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The map label for this gene is ydfF [H]

Identifier: 161525386

GI number: 161525386

Start: 2430582

End: 2431337

Strand: Direct

Name: ydfF [H]

Synonym: Bmul_2216

Alternate gene names: 161525386

Gene position: 2430582-2431337 (Clockwise)

Preceding gene: 161525383

Following gene: 161525387

Centisome position: 70.48

GC content: 74.34

Gene sequence:

>756_bases
ATGCCGACAGCGCCTACACTGCGAATCGTTCCCAGACGAGAGACGACCATGAGCGACCACGACGATCACCACTTTCCGGG
CCTGAACCGCATCGGCGCGCTGCTGGCCGACCCGGGCCGCGCGGCGATGCTGTGGGCGCTGATGGACGGCAGCGCGCGGC
CGGCCGGCGAGCTGACGCTGATCGCGGGGCTGTCGCCGTCGGCGGCCAGTGCGCATCTCGCGCGGCTGACCGAAGGCGGG
CTGCTCGCCCTCGAGGTGCGCGGCCGGCACCGCTACTACCGGCTCGCCTCGGCCGACATCGCGGCATCGCTCGAAGCGCT
CGCGAACGTCGCGCGTGCGGCCGCGCCGCACCGGCCGGTGCCGCCGCCCTCGCGCACGGTGCCGGCCGAGCTGCGCTACG
CGCGCACCTGCTACGACCACATGGCGGGCGAACTCGCAGTGCGCATCTTCGACAGCCTCAACGCGCGCGGCTGGCTGCAC
GCGAACGGCGATGCGATCGAGACGACCGAACTCGGCGCGCAGGCGCTCGCACGCTGGGGCATCGACGTCGCGCAGCAGCG
CGCGCGGCGGCGCCGCTTCGCGTGCGAATGCCTGGACTGGAGCGAGCGCCGCGCGCATCTGGGCGGTGCGCTCGGCGCCG
CGATGCTCGACAGCTTCTGCGCGCACGGCTGGGTCGAGCGCACCTCGCGCCCGCGCGTGCTGCGCGTGACGGTGCCCGGA
CAGCAGGCGCTCGACGCCTGGCTGACGACCGGCTGA

Upstream 100 bases:

>100_bases
CTGCGGATCCGCGCCGCGCCGGTCGACCGCTGTCGGCGGGTGTGCGGCTGTGCCGCTGCGTCGGGCCGCATCGACATTTC
AGCCGAGCCCGAAACATCGA

Downstream 100 bases:

>100_bases
CGCGCACATTGCACGCGCACGACAACGAGGCGCGATGGACAGGTTTTGTTACATCGCCGCCGATCGGACTTACAAAACGC
CGCGCACTGAAACAGATCGA

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MPTAPTLRIVPRRETTMSDHDDHHFPGLNRIGALLADPGRAAMLWALMDGSARPAGELTLIAGLSPSAASAHLARLTEGG
LLALEVRGRHRYYRLASADIAASLEALANVARAAAPHRPVPPPSRTVPAELRYARTCYDHMAGELAVRIFDSLNARGWLH
ANGDAIETTELGAQALARWGIDVAQQRARRRRFACECLDWSERRAHLGGALGAAMLDSFCAHGWVERTSRPRVLRVTVPG
QQALDAWLTTG

Sequences:

>Translated_251_residues
MPTAPTLRIVPRRETTMSDHDDHHFPGLNRIGALLADPGRAAMLWALMDGSARPAGELTLIAGLSPSAASAHLARLTEGG
LLALEVRGRHRYYRLASADIAASLEALANVARAAAPHRPVPPPSRTVPAELRYARTCYDHMAGELAVRIFDSLNARGWLH
ANGDAIETTELGAQALARWGIDVAQQRARRRRFACECLDWSERRAHLGGALGAAMLDSFCAHGWVERTSRPRVLRVTVPG
QQALDAWLTTG
>Mature_250_residues
PTAPTLRIVPRRETTMSDHDDHHFPGLNRIGALLADPGRAAMLWALMDGSARPAGELTLIAGLSPSAASAHLARLTEGGL
LALEVRGRHRYYRLASADIAASLEALANVARAAAPHRPVPPPSRTVPAELRYARTCYDHMAGELAVRIFDSLNARGWLHA
NGDAIETTELGAQALARWGIDVAQQRARRRRFACECLDWSERRAHLGGALGAAMLDSFCAHGWVERTSRPRVLRVTVPGQ
QALDAWLTTG

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 27239; Mature: 27108

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTAPTLRIVPRRETTMSDHDDHHFPGLNRIGALLADPGRAAMLWALMDGSARPAGELTL
CCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEE
IAGLSPSAASAHLARLTEGGLLALEVRGRHRYYRLASADIAASLEALANVARAAAPHRPV
EECCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCC
PPPSRTVPAELRYARTCYDHMAGELAVRIFDSLNARGWLHANGDAIETTELGAQALARWG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEHHHHHHHHHHHHC
IDVAQQRARRRRFACECLDWSERRAHLGGALGAAMLDSFCAHGWVERTSRPRVLRVTVPG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
QQALDAWLTTG
HHHHHHHHCCC
>Mature Secondary Structure 
PTAPTLRIVPRRETTMSDHDDHHFPGLNRIGALLADPGRAAMLWALMDGSARPAGELTL
CCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEE
IAGLSPSAASAHLARLTEGGLLALEVRGRHRYYRLASADIAASLEALANVARAAAPHRPV
EECCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCC
PPPSRTVPAELRYARTCYDHMAGELAVRIFDSLNARGWLHANGDAIETTELGAQALARWG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEHHHHHHHHHHHHC
IDVAQQRARRRRFACECLDWSERRAHLGGALGAAMLDSFCAHGWVERTSRPRVLRVTVPG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
QQALDAWLTTG
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]