| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is engD [H]
Identifier: 161526040
GI number: 161526040
Start: 3135134
End: 3136228
Strand: Direct
Name: engD [H]
Synonym: Bmul_2871
Alternate gene names: 161526040
Gene position: 3135134-3136228 (Clockwise)
Preceding gene: 161526034
Following gene: 161526043
Centisome position: 90.91
GC content: 64.57
Gene sequence:
>1095_bases ATGAGCCTCAAATGCGGCATCGTCGGCTTGCCCAACGTCGGCAAGTCCACTCTGTTCAATGCGCTGACCAAGGCCGGCAT CGCCGCCGAGAACTACCCGTTCTGCACGATCGAGCCGAACGTCGGCATCGTCGAAGTGCCCGATGCGCGCCTGAAGGCGC TCGCCGAAATCGTGAAGCCCGAGCGCATCGTGCCGGCCGTCGTCGAGTTCGTCGACATCGCGGGCCTCGTCGCCGGCGCG AGCAAGGGCGAAGGCCTCGGCAACCAGTTCCTCGCGAACATTCGCGAAACCGATGCGATCACGCACGTCGTGCGCTGCTT CGAGGACGACAACGTCGTCCACGTCGCAGGCAAGGTGAGCCCGATCGACGACATCGAGGTGATCAACACCGAACTCGCGC TCGCCGATCTCGGCACGGTCGAGAAGGCGCTCGCGCGCTATTCGAAGGCCGCGAAGTCCGGCAACGACAAGGAAGCGGCG AAGCTCGTCGCGGTGCTCGACAAGGTGCGCGCGCATCTGGACCAGGGCAAGGCCGTGCGCGGCCTCGCGCTGTCCGACGA CGAGCAGGCGCTGCTCAAGCCGTTCTGTCTGATCACGGCGAAGCCGGCGATGTACGTCGCGAACGTGAAGGACGACGGTT TCGAGAACAACCCGCACCTCGACGCGGTGCGCAAGTACGCGGAAAGCGAGAATTCGCCCGTGGTCGCGGTGTGCGCGGCG ATCGAAGCGGAAATCGCCGATCTCGACGATGCCGACAAGGAAGCGTTCCTCGCCGACATGGGCATGTCGGAGCCGGGTCT CGATCGCGTGATCCGCGCCGGCTTCAAGCTGCTCGGGCTGCAGACGTACTTCACCGCGGGCGTGAAGGAAGTGCGCGCGT GGACGATCCACATCGGCGACACCGCGCCGCAGGCGGCCGGCGTGATCCACACCGACTTCGAGCGCGGCTTCATTCGCGCG CAGACGATCGCGTTCGACGATTTCATCGCATATAAGGGCGAGCAAGGCGCGAAGGAAGCCGGCAAGATGCGCGCGGAAGG GAAGGAATATGTCGTGCACGACGGCGATGTGATGAACTTCCTGTTCAACGTCTGA
Upstream 100 bases:
>100_bases TGAACGCCGGCCCGTCGCGCTGCCCAGCGCCGGCCGCCCTCTTTGTCCTGCGCCGCCGCGCCCTGCCCGGCCGCGCCGCT TCATCCGTTCGAAGGATTCC
Downstream 100 bases:
>100_bases GCGTCGTTTCGATGCTGCCGTGAGAAAGCCCGCTCGATGCGGGCTTTTTCTTTATGAGCGTGGACGCTGTCACCTTGGAA GCGTGCGCAGGCTCTCCGGC
Product: GTP-dependent nucleic acid-binding protein EngD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKPERIVPAVVEFVDIAGLVAGA SKGEGLGNQFLANIRETDAITHVVRCFEDDNVVHVAGKVSPIDDIEVINTELALADLGTVEKALARYSKAAKSGNDKEAA KLVAVLDKVRAHLDQGKAVRGLALSDDEQALLKPFCLITAKPAMYVANVKDDGFENNPHLDAVRKYAESENSPVVAVCAA IEAEIADLDDADKEAFLADMGMSEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGDTAPQAAGVIHTDFERGFIRA QTIAFDDFIAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNFLFNV
Sequences:
>Translated_364_residues MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKPERIVPAVVEFVDIAGLVAGA SKGEGLGNQFLANIRETDAITHVVRCFEDDNVVHVAGKVSPIDDIEVINTELALADLGTVEKALARYSKAAKSGNDKEAA KLVAVLDKVRAHLDQGKAVRGLALSDDEQALLKPFCLITAKPAMYVANVKDDGFENNPHLDAVRKYAESENSPVVAVCAA IEAEIADLDDADKEAFLADMGMSEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGDTAPQAAGVIHTDFERGFIRA QTIAFDDFIAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNFLFNV >Mature_363_residues SLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKPERIVPAVVEFVDIAGLVAGAS KGEGLGNQFLANIRETDAITHVVRCFEDDNVVHVAGKVSPIDDIEVINTELALADLGTVEKALARYSKAAKSGNDKEAAK LVAVLDKVRAHLDQGKAVRGLALSDDEQALLKPFCLITAKPAMYVANVKDDGFENNPHLDAVRKYAESENSPVVAVCAAI EAEIADLDDADKEAFLADMGMSEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGDTAPQAAGVIHTDFERGFIRAQ TIAFDDFIAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNFLFNV
Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]
COG id: COG0012
COG function: function code J; Predicted GTPase, probable translation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI58761500, Length=369, Percent_Identity=42.8184281842818, Blast_Score=300, Evalue=2e-81, Organism=Homo sapiens, GI58761502, Length=225, Percent_Identity=35.5555555555556, Blast_Score=145, Evalue=8e-35, Organism=Escherichia coli, GI1787454, Length=364, Percent_Identity=70.0549450549451, Blast_Score=530, Evalue=1e-152, Organism=Escherichia coli, GI1789574, Length=141, Percent_Identity=28.3687943262411, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17509631, Length=366, Percent_Identity=40.9836065573771, Blast_Score=290, Evalue=6e-79, Organism=Saccharomyces cerevisiae, GI6319499, Length=369, Percent_Identity=39.2953929539295, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6321773, Length=379, Percent_Identity=35.3562005277045, Blast_Score=204, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6321649, Length=166, Percent_Identity=38.5542168674699, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI24640873, Length=368, Percent_Identity=42.1195652173913, Blast_Score=291, Evalue=4e-79, Organism=Drosophila melanogaster, GI24640877, Length=368, Percent_Identity=42.1195652173913, Blast_Score=291, Evalue=4e-79, Organism=Drosophila melanogaster, GI24640875, Length=368, Percent_Identity=42.1195652173913, Blast_Score=291, Evalue=4e-79, Organism=Drosophila melanogaster, GI24640879, Length=326, Percent_Identity=39.5705521472393, Blast_Score=233, Evalue=1e-61, Organism=Drosophila melanogaster, GI24585318, Length=178, Percent_Identity=28.0898876404494, Blast_Score=68, Evalue=9e-12,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR004396 - InterPro: IPR013029 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR012676 - InterPro: IPR023192 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]
EC number: NA
Molecular weight: Translated: 39011; Mature: 38880
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKP CCCEECEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCHHHHHHHHHHCC ERIVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVVHVAGKVS CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC PIDDIEVINTELALADLGTVEKALARYSKAAKSGNDKEAAKLVAVLDKVRAHLDQGKAVR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEE GLALSDDEQALLKPFCLITAKPAMYVANVKDDGFENNPHLDAVRKYAESENSPVVAVCAA CEEECCCHHHHHCCHHEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEH IEAEIADLDDADKEAFLADMGMSEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD HHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECC TAPQAAGVIHTDFERGFIRAQTIAFDDFIAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF CCCCCCCCEEECCCCCEEEEEEEEHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCHHHHH LFNV HHCC >Mature Secondary Structure SLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDARLKALAEIVKP CCEECEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCHHHHHHHHHHCC ERIVPAVVEFVDIAGLVAGASKGEGLGNQFLANIRETDAITHVVRCFEDDNVVHVAGKVS CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC PIDDIEVINTELALADLGTVEKALARYSKAAKSGNDKEAAKLVAVLDKVRAHLDQGKAVR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEE GLALSDDEQALLKPFCLITAKPAMYVANVKDDGFENNPHLDAVRKYAESENSPVVAVCAA CEEECCCHHHHHCCHHEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEH IEAEIADLDDADKEAFLADMGMSEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHIGD HHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECC TAPQAAGVIHTDFERGFIRAQTIAFDDFIAYKGEQGAKEAGKMRAEGKEYVVHDGDVMNF CCCCCCCCEEECCCCCEEEEEEEEHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCHHHHH LFNV HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]