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The map label for this gene is tsf [H]

Identifier: 161524431

GI number: 161524431

Start: 1387568

End: 1388449

Strand: Direct

Name: tsf [H]

Synonym: Bmul_1258

Alternate gene names: 161524431

Gene position: 1387568-1388449 (Clockwise)

Preceding gene: 161524430

Following gene: 161524432

Centisome position: 40.24

GC content: 63.95

Gene sequence:

>882_bases
ATGGCGGCAATTACCGCAAGCATGGTGGCAGAACTGCGCGCAAAGACCGACGCACCGATGATGGAGTGCAAGAAGGCGCT
GACCGAAGCCGACGGCGACATGGCCAAGGCTGAAGAGCTGCTGCGCGTGAAGCTCGGCAACAAGGCGAGCAAGGCGGCAT
CGCGCGTGACGGCCGAAGGCGTCGTCGCATCGTTCGTCGGCGGCAATGCCGGCGCGCTCGTCGAGCTGAACTGCGAAACC
GACTTCGTCGCGAAGAACGACGATTTCAACGCGTTCGCGAAGCAAGTCGCGGAACTCGTCGCGACGAAGAACCCGGTCGA
CGTCGCTGCGCTGTCGGCGCTGCCGCTCGACGGCAAGACGGTCGACGAAGTGCGCCTCGCGCTCGTCGGCAAGATCGGCG
AAAACATCTCGATCCGCCGCTTCGTCCGTTTCGAGACGGCGAACAAGCTGGCGACCTACCTGCACGGCAGCCGCATCGGC
GTGATGGTCGAGTACACGGGCGCGGACGAGCAGGTCGGCAAGGACGTCGCGATGCACGTCGCGGCGATGAAGCCGGTTTC
GCTGTCGGCCGACGAAGTGCCGGCGGACCTGATCGAGAAGGAGCGTCGTGTCGCCGAGCAGAAGGCGGCCGAATCGGGCA
AGCCGGCCGAGATCGTCGCGAAGATGGTCGACGGCAGCGTCCAGAAGTTCCTGAAGGAAGTCTCGCTGCTGAACCAGCCG
TTCGTGAAGAACGACAAGCAGACGATCGAGCAGATGCTGAAGGCCGCGAATGCCGCAGTGCAGAAGTTCGCGCTGTTCGT
CGTCGGCGAAGGCATCGAAAAGCGCCAGGACGATTTCGCCGCCGAAGTGGCCGCGCAAGTCGCAGCAGCAAAGCAGCAGT
AA

Upstream 100 bases:

>100_bases
CCGGACCTGATCGCGCCGTCGCGGCGCGGGTCCGGAAACGAATCTCGGCCGTTCGCGTCCAAGCGGGCGGCGTTGTGAAT
ACAGACTCAAGGAGCGAATG

Downstream 100 bases:

>100_bases
GCCATTGCAGTATCCGCGGCGGGCGTCCGTTCCGCCGCGGCCGGCGGCGCTGCCGGCGGCCGGGAAGCCCGGTCCGGCCG
GCGGCGCTTGCCCGAATCAG

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts [H]

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MAAITASMVAELRAKTDAPMMECKKALTEADGDMAKAEELLRVKLGNKASKAASRVTAEGVVASFVGGNAGALVELNCET
DFVAKNDDFNAFAKQVAELVATKNPVDVAALSALPLDGKTVDEVRLALVGKIGENISIRRFVRFETANKLATYLHGSRIG
VMVEYTGADEQVGKDVAMHVAAMKPVSLSADEVPADLIEKERRVAEQKAAESGKPAEIVAKMVDGSVQKFLKEVSLLNQP
FVKNDKQTIEQMLKAANAAVQKFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ

Sequences:

>Translated_293_residues
MAAITASMVAELRAKTDAPMMECKKALTEADGDMAKAEELLRVKLGNKASKAASRVTAEGVVASFVGGNAGALVELNCET
DFVAKNDDFNAFAKQVAELVATKNPVDVAALSALPLDGKTVDEVRLALVGKIGENISIRRFVRFETANKLATYLHGSRIG
VMVEYTGADEQVGKDVAMHVAAMKPVSLSADEVPADLIEKERRVAEQKAAESGKPAEIVAKMVDGSVQKFLKEVSLLNQP
FVKNDKQTIEQMLKAANAAVQKFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ
>Mature_292_residues
AAITASMVAELRAKTDAPMMECKKALTEADGDMAKAEELLRVKLGNKASKAASRVTAEGVVASFVGGNAGALVELNCETD
FVAKNDDFNAFAKQVAELVATKNPVDVAALSALPLDGKTVDEVRLALVGKIGENISIRRFVRFETANKLATYLHGSRIGV
MVEYTGADEQVGKDVAMHVAAMKPVSLSADEVPADLIEKERRVAEQKAAESGKPAEIVAKMVDGSVQKFLKEVSLLNQPF
VKNDKQTIEQMLKAANAAVQKFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome [H]

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family [H]

Homologues:

Organism=Homo sapiens, GI171846268, Length=235, Percent_Identity=30.6382978723404, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI291084500, Length=256, Percent_Identity=29.296875, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI291084498, Length=100, Percent_Identity=39, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI291084502, Length=100, Percent_Identity=39, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI1786366, Length=285, Percent_Identity=50.5263157894737, Blast_Score=251, Evalue=4e-68,
Organism=Caenorhabditis elegans, GI17561440, Length=294, Percent_Identity=28.2312925170068, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI19921466, Length=292, Percent_Identity=31.8493150684932, Blast_Score=112, Evalue=3e-25,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF00889 EF_TS; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 31222; Mature: 31091

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAITASMVAELRAKTDAPMMECKKALTEADGDMAKAEELLRVKLGNKASKAASRVTAEG
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
VVASFVGGNAGALVELNCETDFVAKNDDFNAFAKQVAELVATKNPVDVAALSALPLDGKT
HHHHHHCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCH
VDEVRLALVGKIGENISIRRFVRFETANKLATYLHGSRIGVMVEYTGADEQVGKDVAMHV
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHH
AAMKPVSLSADEVPADLIEKERRVAEQKAAESGKPAEIVAKMVDGSVQKFLKEVSLLNQP
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
FVKNDKQTIEQMLKAANAAVQKFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AAITASMVAELRAKTDAPMMECKKALTEADGDMAKAEELLRVKLGNKASKAASRVTAEG
CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
VVASFVGGNAGALVELNCETDFVAKNDDFNAFAKQVAELVATKNPVDVAALSALPLDGKT
HHHHHHCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCH
VDEVRLALVGKIGENISIRRFVRFETANKLATYLHGSRIGVMVEYTGADEQVGKDVAMHV
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHH
AAMKPVSLSADEVPADLIEKERRVAEQKAAESGKPAEIVAKMVDGSVQKFLKEVSLLNQP
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
FVKNDKQTIEQMLKAANAAVQKFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA