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The map label for this gene is ybjT [C]

Identifier: 161526197

GI number: 161526197

Start: 3309830

End: 3310789

Strand: Reverse

Name: ybjT [C]

Synonym: Bmul_3028

Alternate gene names: 161526197

Gene position: 3310789-3309830 (Counterclockwise)

Preceding gene: 161526198

Following gene: 161526196

Centisome position: 96.01

GC content: 71.88

Gene sequence:

>960_bases
ATGGATGGCCAGACCGTCGCGCTGCTGGGCGGCACCGGCTTTATCGGCAGCCGGCTCGTCGCAGCGCTGATCGATGCCGG
CAAGCACGTCCGGATCGGCACGCGCCGTCGCGAGCACGCGCGCCATCTGTCGATGCTGCCGGTCGACATCGTCGAGCTCG
AGACGTTCGACACGCGTTCGCTCGCGCGCTTCGTCGCCGGCGCGCAGGCGGCCGTCAATCTGGTCGGCGTGCTGCACGGC
GGCCGCGGCACGCCGTACGGCGCCGGCTTCGAGCGCGCGCACGTCGCGCTGCCGGCCGCGCTCGCGCGCGCGTGCGTCGA
AGCCGGTGTGCGGCGCGTGCTGCACATGAGTGCGCTCGGCGCCGATTCGCACGGGCCGAGCATGTATCAGCGCTCGAAAG
GCGACGGCGAGGCCGCGCTGCACGCGATCGCCGCGACCGAGCCGCTCGCGGTGACGATCTTTCGTCCCTCGGTCGTGTTC
GGGCCCGGCGATGCGTTTCTCAATACGTTCGCGCGGCTGCAGCGCATCGCGCCGGTGCTGCCGCTCGCGATGCCCGACGC
GCGCTTTCAGCCGGTATTCGTCGGCGACGTCGTGCGCGCGTTTGTCAACACGCTCGAGCTGAGCGCCGCGCACGGGCGCA
CGTACGAACTGGGCGGGCCGACCGTCTACACGCTCGAGCAGCTGGTGCGCTACTGCGGCACGCTGGTGGGCCGGCAGGCA
CGCATCGTGCGGCTGCCCGACGCGCTCGCGCGGCTGCAGGCGCGCGTGTTCGAGTGTCTGCCCGGCGAGCCCGTGATCAC
GCGCGACAATCTCGCATCGATGTCGGTGCCGAACGTGCTGTCGGGGCCGCTCGCGCCGGAACTCGGCATCGTGCCCGCGA
GTCTCGAAAGCATCGCACCGGCCTATCTCGGCGACGCCGCGCAGCGCTCGCGATTCGAAGCGTTCCGCTCGCGCCGCTAG

Upstream 100 bases:

>100_bases
CCGCAGTCGTTGAAGAAACGGCTGGGCATGATCTCGCCCTGATCCGCAACCTTCACACTGCCGCGCACGACGCGGCAGTG
TCCTTTTTGAGGTTCCGACC

Downstream 100 bases:

>100_bases
CGCGGCGTCGGCGGCGCGCCCATCCCCGTTTTCACTTTCGCGCTTTTCGGAAGACCATCATGAAACTCGTCATTGGTGAC
AAGAACTACTCGTCGTGGTC

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NADH-Ubiquinone Oxidoreductase Subunit; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Dtdp-Glucose-46-Dehydratase; NADH-Ubiquinone Oxireductase; NADH Dehydrogenase/Oxidoreductase-Like Protein; NADH-Ubiquinone Oxidoreductase Family Protein; NmrA Family Protein; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; Oxidoreductase Protein; Male Sterility-Like Protein; NDP-Sugar Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerases; Helix-Loop-Helix Dimerization Domain Signature Protein; NADH Dehydrogenase 1 Alpha Subcomplex; Dehydrogenase; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; NADH Dehydrogenase Subunit; Homolog NADH Dehydrogenase; NADH Dehydrogenase-Like Protein; NAD Dependent Epimerase; Nucleoside-Diphosphate Sugar Epimerase; NADH-Ubiquinone Oxidoreductase -Like Protein; NADH-Ubiquinone Oxidoreductase Putativ; NADH-Quinone Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase; LOW QUALITY PROTEIN Oxidoreductase

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MDGQTVALLGGTGFIGSRLVAALIDAGKHVRIGTRRREHARHLSMLPVDIVELETFDTRSLARFVAGAQAAVNLVGVLHG
GRGTPYGAGFERAHVALPAALARACVEAGVRRVLHMSALGADSHGPSMYQRSKGDGEAALHAIAATEPLAVTIFRPSVVF
GPGDAFLNTFARLQRIAPVLPLAMPDARFQPVFVGDVVRAFVNTLELSAAHGRTYELGGPTVYTLEQLVRYCGTLVGRQA
RIVRLPDALARLQARVFECLPGEPVITRDNLASMSVPNVLSGPLAPELGIVPASLESIAPAYLGDAAQRSRFEAFRSRR

Sequences:

>Translated_319_residues
MDGQTVALLGGTGFIGSRLVAALIDAGKHVRIGTRRREHARHLSMLPVDIVELETFDTRSLARFVAGAQAAVNLVGVLHG
GRGTPYGAGFERAHVALPAALARACVEAGVRRVLHMSALGADSHGPSMYQRSKGDGEAALHAIAATEPLAVTIFRPSVVF
GPGDAFLNTFARLQRIAPVLPLAMPDARFQPVFVGDVVRAFVNTLELSAAHGRTYELGGPTVYTLEQLVRYCGTLVGRQA
RIVRLPDALARLQARVFECLPGEPVITRDNLASMSVPNVLSGPLAPELGIVPASLESIAPAYLGDAAQRSRFEAFRSRR
>Mature_319_residues
MDGQTVALLGGTGFIGSRLVAALIDAGKHVRIGTRRREHARHLSMLPVDIVELETFDTRSLARFVAGAQAAVNLVGVLHG
GRGTPYGAGFERAHVALPAALARACVEAGVRRVLHMSALGADSHGPSMYQRSKGDGEAALHAIAATEPLAVTIFRPSVVF
GPGDAFLNTFARLQRIAPVLPLAMPDARFQPVFVGDVVRAFVNTLELSAAHGRTYELGGPTVYTLEQLVRYCGTLVGRQA
RIVRLPDALARLQARVFECLPGEPVITRDNLASMSVPNVLSGPLAPELGIVPASLESIAPAYLGDAAQRSRFEAFRSRR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=306, Percent_Identity=33.0065359477124, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17556106, Length=289, Percent_Identity=27.681660899654, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24667554, Length=336, Percent_Identity=25.8928571428571, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33967; Mature: 33967

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGQTVALLGGTGFIGSRLVAALIDAGKHVRIGTRRREHARHLSMLPVDIVELETFDTRS
CCCCEEEEEECCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCEEEEEECCCCHHH
LARFVAGAQAAVNLVGVLHGGRGTPYGAGFERAHVALPAALARACVEAGVRRVLHMSALG
HHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ADSHGPSMYQRSKGDGEAALHAIAATEPLAVTIFRPSVVFGPGDAFLNTFARLQRIAPVL
CCCCCCHHHHCCCCCCHHHHHHHHCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHHHC
PLAMPDARFQPVFVGDVVRAFVNTLELSAAHGRTYELGGPTVYTLEQLVRYCGTLVGRQA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCCC
RIVRLPDALARLQARVFECLPGEPVITRDNLASMSVPNVLSGPLAPELGIVPASLESIAP
EEEECHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHCH
AYLGDAAQRSRFEAFRSRR
HHHCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDGQTVALLGGTGFIGSRLVAALIDAGKHVRIGTRRREHARHLSMLPVDIVELETFDTRS
CCCCEEEEEECCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCEEEEEECCCCHHH
LARFVAGAQAAVNLVGVLHGGRGTPYGAGFERAHVALPAALARACVEAGVRRVLHMSALG
HHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ADSHGPSMYQRSKGDGEAALHAIAATEPLAVTIFRPSVVFGPGDAFLNTFARLQRIAPVL
CCCCCCHHHHCCCCCCHHHHHHHHCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHHHC
PLAMPDARFQPVFVGDVVRAFVNTLELSAAHGRTYELGGPTVYTLEQLVRYCGTLVGRQA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCCC
RIVRLPDALARLQARVFECLPGEPVITRDNLASMSVPNVLSGPLAPELGIVPASLESIAP
EEEECHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHCH
AYLGDAAQRSRFEAFRSRR
HHHCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA