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The map label for this gene is 161525002

Identifier: 161525002

GI number: 161525002

Start: 2011479

End: 2012042

Strand: Reverse

Name: 161525002

Synonym: Bmul_1829

Alternate gene names: NA

Gene position: 2012042-2011479 (Counterclockwise)

Preceding gene: 161525003

Following gene: 161525001

Centisome position: 58.35

GC content: 60.28

Gene sequence:

>564_bases
ATGCGGAAACTCACCCCCAAGCAGCAGCGCTTTGTCGACGAGTATCTGGTCGACCTGAACGCGACGCAGGCGGCGATCCG
CGCGGGATACAGCCCGAAGACGGCATATCGGATTGGTGCCGAGCTACTTCAGAAAACCTCAGTCGCGGCGGCGCTTGCCG
AATGCATGAAGGCGCGTCGGCAGCGCACGCAGGTCGACGCGGACTACGTGCTGCAGCGCATGATCGAAATTGATCAGATG
GACGTGCTCGACATCATGACCGACGACATGGCGCTCAAGCCCGTGAGCGATTGGCCGAAAGTCTGGCGGCAATACCTCAG
CGGGTTTGATCTGGCTGAAATGTTCGACGGCACCGGCGACGCGCGCGAGATGGTTGGCATCCTGAAGAAGATCAAGTGGC
CCGACAAGGTAAAGAACCTCGAGCTGCTTGGCCGCCATCTGGGCATGTTCAAAGACAAGGTCGAGGTGACGGGCAAGGAC
GGCGGCCCGGTGCAGTCGATCTCCACCGTGACGAACGATCCGATCGAAGCCGCGAAGCTGTACGCGCAGTTGATGAACCC
ATAG

Upstream 100 bases:

>100_bases
CTCCGGAGCCGTGATTCCCCGCTCGCCGCGCAATGCGGATGGCAGCCGGGAACAGACCGGCGAGAATTTTTCAGGTGAAG
CGACAGCTTCTCATAACCAC

Downstream 100 bases:

>100_bases
CATGCCCATCCCGTTCCCGTTCGACTTCCGCGCACCGGACTACGTGCAGGTGTTCGAATGGCGGGCGGAGCGGTTGAATC
GCATCCGCGCGAACCCCAGC

Product: terminase small subunit

Products: NA

Alternate protein names: Phage Terminase Small Subunit; Phage Terminase; Terminase Small Subunit Superfamily; Bacteriophage Terminase Small Subunit

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRKLTPKQQRFVDEYLVDLNATQAAIRAGYSPKTAYRIGAELLQKTSVAAALAECMKARRQRTQVDADYVLQRMIEIDQM
DVLDIMTDDMALKPVSDWPKVWRQYLSGFDLAEMFDGTGDAREMVGILKKIKWPDKVKNLELLGRHLGMFKDKVEVTGKD
GGPVQSISTVTNDPIEAAKLYAQLMNP

Sequences:

>Translated_187_residues
MRKLTPKQQRFVDEYLVDLNATQAAIRAGYSPKTAYRIGAELLQKTSVAAALAECMKARRQRTQVDADYVLQRMIEIDQM
DVLDIMTDDMALKPVSDWPKVWRQYLSGFDLAEMFDGTGDAREMVGILKKIKWPDKVKNLELLGRHLGMFKDKVEVTGKD
GGPVQSISTVTNDPIEAAKLYAQLMNP
>Mature_187_residues
MRKLTPKQQRFVDEYLVDLNATQAAIRAGYSPKTAYRIGAELLQKTSVAAALAECMKARRQRTQVDADYVLQRMIEIDQM
DVLDIMTDDMALKPVSDWPKVWRQYLSGFDLAEMFDGTGDAREMVGILKKIKWPDKVKNLELLGRHLGMFKDKVEVTGKD
GGPVQSISTVTNDPIEAAKLYAQLMNP

Specific function: Unknown

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21111; Mature: 21111

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLTPKQQRFVDEYLVDLNATQAAIRAGYSPKTAYRIGAELLQKTSVAAALAECMKARR
CCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRTQVDADYVLQRMIEIDQMDVLDIMTDDMALKPVSDWPKVWRQYLSGFDLAEMFDGTGD
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCC
AREMVGILKKIKWPDKVKNLELLGRHLGMFKDKVEVTGKDGGPVQSISTVTNDPIEAAKL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHCCCHHHHHHH
YAQLMNP
HHHHHCC
>Mature Secondary Structure
MRKLTPKQQRFVDEYLVDLNATQAAIRAGYSPKTAYRIGAELLQKTSVAAALAECMKARR
CCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRTQVDADYVLQRMIEIDQMDVLDIMTDDMALKPVSDWPKVWRQYLSGFDLAEMFDGTGD
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCC
AREMVGILKKIKWPDKVKNLELLGRHLGMFKDKVEVTGKDGGPVQSISTVTNDPIEAAKL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHCCCHHHHHHH
YAQLMNP
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA