| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is ynaK [H]
Identifier: 161525447
GI number: 161525447
Start: 2488925
End: 2490190
Strand: Direct
Name: ynaK [H]
Synonym: Bmul_2277
Alternate gene names: 161525447
Gene position: 2488925-2490190 (Clockwise)
Preceding gene: 161525446
Following gene: 161525449
Centisome position: 72.17
GC content: 66.75
Gene sequence:
>1266_bases ATGAGCTGGCTGGCCGACCGCATCGAGCATTGGTCGCTCGACAAGCTGCTGCCCTACGTCCGGAACGCGCGCCTGCACTC GGACGAGCAAGTGGCGCAGATTGCGGCATCGATTGCCGAATTCGGTTTCGTGAATCCTTGTCTCGTGGGCGCCGACGGTG TTCTGGTCGCGGGCCACGGGCGCCTCGCTGCCGCACGCAAGCTGGGCCTGACCACCGTTCCGGTGGTGGTGCTCGATCAT CTGACGCCGACCCAGCGCCGCGCCTTGGTGCTCGCGGACAATCGGCTCGCGGAACTCGCGACCTGGAACGATGCGCTGCT GCGCGTGGAGCTGGAGGCGCTGCAGGACGAAGGCTTCGATCTCGACCTGACCGGATTCGACGCCGATGCGCTGGCCGACT TACTCGCCGGCGAGGAGCCCGAGCACGAGGGCCAGACGGAAGACGACGCCGTTCCCGACGTGCCCGAGGAGCCCGTCTCC CAGCCGGGCGACGTCTGGCTGCTCGGGCCGCACCGCCTCGTCTGCGGCGACGCGACCACCGCCGAGGCCTTCGCGCTCCT GCTCCCGGACGGCGAACGGGCGGACATGGTGTTCACCGATCCGCCCTACAACGTCAACTACGCCAACAGCGCCAAGGACA AACTGCGGGGCAAACACCGCCCCATTCTAAACGATGCGCTGGGCGAAAGCTTCTACGATTTCCTCTACGACGCGCTGGCG CTGATCAATGCACACACGCGCGGCGCGATCTACGTCGCCATGTCGTCGAGTGAGCTGGACACGCTGCAAGCGGCCTTCCG CGCCGTCGGCGGCCACTGGTCGACCTTCATCATCTGGGCGAAGAACACCTTCACGCTCGGCCGCGCCGACTATCAGCGCC AATACGAGCCGATCCTCTACGGCTGGCCGGAGGGCGCCGAGCGCTATTGGTGCGGCGACCGCGACCAGGGCGACGTGTGG CAAATCAAGAAGCCGCAGAAGAACGACCTGCACCCGACCATGAAGCCGGTGGAGTTGGTCGAACGCGCGATCCGCAATTC GAGCCGCCCCGGTGATGTGGTGCTCGATCCGTTCGGTGGCTCGGGCACGACCCTGATCGCCGCCGAGAAGGCCGGGCGCG TGGCGCGCCTGATCGAACTCGATCCGAAGTACACGGACGTGATCGTCCGGCGCTGGCAGGAGTGGACGGGCAAGCAGGCC ACCCGAGAGGCGGATGGCCTGGCGTTCGATCAGGCGACGAGTTCCTCCTCGACAATCTCGCAGTGA
Upstream 100 bases:
>100_bases TGCAGCACCACCCGGGCACAGCGCCGGTGCTTGCCGTGACGGGCCAGACCTTCGCCGAGGTCGCCGCCGAGCGACTGGGC GCTACGGCAGAGGTCACTGC
Downstream 100 bases:
>100_bases ATCACGAAGCCCGTGAGGTACGGCAGGTGACTCGGGATGCCGTAGTCCCTGCTGTTGCGACGGCCGATTTTCCAGCCCAT CCACTTCTTGGTGGCGGCGG
Product: DNA methylase N-4/N-6 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MSWLADRIEHWSLDKLLPYVRNARLHSDEQVAQIAASIAEFGFVNPCLVGADGVLVAGHGRLAAARKLGLTTVPVVVLDH LTPTQRRALVLADNRLAELATWNDALLRVELEALQDEGFDLDLTGFDADALADLLAGEEPEHEGQTEDDAVPDVPEEPVS QPGDVWLLGPHRLVCGDATTAEAFALLLPDGERADMVFTDPPYNVNYANSAKDKLRGKHRPILNDALGESFYDFLYDALA LINAHTRGAIYVAMSSSELDTLQAAFRAVGGHWSTFIIWAKNTFTLGRADYQRQYEPILYGWPEGAERYWCGDRDQGDVW QIKKPQKNDLHPTMKPVELVERAIRNSSRPGDVVLDPFGGSGTTLIAAEKAGRVARLIELDPKYTDVIVRRWQEWTGKQA TREADGLAFDQATSSSSTISQ
Sequences:
>Translated_421_residues MSWLADRIEHWSLDKLLPYVRNARLHSDEQVAQIAASIAEFGFVNPCLVGADGVLVAGHGRLAAARKLGLTTVPVVVLDH LTPTQRRALVLADNRLAELATWNDALLRVELEALQDEGFDLDLTGFDADALADLLAGEEPEHEGQTEDDAVPDVPEEPVS QPGDVWLLGPHRLVCGDATTAEAFALLLPDGERADMVFTDPPYNVNYANSAKDKLRGKHRPILNDALGESFYDFLYDALA LINAHTRGAIYVAMSSSELDTLQAAFRAVGGHWSTFIIWAKNTFTLGRADYQRQYEPILYGWPEGAERYWCGDRDQGDVW QIKKPQKNDLHPTMKPVELVERAIRNSSRPGDVVLDPFGGSGTTLIAAEKAGRVARLIELDPKYTDVIVRRWQEWTGKQA TREADGLAFDQATSSSSTISQ >Mature_420_residues SWLADRIEHWSLDKLLPYVRNARLHSDEQVAQIAASIAEFGFVNPCLVGADGVLVAGHGRLAAARKLGLTTVPVVVLDHL TPTQRRALVLADNRLAELATWNDALLRVELEALQDEGFDLDLTGFDADALADLLAGEEPEHEGQTEDDAVPDVPEEPVSQ PGDVWLLGPHRLVCGDATTAEAFALLLPDGERADMVFTDPPYNVNYANSAKDKLRGKHRPILNDALGESFYDFLYDALAL INAHTRGAIYVAMSSSELDTLQAAFRAVGGHWSTFIIWAKNTFTLGRADYQRQYEPILYGWPEGAERYWCGDRDQGDVWQ IKKPQKNDLHPTMKPVELVERAIRNSSRPGDVVLDPFGGSGTTLIAAEKAGRVARLIELDPKYTDVIVRRWQEWTGKQAT READGLAFDQATSSSSTISQ
Specific function: Unknown
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787628, Length=81, Percent_Identity=48.1481481481481, Blast_Score=82, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003115 [H]
Pfam domain/function: PF02195 ParBc [H]
EC number: NA
Molecular weight: Translated: 46470; Mature: 46339
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWLADRIEHWSLDKLLPYVRNARLHSDEQVAQIAASIAEFGFVNPCLVGADGVLVAGHG CCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCEEEECCC RLAAARKLGLTTVPVVVLDHLTPTQRRALVLADNRLAELATWNDALLRVELEALQDEGFD CHHHHHHCCCCHHHHHHHHCCCCCHHCEEEEECCCHHHHHCCCCCEEEEEEEHHHCCCCE LDLTGFDADALADLLAGEEPEHEGQTEDDAVPDVPEEPVSQPGDVWLLGPHRLVCGDATT EEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCC AEAFALLLPDGERADMVFTDPPYNVNYANSAKDKLRGKHRPILNDALGESFYDFLYDALA CCEEEEEECCCCCCCEEECCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LINAHTRGAIYVAMSSSELDTLQAAFRAVGGHWSTFIIWAKNTFTLGRADYQRQYEPILY HHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCEEEECCHHHHHCCCCEEE GWPEGAERYWCGDRDQGDVWQIKKPQKNDLHPTMKPVELVERAIRNSSRPGDVVLDPFGG ECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCC SGTTLIAAEKAGRVARLIELDPKYTDVIVRRWQEWTGKQATREADGLAFDQATSSSSTIS CCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHCCCEECCCCCCCCCCC Q C >Mature Secondary Structure SWLADRIEHWSLDKLLPYVRNARLHSDEQVAQIAASIAEFGFVNPCLVGADGVLVAGHG CHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCEEEECCC RLAAARKLGLTTVPVVVLDHLTPTQRRALVLADNRLAELATWNDALLRVELEALQDEGFD CHHHHHHCCCCHHHHHHHHCCCCCHHCEEEEECCCHHHHHCCCCCEEEEEEEHHHCCCCE LDLTGFDADALADLLAGEEPEHEGQTEDDAVPDVPEEPVSQPGDVWLLGPHRLVCGDATT EEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCC AEAFALLLPDGERADMVFTDPPYNVNYANSAKDKLRGKHRPILNDALGESFYDFLYDALA CCEEEEEECCCCCCCEEECCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LINAHTRGAIYVAMSSSELDTLQAAFRAVGGHWSTFIIWAKNTFTLGRADYQRQYEPILY HHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCEEEECCHHHHHCCCCEEE GWPEGAERYWCGDRDQGDVWQIKKPQKNDLHPTMKPVELVERAIRNSSRPGDVVLDPFGG ECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCC SGTTLIAAEKAGRVARLIELDPKYTDVIVRRWQEWTGKQATREADGLAFDQATSSSSTIS CCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHCCCEECCCCCCCCCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]