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The map label for this gene is dppC [H]

Identifier: 161526207

GI number: 161526207

Start: 3320586

End: 3321503

Strand: Reverse

Name: dppC [H]

Synonym: Bmul_3038

Alternate gene names: 161526207

Gene position: 3321503-3320586 (Counterclockwise)

Preceding gene: 161526208

Following gene: 161526206

Centisome position: 96.32

GC content: 68.63

Gene sequence:

>918_bases
ATGAGCAATCTGCAAAACACCCTGCCGAGCGAATCCGCGCCGGCCGGCGGCCGTGCGCTCGCGCTGCGCGAGTTCTGGGC
CAACTTCTCGCGCAACCGCGGCGCCGTCGGCGCCGGCATCGTCGTGCTGGTGCTGATCGCGGTCGCGATTTTCGCGCCGC
TGATCGCGCCGCACAGCCCGGTCGAGCAATACCGCGACTACGTGAAGATTCCGCCCGCGTGGCTCGACGGCGGCAACCGC
CAGTTCATCCTCGGCACCGATGAAGCGGGCCGCGACATTCTTTCGCGCCTGATGTTCGGCGCGCGCATGTCGTTCTGGAT
CGGCTTCGTGTCGGTCGTGCTCGCGCTGATCCCCGGCATCGTGCTCGGCCTCGTCGCCGCGTTTTTCCAGAAGTGGGCCG
ACACGGCCGTGATGCGCATCATGGACGTGCTGCTCGCGCTGCCGTCGCTGCTGCTCGCGGTCGCGGTCGTCGCGATCATC
GGGCCGGGGCTCACGAATACGATGTTCGCGATCGCGATCGTCGCGCTGCCCGCCTACGTGCGTCTGACGCGCGCGTCCGC
GCTCGGCGAGCTGCAGAAGGAATACGTGACCGCCTCGCGCGTGGCCGGCGCCGGCACGCTGCGCCTGATGTTCTCGCAGG
TGCTGCCGAACTGCACGGCGCCGCTGATCGTGCAGGCGACGCTCGGTTTCTCGTCGGCGATTCTCGATGCGGCCGCGCTC
GGCTTCCTCGGTCTCGGCGTGCAGCCGCCGACCGCCGAGTGGGGCGCAATGCTCGCCTCCGCGCGCGACTACATCGACAA
CGCCTGGTGGATCGTCACGATGCCGGGCCTGTCGATCCTGATCTCGGTGCTCGCGATCAACCTGCTCGGCGACGGGCTGC
GCGACGCGCTCGATCCCAAACTGAAACGGATGGCGTGA

Upstream 100 bases:

>100_bases
CGGCATTCTGCTGATCGCGACGCTCGTGATCGTCGTGAACCTGATCGTCGACCTGCTGTACGGCGTGCTGAATCCGCGCA
TCCGCCACACGAGGTAATCC

Downstream 100 bases:

>100_bases
CATGACTTCGAATCTACTGACCATCCGCAATCTCGCGGTGAACTTCAACGGCCTGCCCGCGGTCGACCGGATCAACCTGT
CGATCGCGCCGGGCGAGGTG

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSNLQNTLPSESAPAGGRALALREFWANFSRNRGAVGAGIVVLVLIAVAIFAPLIAPHSPVEQYRDYVKIPPAWLDGGNR
QFILGTDEAGRDILSRLMFGARMSFWIGFVSVVLALIPGIVLGLVAAFFQKWADTAVMRIMDVLLALPSLLLAVAVVAII
GPGLTNTMFAIAIVALPAYVRLTRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAAL
GFLGLGVQPPTAEWGAMLASARDYIDNAWWIVTMPGLSILISVLAINLLGDGLRDALDPKLKRMA

Sequences:

>Translated_305_residues
MSNLQNTLPSESAPAGGRALALREFWANFSRNRGAVGAGIVVLVLIAVAIFAPLIAPHSPVEQYRDYVKIPPAWLDGGNR
QFILGTDEAGRDILSRLMFGARMSFWIGFVSVVLALIPGIVLGLVAAFFQKWADTAVMRIMDVLLALPSLLLAVAVVAII
GPGLTNTMFAIAIVALPAYVRLTRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAAL
GFLGLGVQPPTAEWGAMLASARDYIDNAWWIVTMPGLSILISVLAINLLGDGLRDALDPKLKRMA
>Mature_304_residues
SNLQNTLPSESAPAGGRALALREFWANFSRNRGAVGAGIVVLVLIAVAIFAPLIAPHSPVEQYRDYVKIPPAWLDGGNRQ
FILGTDEAGRDILSRLMFGARMSFWIGFVSVVLALIPGIVLGLVAAFFQKWADTAVMRIMDVLLALPSLLLAVAVVAIIG
PGLTNTMFAIAIVALPAYVRLTRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAALG
FLGLGVQPPTAEWGAMLASARDYIDNAWWIVTMPGLSILISVLAINLLGDGLRDALDPKLKRMA

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789964, Length=282, Percent_Identity=59.2198581560284, Blast_Score=305, Evalue=2e-84,
Organism=Escherichia coli, GI1787054, Length=280, Percent_Identity=43.5714285714286, Blast_Score=226, Evalue=1e-60,
Organism=Escherichia coli, GI1787549, Length=293, Percent_Identity=44.7098976109215, Blast_Score=213, Evalue=1e-56,
Organism=Escherichia coli, GI1787760, Length=265, Percent_Identity=43.3962264150943, Blast_Score=211, Evalue=3e-56,
Organism=Escherichia coli, GI1789889, Length=230, Percent_Identity=40.8695652173913, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1787498, Length=297, Percent_Identity=30.976430976431, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1788505, Length=226, Percent_Identity=25.6637168141593, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32380; Mature: 32249

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLQNTLPSESAPAGGRALALREFWANFSRNRGAVGAGIVVLVLIAVAIFAPLIAPHSP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
VEQYRDYVKIPPAWLDGGNRQFILGTDEAGRDILSRLMFGARMSFWIGFVSVVLALIPGI
HHHHHHHHCCCCHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGLVAAFFQKWADTAVMRIMDVLLALPSLLLAVAVVAIIGPGLTNTMFAIAIVALPAYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RLTRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAAL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHH
GFLGLGVQPPTAEWGAMLASARDYIDNAWWIVTMPGLSILISVLAINLLGDGLRDALDPK
HHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCHH
LKRMA
HHHCC
>Mature Secondary Structure 
SNLQNTLPSESAPAGGRALALREFWANFSRNRGAVGAGIVVLVLIAVAIFAPLIAPHSP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
VEQYRDYVKIPPAWLDGGNRQFILGTDEAGRDILSRLMFGARMSFWIGFVSVVLALIPGI
HHHHHHHHCCCCHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGLVAAFFQKWADTAVMRIMDVLLALPSLLLAVAVVAIIGPGLTNTMFAIAIVALPAYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RLTRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAAL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHH
GFLGLGVQPPTAEWGAMLASARDYIDNAWWIVTMPGLSILISVLAINLLGDGLRDALDPK
HHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCHH
LKRMA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]