Click here to switch to the map view.

The map label for this gene is abcA [H]

Identifier: 161525684

GI number: 161525684

Start: 2734736

End: 2736010

Strand: Reverse

Name: abcA [H]

Synonym: Bmul_2515

Alternate gene names: 161525684

Gene position: 2736010-2734736 (Counterclockwise)

Preceding gene: 161525685

Following gene: 161525683

Centisome position: 79.34

GC content: 54.75

Gene sequence:

>1275_bases
ATGTCCTCTAATGTGATTATTTCCGTTGCAGATCTCGGTAAGTGCTATCAGTTGTACGCGAAGCCGAGCGATCGCCTGAA
GCAGATGCTCTTTGGGCGCTTTAAGCGCTATTACACCGAGTTTTGGGCACTGAGAGACGTGTCATTTGACGTCCGCAGAG
GGGAAACAATTGGGATCATCGGGCGTAATGGTGCCGGCAAGTCAACCCTTTTGCAGATGTTGTCCGGAGTGTTGCAACAA
TCGGTCGGGCAAAGCGAGGTGCGCGGTCGCGTGTGCGCGCTGTTGGAGCTCGGTGCCGGTTTCAACCCTGAATTTACCGG
CCGCGAAAATGCGATTCTGACGGGCGCAATTTACGGTATTCCCGGCGAGCAAATGGAAGAAAAGCTTCGAGAAATCGAGG
CGTTCGCGGATATTGGGGATCATATCAATCAGCCGGTCAAGCATTATTCGAGTGGTATGTACGCGCGCCTTGCATTCTCG
GTCGCGATCCACGTCGATCCGGAGATACTTATTGTCGACGAGATACTGGCGGTAGGCGACGCTTTGTTTCAACGCAAGTG
CATGAACAAATTCTATGAATTTCGCGACCGTGGCTGCACGGTGCTTTTCGTGACTCACGATGCATATCAGATCAAGAGCA
CGTGTCAACGTGCGCTGTACCTGAAGAATGGTCGCCAAATCATGTTCGGTGATGCAGCGGAGGTCGTTGACCGCTATCTG
CAGGACCTGGAACTCGTTGAGAGCAAGCCAACTGATGTGGTACAAGGAGATACGACCGCTGGCGACGTGCCGCAATCCGC
TGCCGTAGCGCAGCCGGCGAGCCTGATCCGGATCACGGAGGTGGTCCTGACTGACGAATTCGGTTCACCCGTGACACAGG
TGCGAAGCGGGGAGACGGTTGATATTCGTTTCCGCTATCACGCAACGCGCAAGCAGTCCATTCCGATGGTGTCGTTTGTC
GTGAATCTCTATCGCCACGATTCGCTTTACATCTGCGGTACGACGACGCTCATGGATGGTCTGCAGCCGTTCGCGACAGA
GGATGAAGGTGAAGTGATCGTTCGCTTCCCCGACCTCCAGCTTCTTGCTGGACGCTACATGTGGCGCGTCGCAATCAACG
ACGAGAGAGGTCTTGGTATTCTGGCAGAAGCGACGCCCGTCTGCGAGTTTCAAGTGGTCGATGATTTTCAGGCGGTCGGT
CTCGTCAACGTGCCGCGACAGTGGATCGTGCACGGCCGGGTCGCGGAGAAACGAGAACTTATTCCAAGGATTTGA

Upstream 100 bases:

>100_bases
TATCCTGATCCATTGTCGTATTTTCAGCATCTTTTCCCGGGTATCTTGGTGGCGGTCTTTGGTATGTGGTGGTTTGAGCA
TACACGTGGAGGATTCGCAG

Downstream 100 bases:

>100_bases
TTTATGGAACGAATGCATTCCGATCATTTTCAGATGCAGCACCTCGTATACGAGCATACGCATCGCTATCAGCTTTTGTC
GCGTATTGCTTACGGACATG

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MSSNVIISVADLGKCYQLYAKPSDRLKQMLFGRFKRYYTEFWALRDVSFDVRRGETIGIIGRNGAGKSTLLQMLSGVLQQ
SVGQSEVRGRVCALLELGAGFNPEFTGRENAILTGAIYGIPGEQMEEKLREIEAFADIGDHINQPVKHYSSGMYARLAFS
VAIHVDPEILIVDEILAVGDALFQRKCMNKFYEFRDRGCTVLFVTHDAYQIKSTCQRALYLKNGRQIMFGDAAEVVDRYL
QDLELVESKPTDVVQGDTTAGDVPQSAAVAQPASLIRITEVVLTDEFGSPVTQVRSGETVDIRFRYHATRKQSIPMVSFV
VNLYRHDSLYICGTTTLMDGLQPFATEDEGEVIVRFPDLQLLAGRYMWRVAINDERGLGILAEATPVCEFQVVDDFQAVG
LVNVPRQWIVHGRVAEKRELIPRI

Sequences:

>Translated_424_residues
MSSNVIISVADLGKCYQLYAKPSDRLKQMLFGRFKRYYTEFWALRDVSFDVRRGETIGIIGRNGAGKSTLLQMLSGVLQQ
SVGQSEVRGRVCALLELGAGFNPEFTGRENAILTGAIYGIPGEQMEEKLREIEAFADIGDHINQPVKHYSSGMYARLAFS
VAIHVDPEILIVDEILAVGDALFQRKCMNKFYEFRDRGCTVLFVTHDAYQIKSTCQRALYLKNGRQIMFGDAAEVVDRYL
QDLELVESKPTDVVQGDTTAGDVPQSAAVAQPASLIRITEVVLTDEFGSPVTQVRSGETVDIRFRYHATRKQSIPMVSFV
VNLYRHDSLYICGTTTLMDGLQPFATEDEGEVIVRFPDLQLLAGRYMWRVAINDERGLGILAEATPVCEFQVVDDFQAVG
LVNVPRQWIVHGRVAEKRELIPRI
>Mature_423_residues
SSNVIISVADLGKCYQLYAKPSDRLKQMLFGRFKRYYTEFWALRDVSFDVRRGETIGIIGRNGAGKSTLLQMLSGVLQQS
VGQSEVRGRVCALLELGAGFNPEFTGRENAILTGAIYGIPGEQMEEKLREIEAFADIGDHINQPVKHYSSGMYARLAFSV
AIHVDPEILIVDEILAVGDALFQRKCMNKFYEFRDRGCTVLFVTHDAYQIKSTCQRALYLKNGRQIMFGDAAEVVDRYLQ
DLELVESKPTDVVQGDTTAGDVPQSAAVAQPASLIRITEVVLTDEFGSPVTQVRSGETVDIRFRYHATRKQSIPMVSFVV
NLYRHDSLYICGTTTLMDGLQPFATEDEGEVIVRFPDLQLLAGRYMWRVAINDERGLGILAEATPVCEFQVVDDFQAVGL
VNVPRQWIVHGRVAEKRELIPRI

Specific function: Influences the expression of the surface array protein gene (vapA). May have both regulatory and transport activities [H]

COG id: COG1134

COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI31657092, Length=221, Percent_Identity=24.4343891402715, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI27477115, Length=247, Percent_Identity=26.7206477732794, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI6005701, Length=246, Percent_Identity=26.8292682926829, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI27436953, Length=246, Percent_Identity=24.7967479674797, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI153792144, Length=253, Percent_Identity=25.296442687747, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI27262624, Length=246, Percent_Identity=24.390243902439, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI27262626, Length=246, Percent_Identity=24.390243902439, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI150417984, Length=274, Percent_Identity=24.4525547445255, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI116734710, Length=214, Percent_Identity=25.7009345794392, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI30795238, Length=209, Percent_Identity=22.9665071770335, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI27881501, Length=209, Percent_Identity=22.9665071770335, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI105990541, Length=225, Percent_Identity=26.2222222222222, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI48995001, Length=261, Percent_Identity=25.2873563218391, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1789891, Length=216, Percent_Identity=26.8518518518519, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1787758, Length=204, Percent_Identity=26.9607843137255, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI87082267, Length=206, Percent_Identity=26.2135922330097, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI48994943, Length=213, Percent_Identity=24.8826291079812, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081782, Length=187, Percent_Identity=30.4812834224599, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1789032, Length=220, Percent_Identity=22.7272727272727, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87081709, Length=202, Percent_Identity=23.7623762376238, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI87081791, Length=213, Percent_Identity=23.0046948356808, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787089, Length=216, Percent_Identity=23.6111111111111, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786319, Length=203, Percent_Identity=27.0935960591133, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI48994883, Length=237, Percent_Identity=25.7383966244726, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1786703, Length=204, Percent_Identity=27.9411764705882, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786398, Length=218, Percent_Identity=24.7706422018349, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790467, Length=220, Percent_Identity=23.1818181818182, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787105, Length=212, Percent_Identity=25.9433962264151, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789751, Length=235, Percent_Identity=26.3829787234043, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787029, Length=210, Percent_Identity=23.8095238095238, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI87082268, Length=219, Percent_Identity=25.5707762557078, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1788210, Length=215, Percent_Identity=28.3720930232558, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787712, Length=207, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI145693107, Length=219, Percent_Identity=23.2876712328767, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=215, Percent_Identity=27.906976744186, Blast_Score=89, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71983523, Length=236, Percent_Identity=26.6949152542373, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71983516, Length=236, Percent_Identity=26.6949152542373, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71983510, Length=236, Percent_Identity=26.6949152542373, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17510237, Length=218, Percent_Identity=22.9357798165138, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI115533608, Length=219, Percent_Identity=24.2009132420091, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24643674, Length=231, Percent_Identity=24.2424242424242, Blast_Score=85, Evalue=8e-17,
Organism=Drosophila melanogaster, GI116007184, Length=202, Percent_Identity=29.2079207920792, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI221500365, Length=202, Percent_Identity=29.2079207920792, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24666092, Length=245, Percent_Identity=23.6734693877551, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221512771, Length=220, Percent_Identity=22.7272727272727, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24648314, Length=198, Percent_Identity=25.7575757575758, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI28573571, Length=222, Percent_Identity=22.0720720720721, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI28573573, Length=222, Percent_Identity=22.0720720720721, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24650853, Length=176, Percent_Identity=27.8409090909091, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24650855, Length=176, Percent_Identity=27.8409090909091, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281362751, Length=176, Percent_Identity=27.8409090909091, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24582014, Length=178, Percent_Identity=29.7752808988764, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24582012, Length=178, Percent_Identity=29.7752808988764, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 47493; Mature: 47362

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNVIISVADLGKCYQLYAKPSDRLKQMLFGRFKRYYTEFWALRDVSFDVRRGETIGII
CCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEE
GRNGAGKSTLLQMLSGVLQQSVGQSEVRGRVCALLELGAGFNPEFTGRENAILTGAIYGI
ECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECC
PGEQMEEKLREIEAFADIGDHINQPVKHYSSGMYARLAFSVAIHVDPEILIVDEILAVGD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEHHHHHHHHH
ALFQRKCMNKFYEFRDRGCTVLFVTHDAYQIKSTCQRALYLKNGRQIMFGDAAEVVDRYL
HHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHH
QDLELVESKPTDVVQGDTTAGDVPQSAAVAQPASLIRITEVVLTDEFGSPVTQVRSGETV
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHEEECCCCCCHHHHCCCCEE
DIRFRYHATRKQSIPMVSFVVNLYRHDSLYICGTTTLMDGLQPFATEDEGEVIVRFPDLQ
EEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCCCCEEEECCCHH
LLAGRYMWRVAINDERGLGILAEATPVCEFQVVDDFQAVGLVNVPRQWIVHGRVAEKREL
HCCCCEEEEEEECCCCCCEEEECCCCCEEEEEECCHHHCCEECCCHHHHCCCCHHHHHHH
IPRI
CCCC
>Mature Secondary Structure 
SSNVIISVADLGKCYQLYAKPSDRLKQMLFGRFKRYYTEFWALRDVSFDVRRGETIGII
CCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEE
GRNGAGKSTLLQMLSGVLQQSVGQSEVRGRVCALLELGAGFNPEFTGRENAILTGAIYGI
ECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECC
PGEQMEEKLREIEAFADIGDHINQPVKHYSSGMYARLAFSVAIHVDPEILIVDEILAVGD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEHHHHHHHHH
ALFQRKCMNKFYEFRDRGCTVLFVTHDAYQIKSTCQRALYLKNGRQIMFGDAAEVVDRYL
HHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHH
QDLELVESKPTDVVQGDTTAGDVPQSAAVAQPASLIRITEVVLTDEFGSPVTQVRSGETV
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHEEECCCCCCHHHHCCCCEE
DIRFRYHATRKQSIPMVSFVVNLYRHDSLYICGTTTLMDGLQPFATEDEGEVIVRFPDLQ
EEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCCCCEEEECCCHH
LLAGRYMWRVAINDERGLGILAEATPVCEFQVVDDFQAVGLVNVPRQWIVHGRVAEKREL
HCCCCEEEEEEECCCCCCEEEECCCCCEEEEEECCHHHCCEECCCHHHHCCCCHHHHHHH
IPRI
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8491726 [H]