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The map label for this gene is ucpA [C]

Identifier: 161525787

GI number: 161525787

Start: 2852910

End: 2853692

Strand: Reverse

Name: ucpA [C]

Synonym: Bmul_2618

Alternate gene names: 161525787

Gene position: 2853692-2852910 (Counterclockwise)

Preceding gene: 161525789

Following gene: 161525785

Centisome position: 82.75

GC content: 64.75

Gene sequence:

>783_bases
ATGTCCACACAAAAAAACGGGGTTCCGCGCTGCGTGTTGATTACCGGCGCCACGGGAGGCATCGGTTCCGCCCTCGCGCA
GGAATACGCGCAGGCTGGCACGGCCGTGCTGATCCTGCACGGCCGAAACAGTGCGTTGCTGCAGAAACTGAGCGACGCCT
GCACCGCGCTGGGCGCGCGGGTCGTCACCGCGACCTTCGACGTTAGGGACCACGACACGCTGCGCAACTGGGTCAGCGAG
ATGAGCGCAACCGAAGCGCCCGATCTCGTGATTGCCAATGCGGGCGTCAATATCAATACCGGTCCGCAGCATCAAGGCGA
AGACTGGGAAGACATGCACCGTCTATTGGACGTGAACGTGAAGGCCAGTCTCGCCACCGCGCATGCGGCGATGCCGGCGA
TGCGCGCGCGCCGCAGCGGCCAGATCGCATTGATCAGCTCGCTGGCGGCGTGGCGCGGGCTGCCCGAGACCCCGAGCTAC
AGCGCGAGCAAGGCCGCGGTGAAGGCATACGGCGAAGCGATGCGCGACGGGCTGGCAGCGGAGGGCGTGAAGGTCAACGT
CGTAATGCCCGGCTACGTCGAATCGCAGATGTGCTTCGACATGCCGGGCCCGAAGCCCTTTCTGTGGAAAGCGCCGAAAG
CGGCGCGCGTGATCCGTCTCGGTCTGCGCGCCAATCGTGCGCGCATCAGCTTTCCATTCCCGCTGAATCTCGGGTGCTTC
TTGTTGGCGGGAATACATCCGGCCGTGTCCGGATGGCTCCTGAGCCGGCTGGGTTACGAGTAA

Upstream 100 bases:

>100_bases
TAGTTGGGAGAATTATTCTATGAATTGTGCGCGTTTTCGGCGGCGGATGTCCGATAATGCAGCCCGAAAGCGTCATTGAC
CGAAGCGATACTTCTTTACC

Downstream 100 bases:

>100_bases
GCGAGATTTGCGCGGGCGCGTCGCGGACGACGTCGATCGTCGGCGACGGTTCGGCGGACGGGTGCAGCAGCAGCTCCTGC
GCGGCGACCCGCAGCGCGTG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSTQKNGVPRCVLITGATGGIGSALAQEYAQAGTAVLILHGRNSALLQKLSDACTALGARVVTATFDVRDHDTLRNWVSE
MSATEAPDLVIANAGVNINTGPQHQGEDWEDMHRLLDVNVKASLATAHAAMPAMRARRSGQIALISSLAAWRGLPETPSY
SASKAAVKAYGEAMRDGLAAEGVKVNVVMPGYVESQMCFDMPGPKPFLWKAPKAARVIRLGLRANRARISFPFPLNLGCF
LLAGIHPAVSGWLLSRLGYE

Sequences:

>Translated_260_residues
MSTQKNGVPRCVLITGATGGIGSALAQEYAQAGTAVLILHGRNSALLQKLSDACTALGARVVTATFDVRDHDTLRNWVSE
MSATEAPDLVIANAGVNINTGPQHQGEDWEDMHRLLDVNVKASLATAHAAMPAMRARRSGQIALISSLAAWRGLPETPSY
SASKAAVKAYGEAMRDGLAAEGVKVNVVMPGYVESQMCFDMPGPKPFLWKAPKAARVIRLGLRANRARISFPFPLNLGCF
LLAGIHPAVSGWLLSRLGYE
>Mature_259_residues
STQKNGVPRCVLITGATGGIGSALAQEYAQAGTAVLILHGRNSALLQKLSDACTALGARVVTATFDVRDHDTLRNWVSEM
SATEAPDLVIANAGVNINTGPQHQGEDWEDMHRLLDVNVKASLATAHAAMPAMRARRSGQIALISSLAAWRGLPETPSYS
ASKAAVKAYGEAMRDGLAAEGVKVNVVMPGYVESQMCFDMPGPKPFLWKAPKAARVIRLGLRANRARISFPFPLNLGCFL
LAGIHPAVSGWLLSRLGYE

Specific function: Unknown

COG id: COG4221

COG function: function code R; Short-chain alcohol dehydrogenase of unknown specificity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=193, Percent_Identity=30.5699481865285, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI157739938, Length=200, Percent_Identity=27.5, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI142976729, Length=189, Percent_Identity=31.2169312169312, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI226371731, Length=209, Percent_Identity=28.2296650717703, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI40807363, Length=200, Percent_Identity=32.5, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI109715829, Length=207, Percent_Identity=30.9178743961353, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI7657478, Length=192, Percent_Identity=28.125, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI32483357, Length=223, Percent_Identity=26.457399103139, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI210032110, Length=253, Percent_Identity=22.9249011857708, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI40254992, Length=190, Percent_Identity=29.4736842105263, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI87082100, Length=190, Percent_Identity=30, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787820, Length=186, Percent_Identity=32.258064516129, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1787335, Length=192, Percent_Identity=29.1666666666667, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1789208, Length=193, Percent_Identity=27.979274611399, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI2367175, Length=190, Percent_Identity=27.3684210526316, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87082160, Length=203, Percent_Identity=26.6009852216749, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1790717, Length=218, Percent_Identity=27.5229357798165, Blast_Score=65, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=196, Percent_Identity=30.1020408163265, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17567345, Length=204, Percent_Identity=26.9607843137255, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560676, Length=207, Percent_Identity=25.6038647342995, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17544670, Length=202, Percent_Identity=28.2178217821782, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17560332, Length=196, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17508895, Length=218, Percent_Identity=30.2752293577982, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI72000259, Length=191, Percent_Identity=29.3193717277487, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17563726, Length=203, Percent_Identity=27.5862068965517, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17551412, Length=196, Percent_Identity=26.530612244898, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17559104, Length=194, Percent_Identity=27.8350515463918, Blast_Score=64, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6323882, Length=196, Percent_Identity=30.6122448979592, Blast_Score=86, Evalue=4e-18,
Organism=Drosophila melanogaster, GI21358495, Length=202, Percent_Identity=29.2079207920792, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24644339, Length=205, Percent_Identity=31.219512195122, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21355319, Length=202, Percent_Identity=27.2277227722772, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571526, Length=199, Percent_Identity=29.1457286432161, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI281364892, Length=203, Percent_Identity=28.0788177339901, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI23397609, Length=188, Percent_Identity=29.7872340425532, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI21357041, Length=190, Percent_Identity=27.3684210526316, Blast_Score=68, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27689; Mature: 27558

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTQKNGVPRCVLITGATGGIGSALAQEYAQAGTAVLILHGRNSALLQKLSDACTALGAR
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCE
VVTATFDVRDHDTLRNWVSEMSATEAPDLVIANAGVNINTGPQHQGEDWEDMHRLLDVNV
EEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCC
KASLATAHAAMPAMRARRSGQIALISSLAAWRGLPETPSYSASKAAVKAYGEAMRDGLAA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHH
EGVKVNVVMPGYVESQMCFDMPGPKPFLWKAPKAARVIRLGLRANRARISFPFPLNLGCF
CCEEEEEEECCCCCCCCEECCCCCCCCEECCCCHHHHHHHCCCCCCEEEECCCCCCHHHH
LLAGIHPAVSGWLLSRLGYE
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STQKNGVPRCVLITGATGGIGSALAQEYAQAGTAVLILHGRNSALLQKLSDACTALGAR
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCE
VVTATFDVRDHDTLRNWVSEMSATEAPDLVIANAGVNINTGPQHQGEDWEDMHRLLDVNV
EEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCC
KASLATAHAAMPAMRARRSGQIALISSLAAWRGLPETPSYSASKAAVKAYGEAMRDGLAA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHH
EGVKVNVVMPGYVESQMCFDMPGPKPFLWKAPKAARVIRLGLRANRARISFPFPLNLGCF
CCEEEEEEECCCCCCCCEECCCCCCCCEECCCCHHHHHHHCCCCCCEEEECCCCCCHHHH
LLAGIHPAVSGWLLSRLGYE
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1730672 [H]