| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is purR [H]
Identifier: 161526136
GI number: 161526136
Start: 3249589
End: 3250608
Strand: Direct
Name: purR [H]
Synonym: Bmul_2967
Alternate gene names: 161526136
Gene position: 3249589-3250608 (Clockwise)
Preceding gene: 161526135
Following gene: 161526137
Centisome position: 94.23
GC content: 71.47
Gene sequence:
>1020_bases ATGGGCACCACCATTCGCGACGTGGCGCGGGCGGCAGAGGTCTCGATCGGCACCGTGTCGCGCGCGCTGAAAAATCAGCC GGGCCTGTCCGAAACGACGCGCGCGCGGATCGTCGAGATTGCGCAGCGGCTCGGCTACGACCACGCGCAGCTGCGGCCGC GCATCCGCCGGCTCACGTTCCTGCTGCATCGGCAGCACAACCGCTTTCCGGCGAGCCCGTTCTTCTCGCACGTGCTGCAC GGCGTCGAGGACGCCTGCCGCGAACGCGGCATCGTGCCGACGCTGCTGACGGTCGGCCCGAACGACGACGTGCTGCGCCA GATGCGTCCGCACGCGCCCGACGCGATCGCGGTGGCCGGCTTCATCGAACCGGAAACGATCGAGGCGCTCGCCGCGACCG GCCGCCCGCTCGTGCTGATCGACCTGTGGGCGCCTGGCCTGCGCTCGGTCAACATCGACAACGCGACCGGCGCCGCACTC GCGATGCGCCATCTGCTGGCAACGGGCCGTTCGCGGATCGCCTTCATCGGCGGCTCGCCCGCGCACTACAGCATCGCGCA GCGCGCGATCGGCTATCGCCGCGCATTCTTCGAGGCCGGCCGGCTGTTCGATCCCGCGTACGAAGTGACGATCGACGCAG GGCTCGATCCCGACACCGGCGCCACGCGCGCGATGCAGCAGCTGCTCGACGCGCCGGGCCCGCGGCCCGACGCGGTGTTC GCGTACAACGACGCGGCCGCGCTGGCCGCGCAGCGCGTATGCCTCGCTCGCGGCCTGCGGATTCCGGACGACATCGCGAT CGTCGGCTTCGACGACATTCCCGCCGCCGCGCACGCGAACCCGCCGCTGACGACGCTCGCGGTCGACAAGGAAGCGCTCG GCCGCCGCGGCGTCGAACTGCTGCTCGCCGAGTCGCCCGAACACACCGAGATCTCGCTGCCCGTCGAGCTGATCGTGCGG GCCAGCAGCCAGTCCGCCGGCTCGCCGGCCCTCGATACCGCCACGGTCACCGAATCATGA
Upstream 100 bases:
>100_bases AAGCGGCTATTTGCGGGTATTCCCCGGTTATCCGACCCGTTTTCCCGAACAAGTTTTACTATACAATCGCCGTCAACCTA AACATTCCGGAACCCGAACG
Downstream 100 bases:
>100_bases ACATGCCTCCGGTCCAGTCCTGCCCCGCCACGCCGGCCGCCCATGCGCAGCCGGCGCCGTTCGTCGCGAACTTCCGCGAT CCGTCGTTCCTGCTGTCGCA
Product: LacI family transcription regulator
Products: NA
Alternate protein names: Pur regulon repressor; Purine nucleotide synthesis repressor [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MGTTIRDVARAAEVSIGTVSRALKNQPGLSETTRARIVEIAQRLGYDHAQLRPRIRRLTFLLHRQHNRFPASPFFSHVLH GVEDACRERGIVPTLLTVGPNDDVLRQMRPHAPDAIAVAGFIEPETIEALAATGRPLVLIDLWAPGLRSVNIDNATGAAL AMRHLLATGRSRIAFIGGSPAHYSIAQRAIGYRRAFFEAGRLFDPAYEVTIDAGLDPDTGATRAMQQLLDAPGPRPDAVF AYNDAAALAAQRVCLARGLRIPDDIAIVGFDDIPAAAHANPPLTTLAVDKEALGRRGVELLLAESPEHTEISLPVELIVR ASSQSAGSPALDTATVTES
Sequences:
>Translated_339_residues MGTTIRDVARAAEVSIGTVSRALKNQPGLSETTRARIVEIAQRLGYDHAQLRPRIRRLTFLLHRQHNRFPASPFFSHVLH GVEDACRERGIVPTLLTVGPNDDVLRQMRPHAPDAIAVAGFIEPETIEALAATGRPLVLIDLWAPGLRSVNIDNATGAAL AMRHLLATGRSRIAFIGGSPAHYSIAQRAIGYRRAFFEAGRLFDPAYEVTIDAGLDPDTGATRAMQQLLDAPGPRPDAVF AYNDAAALAAQRVCLARGLRIPDDIAIVGFDDIPAAAHANPPLTTLAVDKEALGRRGVELLLAESPEHTEISLPVELIVR ASSQSAGSPALDTATVTES >Mature_338_residues GTTIRDVARAAEVSIGTVSRALKNQPGLSETTRARIVEIAQRLGYDHAQLRPRIRRLTFLLHRQHNRFPASPFFSHVLHG VEDACRERGIVPTLLTVGPNDDVLRQMRPHAPDAIAVAGFIEPETIEALAATGRPLVLIDLWAPGLRSVNIDNATGAALA MRHLLATGRSRIAFIGGSPAHYSIAQRAIGYRRAFFEAGRLFDPAYEVTIDAGLDPDTGATRAMQQLLDAPGPRPDAVFA YNDAAALAAQRVCLARGLRIPDDIAIVGFDDIPAAAHANPPLTTLAVDKEALGRRGVELLLAESPEHTEISLPVELIVRA SSQSAGSPALDTATVTES
Specific function: Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepre
COG id: COG1609
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1790369, Length=352, Percent_Identity=31.5340909090909, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI1790194, Length=313, Percent_Identity=32.2683706070287, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1789456, Length=320, Percent_Identity=30, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1787948, Length=328, Percent_Identity=28.6585365853659, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1789202, Length=294, Percent_Identity=29.9319727891156, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1788474, Length=328, Percent_Identity=29.5731707317073, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI48994940, Length=314, Percent_Identity=28.343949044586, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1787580, Length=315, Percent_Identity=26.031746031746, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1789068, Length=303, Percent_Identity=25.7425742574257, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1786540, Length=352, Percent_Identity=26.9886363636364, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1787906, Length=354, Percent_Identity=25.7062146892655, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 36360; Mature: 36229
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTTIRDVARAAEVSIGTVSRALKNQPGLSETTRARIVEIAQRLGYDHAQLRPRIRRLTF CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LLHRQHNRFPASPFFSHVLHGVEDACRERGIVPTLLTVGPNDDVLRQMRPHAPDAIAVAG HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCCCEEEEE FIEPETIEALAATGRPLVLIDLWAPGLRSVNIDNATGAALAMRHLLATGRSRIAFIGGSP CCCHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCHHHHHHHHHHHCCCCEEEEECCCC AHYSIAQRAIGYRRAFFEAGRLFDPAYEVTIDAGLDPDTGATRAMQQLLDAPGPRPDAVF CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEE AYNDAAALAAQRVCLARGLRIPDDIAIVGFDDIPAAAHANPPLTTLAVDKEALGRRGVEL EECCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECHHHHCCCCEEE LLAESPEHTEISLPVELIVRASSQSAGSPALDTATVTES EEECCCCCCEEECCHHHEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure GTTIRDVARAAEVSIGTVSRALKNQPGLSETTRARIVEIAQRLGYDHAQLRPRIRRLTF CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LLHRQHNRFPASPFFSHVLHGVEDACRERGIVPTLLTVGPNDDVLRQMRPHAPDAIAVAG HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCCCEEEEE FIEPETIEALAATGRPLVLIDLWAPGLRSVNIDNATGAALAMRHLLATGRSRIAFIGGSP CCCHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCHHHHHHHHHHHCCCCEEEEECCCC AHYSIAQRAIGYRRAFFEAGRLFDPAYEVTIDAGLDPDTGATRAMQQLLDAPGPRPDAVF CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEE AYNDAAALAAQRVCLARGLRIPDDIAIVGFDDIPAAAHANPPLTTLAVDKEALGRRGVEL EECCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECHHHHCCCCEEE LLAESPEHTEISLPVELIVRASSQSAGSPALDTATVTES EEECCCCCCEEECCHHHEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA