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The map label for this gene is yhdJ [C]

Identifier: 161525446

GI number: 161525446

Start: 2487717

End: 2488928

Strand: Direct

Name: yhdJ [C]

Synonym: Bmul_2276

Alternate gene names: 161525446

Gene position: 2487717-2488928 (Clockwise)

Preceding gene: 161525442

Following gene: 161525447

Centisome position: 72.14

GC content: 68.32

Gene sequence:

>1212_bases
GTGCCGGTGATCGAGCTCGCGCACCTGACGCCCGCACAGAAGCGTGCCTACGTGATCGCCGACAACCGGCTCGCACTCGA
TGCCGGCTGGGACGAGGCGATGCTCGCGCTGGAGTTCGCCGAACTGGCCGATGCGGGCTACGACCTGGATCTGACCGGCT
TCTCTGCCTCGGAGATTGAAGGACTGCTCGACCAGATCGAGGACACCGAGCCGACCGCCGATGAGGACGCGAGCGCGCAG
GAAGGCGACGCGGACGAGGACGACGTCGCGCCACCCACGGTTGCGGTCACGCGACCCGGTGATCTGTGGCTACTCGGCGA
GCATCGGTTGCTCTGTGCCGACAGCAGCGACGCTGCCGCTGTCGCGCTCCTCCTCGATGGCGAGCGCGCTCACTTGCTGT
TCACGAGCCCGCCCTACGCCAACCAACGCGAGTACACCACGGGTGGTGTTGCCGACTGGGACGTGCTGATGCAGGGCGTG
TTCGGCACTGCTCGCGCCGCGCTGCGCGACGAGGCGCAGGTCCTGGTGAACCTCGGCCTGGTCCACCGCGACAACGAGTG
GCAACCGTACTGGGACGGCTGGATCGAATGGATGCGCACCCAGGGTTGGCGGCGCTTCGGTTGGTACGTCTGGGACCAAT
CGGTGACCGTGCCCGGGGACTGGGCCGGTCGCCTCGCGCCACGCCACGAGTTCGTGTTCCACTTCAACCGCCAGGCGCGC
AAGCCGAACAAGATCGTGCCCTGCAAATGGGCCGGCCACGAAACGCACCTGCGTGCCGACGGTTCCTCCACCGCAATGCG
CGGCAAGGACGGCAAGGTCGGCGAATGGAACCACGCCGGCACGCCGACGCAGGAGTTCCGCATCCCGGACTCGGTCGTCG
AGGTGACGCGCCAACGCGGTCGCATCGGCGACGGCATTGATCATCCGGCCGTGTTCCCGCTGGGCCTGCCGAAGTTCTTC
ATCGAGGCCTATTCGGACGAAGCTGAGATCGTGTTCGAGCCGTTCTCCGGCAGCGGCACCACGCTGCTCGCCGGCCAGCT
CACCGGCCGCAAGGTGCGCGCCATCGAGCTCGCGCCGGAGTACGTCGACGTCGCGCTGCGCCGCTGGCTGCAGCACCACC
CGGGCACAGCGCCGGTGCTTGCCGTGACGGGCCAGACCTTCGCCGAGGTCGCCGCCGAGCGACTGGGCGCTACGGCAGAG
GTCACTGCATGA

Upstream 100 bases:

>100_bases
CGAGTTCGGCTGGACCAACCCGATCCTGGTCGACGGCGATCACGGCGTCATCGCTGGCCACGGCCGCCTGCTCGCAGCAC
GCAAGCTGGGGCTCACCGAA

Downstream 100 bases:

>100_bases
GCTGGCTGGCCGACCGCATCGAGCATTGGTCGCTCGACAAGCTGCTGCCCTACGTCCGGAACGCGCGCCTGCACTCGGAC
GAGCAAGTGGCGCAGATTGC

Product: DNA methylase N-4/N-6 domain-containing protein

Products: S-Adenosyl-L-Homocysteine; DNA 6-Methylaminopurine. [C]

Alternate protein names: DNA Methylase N-4/N-6 Domain Protein; DNA Methylase; DNA Methylase; Nuclease; ParB Domain Protein Nuclease; Methylase DpnIIB; Prophage; DNA Methylase Protein; ParB-Like Nuclease Domain Family; Phage Related DNA Methyltransferase; Adn Methyltransferase Protein; Adenine-Specific DNA-Methyltransferase; ParB Domain-Containing Protein Nuclease; Prophage LambdaW1 DNA Methylase; Phage Related DNA Methylase; Site-Specific DNA-Methyltransferase; Adenine Specific DNA Methyltransferase; Fragment Of Site-Specific DNA-Methyltransferase; Phage Methyltransferase; Methylase MjaVI

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MPVIELAHLTPAQKRAYVIADNRLALDAGWDEAMLALEFAELADAGYDLDLTGFSASEIEGLLDQIEDTEPTADEDASAQ
EGDADEDDVAPPTVAVTRPGDLWLLGEHRLLCADSSDAAAVALLLDGERAHLLFTSPPYANQREYTTGGVADWDVLMQGV
FGTARAALRDEAQVLVNLGLVHRDNEWQPYWDGWIEWMRTQGWRRFGWYVWDQSVTVPGDWAGRLAPRHEFVFHFNRQAR
KPNKIVPCKWAGHETHLRADGSSTAMRGKDGKVGEWNHAGTPTQEFRIPDSVVEVTRQRGRIGDGIDHPAVFPLGLPKFF
IEAYSDEAEIVFEPFSGSGTTLLAGQLTGRKVRAIELAPEYVDVALRRWLQHHPGTAPVLAVTGQTFAEVAAERLGATAE
VTA

Sequences:

>Translated_403_residues
MPVIELAHLTPAQKRAYVIADNRLALDAGWDEAMLALEFAELADAGYDLDLTGFSASEIEGLLDQIEDTEPTADEDASAQ
EGDADEDDVAPPTVAVTRPGDLWLLGEHRLLCADSSDAAAVALLLDGERAHLLFTSPPYANQREYTTGGVADWDVLMQGV
FGTARAALRDEAQVLVNLGLVHRDNEWQPYWDGWIEWMRTQGWRRFGWYVWDQSVTVPGDWAGRLAPRHEFVFHFNRQAR
KPNKIVPCKWAGHETHLRADGSSTAMRGKDGKVGEWNHAGTPTQEFRIPDSVVEVTRQRGRIGDGIDHPAVFPLGLPKFF
IEAYSDEAEIVFEPFSGSGTTLLAGQLTGRKVRAIELAPEYVDVALRRWLQHHPGTAPVLAVTGQTFAEVAAERLGATAE
VTA
>Mature_402_residues
PVIELAHLTPAQKRAYVIADNRLALDAGWDEAMLALEFAELADAGYDLDLTGFSASEIEGLLDQIEDTEPTADEDASAQE
GDADEDDVAPPTVAVTRPGDLWLLGEHRLLCADSSDAAAVALLLDGERAHLLFTSPPYANQREYTTGGVADWDVLMQGVF
GTARAALRDEAQVLVNLGLVHRDNEWQPYWDGWIEWMRTQGWRRFGWYVWDQSVTVPGDWAGRLAPRHEFVFHFNRQARK
PNKIVPCKWAGHETHLRADGSSTAMRGKDGKVGEWNHAGTPTQEFRIPDSVVEVTRQRGRIGDGIDHPAVFPLGLPKFFI
EAYSDEAEIVFEPFSGSGTTLLAGQLTGRKVRAIELAPEYVDVALRRWLQHHPGTAPVLAVTGQTFAEVAAERLGATAEV
TA

Specific function: Unknown

COG id: COG0863

COG function: function code L; DNA modification methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.72 [C]

Molecular weight: Translated: 44416; Mature: 44285

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00093 N4_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVIELAHLTPAQKRAYVIADNRLALDAGWDEAMLALEFAELADAGYDLDLTGFSASEIE
CCCEEECCCCCCHHCEEEEECCEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHH
GLLDQIEDTEPTADEDASAQEGDADEDDVAPPTVAVTRPGDLWLLGEHRLLCADSSDAAA
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCEEEEECCCCCEE
VALLLDGERAHLLFTSPPYANQREYTTGGVADWDVLMQGVFGTARAALRDEAQVLVNLGL
EEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECE
VHRDNEWQPYWDGWIEWMRTQGWRRFGWYVWDQSVTVPGDWAGRLAPRHEFVFHFNRQAR
EEECCCCCCHHHHHHHHHHHCCCEEEEEEEECCEEECCCCCCCCCCCCEEEEEEECHHCC
KPNKIVPCKWAGHETHLRADGSSTAMRGKDGKVGEWNHAGTPTQEFRIPDSVVEVTRQRG
CCCCEEEEEECCCCEEEECCCCCCEECCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCC
RIGDGIDHPAVFPLGLPKFFIEAYSDEAEIVFEPFSGSGTTLLAGQLTGRKVRAIELAPE
CCCCCCCCCEECCCCCHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEEECHH
YVDVALRRWLQHHPGTAPVLAVTGQTFAEVAAERLGATAEVTA
HHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure 
PVIELAHLTPAQKRAYVIADNRLALDAGWDEAMLALEFAELADAGYDLDLTGFSASEIE
CCEEECCCCCCHHCEEEEECCEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHH
GLLDQIEDTEPTADEDASAQEGDADEDDVAPPTVAVTRPGDLWLLGEHRLLCADSSDAAA
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCEEEEECCCCCEE
VALLLDGERAHLLFTSPPYANQREYTTGGVADWDVLMQGVFGTARAALRDEAQVLVNLGL
EEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECE
VHRDNEWQPYWDGWIEWMRTQGWRRFGWYVWDQSVTVPGDWAGRLAPRHEFVFHFNRQAR
EEECCCCCCHHHHHHHHHHHCCCEEEEEEEECCEEECCCCCCCCCCCCEEEEEEECHHCC
KPNKIVPCKWAGHETHLRADGSSTAMRGKDGKVGEWNHAGTPTQEFRIPDSVVEVTRQRG
CCCCEEEEEECCCCEEEECCCCCCEECCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCC
RIGDGIDHPAVFPLGLPKFFIEAYSDEAEIVFEPFSGSGTTLLAGQLTGRKVRAIELAPE
CCCCCCCCCEECCCCCHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEEECHH
YVDVALRRWLQHHPGTAPVLAVTGQTFAEVAAERLGATAEVTA
HHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; DNA Adenine; DNA [C]

Specific reaction: S-Adenosyl-L-Methionine + DNA Adenine = S-Adenosyl-L-Homocysteine + DNA 6-Methylaminopurine. Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA