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The map label for this gene is dedA [H]

Identifier: 161525789

GI number: 161525789

Start: 2854987

End: 2855670

Strand: Reverse

Name: dedA [H]

Synonym: Bmul_2620

Alternate gene names: 161525789

Gene position: 2855670-2854987 (Counterclockwise)

Preceding gene: 161525792

Following gene: 161525787

Centisome position: 82.81

GC content: 62.57

Gene sequence:

>684_bases
TTGGATACGCTGCTTCATTTCGTCAACCTTGTCCTGCATATCGACGCATTCCTCGGCGATTTCATCCGGCAGTACGGCGC
GTGGGTGTACCTGGTGCTGTTCCTGATCGTGTTCTGCGAGACCGGGCTGGTCGTATTTCCGTTTCTGCCCGGCGATTCGC
TGCTGTTCATCGGCGGCGCGTTCGCCGCGACCGGCGAAATGAATGTCGGTGCGCTGATCGTGCTGCTGCTCGTCGCGGCG
ATCGGCGGCAATACCGTCAACTATCTGATCGGTCGCTGGGTCGGGCCGAAGGTGTTCAATACGCGCATCCCGGTGCTCGA
ACGCTTCCTCGATCGCGCGGCGCTGCAGAAGACGCACACGTTCTATGAAAAGCACGGCGGCAAGACCATCGTGCTCGCGC
GCTTCATTCCGGTCGTGCGCACGTTCGCGCCGTTCGTCGCGGGTGCGTCGGCGATGAGCGCGACGCGCTTTCAGTTGTTC
AACGTGCTCGGCGCGCTGATCTGGGTGCTGCTGCTCGTGCTGCTCGGTTACTTCTTCGGCAACATTCCGTTCATCCGCCA
GTATCTGAACGTGATCGTGCTGGCTGGGATCGGCGCGGCGGTGGTGCCGGTCGCGCTCGGCGCGCTCTGGAAGCTTCTGC
GCGGGCGGCATTCCGATACGACGCAAAAAACCGGCGGGCGGTGA

Upstream 100 bases:

>100_bases
GCAGTTTGGGTATCATGGCTGCGTCGCGCGCGCCGGCCTTGCCGGACGCCGTTTTCACCCCGGTGGCCGGTCTGGCCCTT
TCGCCTTCGAGGAATCGCAT

Downstream 100 bases:

>100_bases
GGTCGCCGCCGGCTGCGGAAGTGTGGTGAACGAGCGTGGCGATGTGCCACGCATCGACGAGCGACGAACCCCTCGCGTGG
TACTGCGAGGGGTTTTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MDTLLHFVNLVLHIDAFLGDFIRQYGAWVYLVLFLIVFCETGLVVFPFLPGDSLLFIGGAFAATGEMNVGALIVLLLVAA
IGGNTVNYLIGRWVGPKVFNTRIPVLERFLDRAALQKTHTFYEKHGGKTIVLARFIPVVRTFAPFVAGASAMSATRFQLF
NVLGALIWVLLLVLLGYFFGNIPFIRQYLNVIVLAGIGAAVVPVALGALWKLLRGRHSDTTQKTGGR

Sequences:

>Translated_227_residues
MDTLLHFVNLVLHIDAFLGDFIRQYGAWVYLVLFLIVFCETGLVVFPFLPGDSLLFIGGAFAATGEMNVGALIVLLLVAA
IGGNTVNYLIGRWVGPKVFNTRIPVLERFLDRAALQKTHTFYEKHGGKTIVLARFIPVVRTFAPFVAGASAMSATRFQLF
NVLGALIWVLLLVLLGYFFGNIPFIRQYLNVIVLAGIGAAVVPVALGALWKLLRGRHSDTTQKTGGR
>Mature_227_residues
MDTLLHFVNLVLHIDAFLGDFIRQYGAWVYLVLFLIVFCETGLVVFPFLPGDSLLFIGGAFAATGEMNVGALIVLLLVAA
IGGNTVNYLIGRWVGPKVFNTRIPVLERFLDRAALQKTHTFYEKHGGKTIVLARFIPVVRTFAPFVAGASAMSATRFQLF
NVLGALIWVLLLVLLGYFFGNIPFIRQYLNVIVLAGIGAAVVPVALGALWKLLRGRHSDTTQKTGGR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=205, Percent_Identity=53.1707317073171, Blast_Score=221, Evalue=4e-59,
Organism=Escherichia coli, GI1789481, Length=168, Percent_Identity=41.0714285714286, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1789384, Length=166, Percent_Identity=36.144578313253, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24880; Mature: 24880

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLLHFVNLVLHIDAFLGDFIRQYGAWVYLVLFLIVFCETGLVVFPFLPGDSLLFIGGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCH
FAATGEMNVGALIVLLLVAAIGGNTVNYLIGRWVGPKVFNTRIPVLERFLDRAALQKTHT
HHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHH
FYEKHGGKTIVLARFIPVVRTFAPFVAGASAMSATRFQLFNVLGALIWVLLLVLLGYFFG
HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NIPFIRQYLNVIVLAGIGAAVVPVALGALWKLLRGRHSDTTQKTGGR
CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDTLLHFVNLVLHIDAFLGDFIRQYGAWVYLVLFLIVFCETGLVVFPFLPGDSLLFIGGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCH
FAATGEMNVGALIVLLLVAAIGGNTVNYLIGRWVGPKVFNTRIPVLERFLDRAALQKTHT
HHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHH
FYEKHGGKTIVLARFIPVVRTFAPFVAGASAMSATRFQLFNVLGALIWVLLLVLLGYFFG
HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NIPFIRQYLNVIVLAGIGAAVVPVALGALWKLLRGRHSDTTQKTGGR
CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]