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The map label for this gene is rimP [H]

Identifier: 161524930

GI number: 161524930

Start: 1946105

End: 1946563

Strand: Reverse

Name: rimP [H]

Synonym: Bmul_1757

Alternate gene names: 161524930

Gene position: 1946563-1946105 (Counterclockwise)

Preceding gene: 161524931

Following gene: 161524929

Centisome position: 56.45

GC content: 59.26

Gene sequence:

>459_bases
GTGCAACTGACGGAACTGATAGAAACCACGGTCACCGGGCTCGGCTACGAGCTCGTGGATCTCGAGCGCACCGGGCGCGG
CATGCTTTGCGTCTATATCGATCAGCCTGCCGGCATCTCGCTCGAAGATTGCGAAAAGGTCACGCGTCAGCTCCAGCACG
TCTTGACGGTCGAAAACATCGATTACGAACGGCTCGAAGTCTCGTCTCCGGGGCTCGACCGCCCGTTGAAGAAGCTGGCC
GACTTCGAGCGCTTCGCCGGCAGTGAAGTCTCCGTGACCTTGAAAAAGCCGCTGGACGGGCGCAAGACGTACCGGGGCAT
TCTGCACGCGCCGAACGGCGAAACGATCGGTTTGGAATTTGAGAGGAAGAAGGGCGAGGCGGCCATGCTGGATTTCACGC
TGGCCGACATCGACAAAGCCCGCCTGATTCCGCAAGTTGACTTTAGGAGCCGCAAATAA

Upstream 100 bases:

>100_bases
TGAAACGGTTAGGCATCTCGGGTAGCGCTTCCTGCGCCGGCTAAGGCGCGCGCCCGCGGGTGAATCGCGAGCGGCGGGCG
CGAACACCTGAGAGGACACT

Downstream 100 bases:

>100_bases
TGAGTCGCGAAGTTTTGATGCTGGTGGATGCGCTGGCGCGCGAGAAAAACGTCGACAAGGATGTGGTGCTGGGCGCGCTC
GAGGCTGCGCTCGCGTCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MQLTELIETTVTGLGYELVDLERTGRGMLCVYIDQPAGISLEDCEKVTRQLQHVLTVENIDYERLEVSSPGLDRPLKKLA
DFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEFERKKGEAAMLDFTLADIDKARLIPQVDFRSRK

Sequences:

>Translated_152_residues
MQLTELIETTVTGLGYELVDLERTGRGMLCVYIDQPAGISLEDCEKVTRQLQHVLTVENIDYERLEVSSPGLDRPLKKLA
DFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEFERKKGEAAMLDFTLADIDKARLIPQVDFRSRK
>Mature_152_residues
MQLTELIETTVTGLGYELVDLERTGRGMLCVYIDQPAGISLEDCEKVTRQLQHVLTVENIDYERLEVSSPGLDRPLKKLA
DFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEFERKKGEAAMLDFTLADIDKARLIPQVDFRSRK

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=149, Percent_Identity=40.2684563758389, Blast_Score=101, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 17139; Mature: 17139

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTELIETTVTGLGYELVDLERTGRGMLCVYIDQPAGISLEDCEKVTRQLQHVLTVENI
CCHHHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEF
CCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHCCEEECCCCCEEEEEE
ERKKGEAAMLDFTLADIDKARLIPQVDFRSRK
ECCCCCEEEEEEEHHCCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MQLTELIETTVTGLGYELVDLERTGRGMLCVYIDQPAGISLEDCEKVTRQLQHVLTVENI
CCHHHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
DYERLEVSSPGLDRPLKKLADFERFAGSEVSVTLKKPLDGRKTYRGILHAPNGETIGLEF
CCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHCCEEECCCCCEEEEEE
ERKKGEAAMLDFTLADIDKARLIPQVDFRSRK
ECCCCCEEEEEEEHHCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA