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The map label for this gene is pal [H]

Identifier: 161525757

GI number: 161525757

Start: 2811933

End: 2812463

Strand: Direct

Name: pal [H]

Synonym: Bmul_2588

Alternate gene names: 161525757

Gene position: 2811933-2812463 (Clockwise)

Preceding gene: 161525756

Following gene: 161525758

Centisome position: 81.54

GC content: 61.77

Gene sequence:

>531_bases
ATGACCACAAGGAGAGTAACCATGATGTCGAAAAAAGTTCGTCTGGCCCTGGCCGTGATGATGATCGGCGCGCTCGCAGC
GTGTAAGTCGGGTGTGAAGCTCGACGACAAGGCAAACGCCGGTGCGATGAGCACGCAACCGAGCGCCGACAACGTCGCGC
AAGTGAACGTCGATCCGCTGAACGATCCGAACAGCCCGCTCGCGAAGCGCAGCATCTACTTCGACTTCGACAGCTATTCG
GTGAAGGACGAGTATCAGCCGCTGCTGCAACAGCACGCTCAGTATCTGAAGAGCCACCCGCAGCGCCACGTGCTGATCCA
GGGCAATACCGACGAACGCGGCACGAGCGAGTACAACCTCGCGCTGGGCCAGAAGCGTGCGGAAGCCGTGCGCCGCGCGC
TCGCGCTGCTCGGCGTTGCCGATTCGCAGATGGAAGCCGTGAGCCTCGGCAAGGAAAAGCCGCAAGCAACGGGTCACGAC
GAAGCGTCGTGGGCGCAGAACCGCCGCGCCGATCTCGTCTACCAACAGTAA

Upstream 100 bases:

>100_bases
ACGTGCTCGCTGCGGTGCCTTCCGACGGCAGTGCGCCGCCGCAGATTCTGTCCGTCCAGGGCGGCTCGGTTCGTGAGCCG
TCGTGGGGGCCCTTCATGCA

Downstream 100 bases:

>100_bases
GTAACGGAAGAATCGCTGTATGACGCACCGTGTAACCTGGCTGCGCGCGGTCGCAGCGTTCTGCGTCGTCGGCGCGGCGT
GGTCGGCCGCGCCGGCGCAC

Product: peptidoglycan-associated lipoprotein

Products: NA

Alternate protein names: OMP P6; 15 kDa peptidoglycan-associated lipoprotein; PC protein [H]

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MTTRRVTMMSKKVRLALAVMMIGALAACKSGVKLDDKANAGAMSTQPSADNVAQVNVDPLNDPNSPLAKRSIYFDFDSYS
VKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRAEAVRRALALLGVADSQMEAVSLGKEKPQATGHD
EASWAQNRRADLVYQQ

Sequences:

>Translated_176_residues
MTTRRVTMMSKKVRLALAVMMIGALAACKSGVKLDDKANAGAMSTQPSADNVAQVNVDPLNDPNSPLAKRSIYFDFDSYS
VKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRAEAVRRALALLGVADSQMEAVSLGKEKPQATGHD
EASWAQNRRADLVYQQ
>Mature_175_residues
TTRRVTMMSKKVRLALAVMMIGALAACKSGVKLDDKANAGAMSTQPSADNVAQVNVDPLNDPNSPLAKRSIYFDFDSYSV
KDEYQPLLQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRAEAVRRALALLGVADSQMEAVSLGKEKPQATGHDE
ASWAQNRRADLVYQQ

Specific function: Thought to play a role in bacterial envelope integrity. Links the outer membrane to the peptidoglycan layer [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=169, Percent_Identity=37.8698224852071, Blast_Score=117, Evalue=3e-28,
Organism=Escherichia coli, GI48994946, Length=140, Percent_Identity=32.8571428571429, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 19387; Mature: 19256

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRRVTMMSKKVRLALAVMMIGALAACKSGVKLDDKANAGAMSTQPSADNVAQVNVDPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
NDPNSPLAKRSIYFDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDERGTSEYNL
CCCCCCCHHCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHH
ALGQKRAEAVRRALALLGVADSQMEAVSLGKEKPQATGHDEASWAQNRRADLVYQQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TTRRVTMMSKKVRLALAVMMIGALAACKSGVKLDDKANAGAMSTQPSADNVAQVNVDPL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
NDPNSPLAKRSIYFDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDERGTSEYNL
CCCCCCCHHCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHH
ALGQKRAEAVRRALALLGVADSQMEAVSLGKEKPQATGHDEASWAQNRRADLVYQQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2828309; 3257200; 7542800 [H]