP
HHHCCCEECCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCC
NAGPDGAAPAAASAAGKPAAGRSASTKTKASEQTKAA
CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1661370 [H]