| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
Click here to switch to the map view.
The map label for this gene is 161525001
Identifier: 161525001
GI number: 161525001
Start: 2009882
End: 2011477
Strand: Reverse
Name: 161525001
Synonym: Bmul_1828
Alternate gene names: NA
Gene position: 2011477-2009882 (Counterclockwise)
Preceding gene: 161525002
Following gene: 161525000
Centisome position: 58.33
GC content: 65.73
Gene sequence:
>1596_bases ATGCCCATCCCGTTCCCGTTCGACTTCCGCGCACCGGACTACGTGCAGGTGTTCGAATGGCGGGCGGAGCGGTTGAATCG CATCCGCGCGAACCCCAGCGTGCTGCCGGCGTTGCGCACGTTTTACCGAGAAAACCCCGCCCAGTTCATCATCGACTGGG GCATGACGTTCGATCCGCGTAACGTCGAGCGCGGGCTGCCGGCGACGATCCCGTTCCTGCTGTTCCCGAAGCAGGAGGAA TGGTGTCAGTGGTTCATGGAGCGCTGGAAGGCGCAGGAGCCCGGCATCACCGAGAAGACGCGCGACATGGGCATGTCATG GCTGACGGTGGGGCTCGCCGACACGATCTGCCTGTTCCATGAAGGCGTCGCGGCCGGCTTCGGCTCGCGCAAAGAAGAGT ACGTAGACAAGATCGGCTCGCCGAAGAGCCTGTTCTGGAAGGCGCGCGAGTTCCTGCGGCTGCTGCCGGCCGAGTTCCGT GGTTCGTGGGACATCGGCACGCACGCGCCGCACATGCGGATCATCTTCCCGGACACCGGGTCGGTGATCACCGGCGAGTC GGGCGACGGTATTGGCCGCGGCGACCGCGCCAGCTTCTATATCGTCGACGAGTCGGCGTTCCTCGAACGCCCGCAGCTGG TCGACGCGTCGCTGTCGGCGACGACGAACTGCCGGCAGGACATCTCCACGCCGAACGGCATGGGGAACTCGTTCGCGCAG CGCCGGCACAGCGGCAAGGTAAAGGTATTCACGTTCCACTGGCGCGACGACCCGCGCAAGGATGACGCCTGGTACGCGAA GCAGTGCGCTGAGCTCGATCCTGTCGTCGTCGCGCAGGAAATCGACATCAACTACGCGGCGTCGGTCGAGGGCGTCGTGA TCCCGTCCGCTTGGGTGCAGGCGGCGATCGGCGCGCACCTGAAGCTCGGCATCGAGCCGAGCGGCACACGGCGCGGCGGC CTGGACGTCGCCGACGAGGGCAAGGACAAGAACGCGTTCGCGGGCCGCTACGGCTTCCTGCTGAACTTCCTGCGTTCGTG GTCGGGCAAAGGCGGCGACATCTACGAGACGGTCGAGAAGACGTTCGGCATCTGCGACGAGCTCGGCTACGAGTCGTTCG ACTACGACGCCGACGGCCTCGGTGCTGGCGTGCGCGGCGACGCGCGCGTGATCAACGAGCAGCGCATTGCGATCGGCAAG CGGCCGATCAACGACGAGCCGTTCCGCGGCTCCGGCCCGGTGCACGATCCCGAAGGCGAGATGGTGCCGGAGCGTAAGAA CAAGGACTACTTCGCCAACCTCAAGGCGCAGTCCTGGTGGGCGCTGCGGCTGCGCTTCCAGGCGACGTACCGCGCGGTCG TCGAGGGCAAGCCGTACAACCCCGACGACATCATCTCGATCGACCCGGAGCTGAAGGAGCTGGCCGCGCTGACGATGGAG TTGTCGCAGCCGACCTACACCGTCAACGGCGTCGGGAAGATCGTTATCGACAAGGCGCCGGACGGCACGAAATCGCCGAA CCTGGCTGACGCGGTCATGATCGCATACCAGCCGGCCGGTCAGGTTCTGGACATCTGGACAAGGTTGGCAGGATGA
Upstream 100 bases:
>100_bases GTGACGGGCAAGGACGGCGGCCCGGTGCAGTCGATCTCCACCGTGACGAACGATCCGATCGAAGCCGCGAAGCTGTACGC GCAGTTGATGAACCCATAGC
Downstream 100 bases:
>100_bases ATCGAAAGCAACGCAAGGCCGAGCAGCGGCAGTACCGCGCGATGGCTGCGGATTCCGCCAACGCGAAGCGCTGGTTGACG CCGGACAGCTTCCAGAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MPIPFPFDFRAPDYVQVFEWRAERLNRIRANPSVLPALRTFYRENPAQFIIDWGMTFDPRNVERGLPATIPFLLFPKQEE WCQWFMERWKAQEPGITEKTRDMGMSWLTVGLADTICLFHEGVAAGFGSRKEEYVDKIGSPKSLFWKAREFLRLLPAEFR GSWDIGTHAPHMRIIFPDTGSVITGESGDGIGRGDRASFYIVDESAFLERPQLVDASLSATTNCRQDISTPNGMGNSFAQ RRHSGKVKVFTFHWRDDPRKDDAWYAKQCAELDPVVVAQEIDINYAASVEGVVIPSAWVQAAIGAHLKLGIEPSGTRRGG LDVADEGKDKNAFAGRYGFLLNFLRSWSGKGGDIYETVEKTFGICDELGYESFDYDADGLGAGVRGDARVINEQRIAIGK RPINDEPFRGSGPVHDPEGEMVPERKNKDYFANLKAQSWWALRLRFQATYRAVVEGKPYNPDDIISIDPELKELAALTME LSQPTYTVNGVGKIVIDKAPDGTKSPNLADAVMIAYQPAGQVLDIWTRLAG
Sequences:
>Translated_531_residues MPIPFPFDFRAPDYVQVFEWRAERLNRIRANPSVLPALRTFYRENPAQFIIDWGMTFDPRNVERGLPATIPFLLFPKQEE WCQWFMERWKAQEPGITEKTRDMGMSWLTVGLADTICLFHEGVAAGFGSRKEEYVDKIGSPKSLFWKAREFLRLLPAEFR GSWDIGTHAPHMRIIFPDTGSVITGESGDGIGRGDRASFYIVDESAFLERPQLVDASLSATTNCRQDISTPNGMGNSFAQ RRHSGKVKVFTFHWRDDPRKDDAWYAKQCAELDPVVVAQEIDINYAASVEGVVIPSAWVQAAIGAHLKLGIEPSGTRRGG LDVADEGKDKNAFAGRYGFLLNFLRSWSGKGGDIYETVEKTFGICDELGYESFDYDADGLGAGVRGDARVINEQRIAIGK RPINDEPFRGSGPVHDPEGEMVPERKNKDYFANLKAQSWWALRLRFQATYRAVVEGKPYNPDDIISIDPELKELAALTME LSQPTYTVNGVGKIVIDKAPDGTKSPNLADAVMIAYQPAGQVLDIWTRLAG >Mature_530_residues PIPFPFDFRAPDYVQVFEWRAERLNRIRANPSVLPALRTFYRENPAQFIIDWGMTFDPRNVERGLPATIPFLLFPKQEEW CQWFMERWKAQEPGITEKTRDMGMSWLTVGLADTICLFHEGVAAGFGSRKEEYVDKIGSPKSLFWKAREFLRLLPAEFRG SWDIGTHAPHMRIIFPDTGSVITGESGDGIGRGDRASFYIVDESAFLERPQLVDASLSATTNCRQDISTPNGMGNSFAQR RHSGKVKVFTFHWRDDPRKDDAWYAKQCAELDPVVVAQEIDINYAASVEGVVIPSAWVQAAIGAHLKLGIEPSGTRRGGL DVADEGKDKNAFAGRYGFLLNFLRSWSGKGGDIYETVEKTFGICDELGYESFDYDADGLGAGVRGDARVINEQRIAIGKR PINDEPFRGSGPVHDPEGEMVPERKNKDYFANLKAQSWWALRLRFQATYRAVVEGKPYNPDDIISIDPELKELAALTMEL SQPTYTVNGVGKIVIDKAPDGTKSPNLADAVMIAYQPAGQVLDIWTRLAG
Specific function: Unknown
COG id: COG1783
COG function: function code R; Phage terminase large subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006701 - InterPro: IPR006437 [H]
Pfam domain/function: PF04466 Terminase_3 [H]
EC number: NA
Molecular weight: Translated: 59489; Mature: 59358
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIPFPFDFRAPDYVQVFEWRAERLNRIRANPSVLPALRTFYRENPAQFIIDWGMTFDPR CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCC NVERGLPATIPFLLFPKQEEWCQWFMERWKAQEPGITEKTRDMGMSWLTVGLADTICLFH CCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHH EGVAAGFGSRKEEYVDKIGSPKSLFWKAREFLRLLPAEFRGSWDIGTHAPHMRIIFPDTG HHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC SVITGESGDGIGRGDRASFYIVDESAFLERPQLVDASLSATTNCRQDISTPNGMGNSFAQ CEEECCCCCCCCCCCCEEEEEEECHHHHCCCCHHCCHHHCCCHHHHHCCCCCCCCHHHHH RRHSGKVKVFTFHWRDDPRKDDAWYAKQCAELDPVVVAQEIDINYAASVEGVVIPSAWVQ HHHCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCEEEEEEECCEEECCCCCEEECHHHHH AAIGAHLKLGIEPSGTRRGGLDVADEGKDKNAFAGRYGFLLNFLRSWSGKGGDIYETVEK HHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH TFGICDELGYESFDYDADGLGAGVRGDARVINEQRIAIGKRPINDEPFRGSGPVHDPEGE HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCHHHEECCCCCCCCCCCCCCCCCCCCCC MVPERKNKDYFANLKAQSWWALRLRFQATYRAVVEGKPYNPDDIISIDPELKELAALTME CCCCCCCCCEEEECCCCCEEEEEEEEEEEEEHEECCCCCCCCCEEECCHHHHHHHHHHHH LSQPTYTVNGVGKIVIDKAPDGTKSPNLADAVMIAYQPAGQVLDIWTRLAG HCCCEEEECCCEEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCC >Mature Secondary Structure PIPFPFDFRAPDYVQVFEWRAERLNRIRANPSVLPALRTFYRENPAQFIIDWGMTFDPR CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCC NVERGLPATIPFLLFPKQEEWCQWFMERWKAQEPGITEKTRDMGMSWLTVGLADTICLFH CCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHH EGVAAGFGSRKEEYVDKIGSPKSLFWKAREFLRLLPAEFRGSWDIGTHAPHMRIIFPDTG HHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC SVITGESGDGIGRGDRASFYIVDESAFLERPQLVDASLSATTNCRQDISTPNGMGNSFAQ CEEECCCCCCCCCCCCEEEEEEECHHHHCCCCHHCCHHHCCCHHHHHCCCCCCCCHHHHH RRHSGKVKVFTFHWRDDPRKDDAWYAKQCAELDPVVVAQEIDINYAASVEGVVIPSAWVQ HHHCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCEEEEEEECCEEECCCCCEEECHHHHH AAIGAHLKLGIEPSGTRRGGLDVADEGKDKNAFAGRYGFLLNFLRSWSGKGGDIYETVEK HHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH TFGICDELGYESFDYDADGLGAGVRGDARVINEQRIAIGKRPINDEPFRGSGPVHDPEGE HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCHHHEECCCCCCCCCCCCCCCCCCCCCC MVPERKNKDYFANLKAQSWWALRLRFQATYRAVVEGKPYNPDDIISIDPELKELAALTME CCCCCCCCCEEEECCCCCEEEEEEEEEEEEEHEECCCCCCCCCEEECCHHHHHHHHHHHH LSQPTYTVNGVGKIVIDKAPDGTKSPNLADAVMIAYQPAGQVLDIWTRLAG HCCCEEEECCCEEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]