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The map label for this gene is rfaC [H]

Identifier: 161525665

GI number: 161525665

Start: 2710307

End: 2711380

Strand: Reverse

Name: rfaC [H]

Synonym: Bmul_2496

Alternate gene names: 161525665

Gene position: 2711380-2710307 (Counterclockwise)

Preceding gene: 161525666

Following gene: 161525664

Centisome position: 78.63

GC content: 69.27

Gene sequence:

>1074_bases
TTGTCAATCTGCGGCGCCGGGCGCGATAAAATCGCGTCTTTATGCCTGTCGCCGGCCGTCTGCCGGCGTTTTTTCAGCGT
GCAAAAGATCCTGATCGTGCGCGTGTCGTCGCTGGGCGACGTCGTGCACAACATGCCGGTGATCGCCGATATCCGGCGTC
GCCATCCCGATGCGCAGATCGACTGGCTCGTCGAAGAAAGCTTCGTCGATCTCGTGAAGCTCGTCGACGGCGTGCGCAAC
GTGCTGCCGTTCTCGCTGCGCCGCTGGCGCAAGCAGCCGTTCTCCGGCGCGACGTGGCGCGAGATCCGCGCGTTTCGCAA
GCAGCTCGCCGCCGAGCACTACGATCTCGTGATCGACTGCCAGGGCTTGATCAAGACCGCGTGGGTCGCGAGCTGGGCGC
GCGGGCCGCTCGTCGGCCTCGGCAATCGGACCGACGGCGCCGGCTACGAATGGCCGGTGCGCTTCTTCTATCGCAAGCGC
GTGCCGATCGCGCCGCGCACGCACGTCGTCGAGCGTTCGCGGCAGCTCGTCGCGGCCGCGCTCGGCGATCCGGCGCCGAC
GCCGGCCGATCCCGTCGATTTCGGCCTCGACACGCGCGACGCGTCGCGCGCGATCGCCTCGGTCGGGCTGAACCTGCCGG
TGCCCTACGTGGTGTTCGTCCACGCGACTTCGCGCGCCGATAAACAATGGCCCGACGCCGCCTGGATCGAGCTCGGCCAG
GCGCTCGTGCGGCGCGGCGCGTCGCTCGTGCTGCCGTGGGGCAACGACGCGGAGCGCGCGACGAGCGAGCGGCTCGCGAA
GGAATTCGGCGAGGCCGCGATCGTGCCGCCGAAGCTGTCGCTGCCGGCCGTGGTCGGCCTGATCGACGGCGCGGCCGCGA
CGGTCGGGGTTGATACAGGTCTGGTTCACATCGCGGCCGCGCTGAAGCGCCCGACCGTCGAACTGTACAATTTCGCGACG
GCCTGGCGAACCGGCGGCTACTGGTCGCCGAACGTCGTCAATCTCGGCACGGCGGGGCAGCCCCCGTCGATCGCGCAGGT
GAAGTCGGCGCTCGCGGGCTTCGGTCTCCTGTAA

Upstream 100 bases:

>100_bases
ACCTGGGCATCGGGCGGCCGCACGGGTCGCCCCAGCCGGTCGCGCTGGCCGGTCACCTTCTCCCCGAAAAGCGGCGTGCG
CGTGACGCGTGCGCCGCTTT

Downstream 100 bases:

>100_bases
CGCACGCATTCGTGGCGAACCGATCATGAGCGAATCCCAGATCATCGAAGTCTCGTCCGCCGACTGGAGCGGACATCAGC
TGTCGGTGCCGCGCGAGCAG

Product: lipopolysaccharide heptosyltransferase I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MSICGAGRDKIASLCLSPAVCRRFFSVQKILIVRVSSLGDVVHNMPVIADIRRRHPDAQIDWLVEESFVDLVKLVDGVRN
VLPFSLRRWRKQPFSGATWREIRAFRKQLAAEHYDLVIDCQGLIKTAWVASWARGPLVGLGNRTDGAGYEWPVRFFYRKR
VPIAPRTHVVERSRQLVAAALGDPAPTPADPVDFGLDTRDASRAIASVGLNLPVPYVVFVHATSRADKQWPDAAWIELGQ
ALVRRGASLVLPWGNDAERATSERLAKEFGEAAIVPPKLSLPAVVGLIDGAAATVGVDTGLVHIAAALKRPTVELYNFAT
AWRTGGYWSPNVVNLGTAGQPPSIAQVKSALAGFGLL

Sequences:

>Translated_357_residues
MSICGAGRDKIASLCLSPAVCRRFFSVQKILIVRVSSLGDVVHNMPVIADIRRRHPDAQIDWLVEESFVDLVKLVDGVRN
VLPFSLRRWRKQPFSGATWREIRAFRKQLAAEHYDLVIDCQGLIKTAWVASWARGPLVGLGNRTDGAGYEWPVRFFYRKR
VPIAPRTHVVERSRQLVAAALGDPAPTPADPVDFGLDTRDASRAIASVGLNLPVPYVVFVHATSRADKQWPDAAWIELGQ
ALVRRGASLVLPWGNDAERATSERLAKEFGEAAIVPPKLSLPAVVGLIDGAAATVGVDTGLVHIAAALKRPTVELYNFAT
AWRTGGYWSPNVVNLGTAGQPPSIAQVKSALAGFGLL
>Mature_356_residues
SICGAGRDKIASLCLSPAVCRRFFSVQKILIVRVSSLGDVVHNMPVIADIRRRHPDAQIDWLVEESFVDLVKLVDGVRNV
LPFSLRRWRKQPFSGATWREIRAFRKQLAAEHYDLVIDCQGLIKTAWVASWARGPLVGLGNRTDGAGYEWPVRFFYRKRV
PIAPRTHVVERSRQLVAAALGDPAPTPADPVDFGLDTRDASRAIASVGLNLPVPYVVFVHATSRADKQWPDAAWIELGQA
LVRRGASLVLPWGNDAERATSERLAKEFGEAAIVPPKLSLPAVVGLIDGAAATVGVDTGLVHIAAALKRPTVELYNFATA
WRTGGYWSPNVVNLGTAGQPPSIAQVKSALAGFGLL

Specific function: Heptose transfer to the lipopolysaccharide core. It transfers the innnermost heptose to [4'-P](3-deoxy-D-manno- octulosonic acid)2-IVA [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790051, Length=310, Percent_Identity=39.0322580645161, Blast_Score=192, Evalue=3e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011908 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38874; Mature: 38743

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSICGAGRDKIASLCLSPAVCRRFFSVQKILIVRVSSLGDVVHNMPVIADIRRRHPDAQI
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHH
DWLVEESFVDLVKLVDGVRNVLPFSLRRWRKQPFSGATWREIRAFRKQLAAEHYDLVIDC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEEC
QGLIKTAWVASWARGPLVGLGNRTDGAGYEWPVRFFYRKRVPIAPRTHVVERSRQLVAAA
HHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LGDPAPTPADPVDFGLDTRDASRAIASVGLNLPVPYVVFVHATSRADKQWPDAAWIELGQ
HCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHH
ALVRRGASLVLPWGNDAERATSERLAKEFGEAAIVPPKLSLPAVVGLIDGAAATVGVDTG
HHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHCCCHHHHCCHHH
LVHIAAALKRPTVELYNFATAWRTGGYWSPNVVNLGTAGQPPSIAQVKSALAGFGLL
HHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SICGAGRDKIASLCLSPAVCRRFFSVQKILIVRVSSLGDVVHNMPVIADIRRRHPDAQI
CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHH
DWLVEESFVDLVKLVDGVRNVLPFSLRRWRKQPFSGATWREIRAFRKQLAAEHYDLVIDC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEEC
QGLIKTAWVASWARGPLVGLGNRTDGAGYEWPVRFFYRKRVPIAPRTHVVERSRQLVAAA
HHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LGDPAPTPADPVDFGLDTRDASRAIASVGLNLPVPYVVFVHATSRADKQWPDAAWIELGQ
HCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHH
ALVRRGASLVLPWGNDAERATSERLAKEFGEAAIVPPKLSLPAVVGLIDGAAATVGVDTG
HHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHCCCHHHHCCHHH
LVHIAAALKRPTVELYNFATAWRTGGYWSPNVVNLGTAGQPPSIAQVKSALAGFGLL
HHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Glycosyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478319; 8041620; 9278503; 1624462 [H]