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The map label for this gene is selU [H]

Identifier: 161524818

GI number: 161524818

Start: 1820311

End: 1821444

Strand: Reverse

Name: selU [H]

Synonym: Bmul_1645

Alternate gene names: 161524818

Gene position: 1821444-1820311 (Counterclockwise)

Preceding gene: 161524819

Following gene: 161524817

Centisome position: 52.82

GC content: 69.75

Gene sequence:

>1134_bases
TTGAAGAACCTGATTGTCACCCTCGATCGCGCCGCCGAGTTCGACGAGATCATCGACGTGCGCACGCCGCTCGAATTCGC
CGAGGACCATATCCCCGGCGCGCTGAACGCGCCCGTGCTCAGCAACGAGGAGCGCGTGCTCGTCGGCACGATGTATCGGC
AGGTGTCGCCGTACGAGGCGACGCGCGTCGGCGCGGCGATCGTCGCGCGCAACATCGCGCGCCATCTCGACACGACGTTC
GCCGATCGTCCGCGCAACTGGCGGCCGCTGATCTACTGCTGGCGCGGCGGCAAGCGCTCGGGCTCGATGACGACCTGGTT
CAACCTGATCGGCTGGCAGGCGCGTCAGCTCGACGGCGGCTACAAGGCGTACCGCCGTTCGGTCTGCGCGACGCTCGAGA
CGCTGCCGACGCGCTTTCGCTACATCGCGCTCGTCGGCCATACGGGTTGCGGCAAGACGCGGCTGCTGAACGCGCTGCGC
GGCGCGGGCGCGCAGACGCTCGATCTCGAAGCGCTCGCGTGTCACCGCGGCTCGCTGCTCGGCGCGCTGCCGGGCGTGCC
GCAGCCGTCGCAGAAGGCGTTCGATTCGGGGCTCGTCGAAACACTGCGACGCTACGATCCGGCCTGGCCGGTGTTCGTCG
AATCGGAAAGCCGCAAGATCGGGCTCGTGCAGTTGCCGATCGCGCTGCTCGACGCGTTTCACGCGGGGCCGTGGGTGCAG
GTCGAAGCCGCGCGCGACGAGCGCATCGCGTTCCTGCTCGACGATTACGGCCACCTGTTCGACGATCGCGCCGCATTCGG
CGCGCAGCTCGACCGGCTGATCGGGCTGCACAGCCGCGAAGAGGTGGCGCGCTGGCGCGCGCTGCTCGAGGCCGACCGGC
GCGCGGAACTGTTCGGCACGCTGATCGACCGGCATTACGATCCCGCATACGCGCGCACGTATCGCGCGTCGTACGACAAG
CCGAACCGCGCGCTGAAGTTCGCGTTCCGCCCGAATGCCGCCGACGTGCCGGACCAGGCGCGCACGCTGCTCGAGCAGCT
CGCGCAGGCGGGCTTGCCCGCGTCGCCGGCCTACGCGTCGGCGTCCGCCGCGGCGCCGATTACCGCTCACGACCATCCGA
CCACCTCACGATGA

Upstream 100 bases:

>100_bases
CGGCGCGCGGCTCGCGGCGCCCGCGCGTGAGATAATTGCAGGTCCGCCTTCCTGCGCCCGTGCGGCTCGCCGAGCCGCAC
CGACCCGTTTCGACGCCAAA

Downstream 100 bases:

>100_bases
CGACCACACGCACGCAACCCGTTCCGGCGCTCGGCTGGATGACCTTCCTGCTGATCGCGGTCGCAGGACTGTTCTACGTC
AAATGGTTTCCGTACTACAA

Product: tRNA 2-selenouridine synthase

Products: NA

Alternate protein names: Selenophosphate-dependent tRNA 2-selenouridine synthase [H]

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MKNLIVTLDRAAEFDEIIDVRTPLEFAEDHIPGALNAPVLSNEERVLVGTMYRQVSPYEATRVGAAIVARNIARHLDTTF
ADRPRNWRPLIYCWRGGKRSGSMTTWFNLIGWQARQLDGGYKAYRRSVCATLETLPTRFRYIALVGHTGCGKTRLLNALR
GAGAQTLDLEALACHRGSLLGALPGVPQPSQKAFDSGLVETLRRYDPAWPVFVESESRKIGLVQLPIALLDAFHAGPWVQ
VEAARDERIAFLLDDYGHLFDDRAAFGAQLDRLIGLHSREEVARWRALLEADRRAELFGTLIDRHYDPAYARTYRASYDK
PNRALKFAFRPNAADVPDQARTLLEQLAQAGLPASPAYASASAAAPITAHDHPTTSR

Sequences:

>Translated_377_residues
MKNLIVTLDRAAEFDEIIDVRTPLEFAEDHIPGALNAPVLSNEERVLVGTMYRQVSPYEATRVGAAIVARNIARHLDTTF
ADRPRNWRPLIYCWRGGKRSGSMTTWFNLIGWQARQLDGGYKAYRRSVCATLETLPTRFRYIALVGHTGCGKTRLLNALR
GAGAQTLDLEALACHRGSLLGALPGVPQPSQKAFDSGLVETLRRYDPAWPVFVESESRKIGLVQLPIALLDAFHAGPWVQ
VEAARDERIAFLLDDYGHLFDDRAAFGAQLDRLIGLHSREEVARWRALLEADRRAELFGTLIDRHYDPAYARTYRASYDK
PNRALKFAFRPNAADVPDQARTLLEQLAQAGLPASPAYASASAAAPITAHDHPTTSR
>Mature_377_residues
MKNLIVTLDRAAEFDEIIDVRTPLEFAEDHIPGALNAPVLSNEERVLVGTMYRQVSPYEATRVGAAIVARNIARHLDTTF
ADRPRNWRPLIYCWRGGKRSGSMTTWFNLIGWQARQLDGGYKAYRRSVCATLETLPTRFRYIALVGHTGCGKTRLLNALR
GAGAQTLDLEALACHRGSLLGALPGVPQPSQKAFDSGLVETLRRYDPAWPVFVESESRKIGLVQLPIALLDAFHAGPWVQ
VEAARDERIAFLLDDYGHLFDDRAAFGAQLDRLIGLHSREEVARWRALLEADRRAELFGTLIDRHYDPAYARTYRASYDK
PNRALKFAFRPNAADVPDQARTLLEQLAQAGLPASPAYASASAAAPITAHDHPTTSR

Specific function: Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA [H]

COG id: COG2603

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1786712, Length=353, Percent_Identity=30.3116147308782, Blast_Score=115, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR017582 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 41942; Mature: 41942

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLIVTLDRAAEFDEIIDVRTPLEFAEDHIPGALNAPVLSNEERVLVGTMYRQVSPYEA
CCCEEEEECCHHCHHHHHHCCCCHHHHHHCCCCCCCCCEECCCCEEEEEHHHHHCCCHHH
TRVGAAIVARNIARHLDTTFADRPRNWRPLIYCWRGGKRSGSMTTWFNLIGWQARQLDGG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCHHHHCCCH
YKAYRRSVCATLETLPTRFRYIALVGHTGCGKTRLLNALRGAGAQTLDLEALACHRGSLL
HHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHCCCCCEEEHHHHHHHCCCHH
GALPGVPQPSQKAFDSGLVETLRRYDPAWPVFVESESRKIGLVQLPIALLDAFHAGPWVQ
HCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCEECEEEHHHHHHHHHCCCCCEE
VEAARDERIAFLLDDYGHLFDDRAAFGAQLDRLIGLHSREEVARWRALLEADRRAELFGT
EEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LIDRHYDPAYARTYRASYDKPNRALKFAFRPNAADVPDQARTLLEQLAQAGLPASPAYAS
HHHCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
ASAAAPITAHDHPTTSR
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKNLIVTLDRAAEFDEIIDVRTPLEFAEDHIPGALNAPVLSNEERVLVGTMYRQVSPYEA
CCCEEEEECCHHCHHHHHHCCCCHHHHHHCCCCCCCCCEECCCCEEEEEHHHHHCCCHHH
TRVGAAIVARNIARHLDTTFADRPRNWRPLIYCWRGGKRSGSMTTWFNLIGWQARQLDGG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCHHHHCCCH
YKAYRRSVCATLETLPTRFRYIALVGHTGCGKTRLLNALRGAGAQTLDLEALACHRGSLL
HHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHCCCCCEEEHHHHHHHCCCHH
GALPGVPQPSQKAFDSGLVETLRRYDPAWPVFVESESRKIGLVQLPIALLDAFHAGPWVQ
HCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCEECEEEHHHHHHHHHCCCCCEE
VEAARDERIAFLLDDYGHLFDDRAAFGAQLDRLIGLHSREEVARWRALLEADRRAELFGT
EEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LIDRHYDPAYARTYRASYDKPNRALKFAFRPNAADVPDQARTLLEQLAQAGLPASPAYAS
HHHCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
ASAAAPITAHDHPTTSR
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA