| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
Click here to switch to the map view.
The map label for this gene is yheS [H]
Identifier: 161524414
GI number: 161524414
Start: 1363205
End: 1365136
Strand: Reverse
Name: yheS [H]
Synonym: Bmul_1241
Alternate gene names: 161524414
Gene position: 1365136-1363205 (Counterclockwise)
Preceding gene: 161524416
Following gene: 161524410
Centisome position: 39.59
GC content: 68.06
Gene sequence:
>1932_bases GTGATCCGTTTCAATCAGTTCAGCCTTGCGCGCGGCACCAAGCCGCTGTTCGACTCGGCCTCGTTCGTGCTCAATCCCGG CGAGAAAGCCGGCCTGATCGGCGCGAACGGCGCCGGCAAGTCGACGCTGTTCGCGGTCCTGCGCGGCGAGCTGCACGCCG ACGCCGGCGATTTCTCGATGCCGCCGTCGTGGCGGATCGCGCACGTGTCGCAGGAAACGCCCGCCGTCGATCGCTCCGCG CTCGACTACACGCTCGACGGCGACGCCGCGCTGCGCGAGATCGAGGCGCGCATCGCCGCTGCCTCGGCCGCCCACGACGG CGCGGCCGAAGCCGAAGCGCACGCCGCGTTCGCGGACGCCGACGGCTACACCGCGCCCGCGCGTGCGGAAGCGCTGCTGC TCGGCCTCGGCTTCACGCTCGCGCAAACGCGCGAGCCGGTCGCGAGCTTCTCGGGCGGCTGGCGGATGCGGCTGAATCTC GCGCAGGCGCTGATGTGCCGGTCCGATCTGCTGCTGCTCGACGAGCCGACCAACCACCTCGATCTCGACGCGATCGTCTG GCTCGAAGACTGGCTGCACCGCTACCCCGGCACGCTGATCGTGATCTCGCACGATCGCGAATTCCTCGACTCGATCTGCA ACGTCACGCTGCACCTCGAGAACCGGCAGATCAAGCGCTACGGCGGCAACTACTCGCAATTCGAAGTGTTGCGCGCTCAG CAGCTCGCGCTGCAGCAGAGCGCGTACGAGAAGCAGCAGAAGACGGTCGCGCACCTGCAAAGCTTCATCGACCGCTTCAA GGCGAAGGCGACCAAGGCACGCCAGGCGCAAAGCCGGATGAAGGCGCTCGAGAAGATGGAGCTGATCGCGCCCGCGCACG TCGCGTCGCCGTTCACGTTCGAGTTCCGCACGCCCGATGCGGCGCCGAACCCGATGATGGTGATGGAAGACGTGCGCTGC GGCTACCGTGCGGACGACGGCACCGAGATTCCGATCGTCGAGCGCGTCACGCTGTCGATCCAGAACGGGCAGCGCATCGG CCTGCTCGGCGCGAACGGCCAGGGCAAGTCGACGCTGATCAAGACGCTGGCCGGCACGCTTGCGCCGCTGTCCGGGCACG TGCGCGAAGGCAAGGGGCTGACGATCGGCTATTTCGCGCAGCACCAGCTCGAGACGCTGCGCGAGGACGATTCGCCGCTC GCGCATCTGGCGCGGCTCGCGCCCGACACGCGCGAGCAGGAACTGCGCGACTTCCTCGGCGGCTTCAATTTCTCGGGCGA CATGGCGACGAGCGCGGTCGGCCCGTTCTCGGGCGGCGAGAAAGCGCGCCTCGCGCTCGCGCTGATCATCTGGCAGAAGC CGAACCTGCTCCTGCTCGACGAACCGACGAACCACCTCGATCTCGAGACGCGTCATGCTCTGACGATGGCGCTCGCGCAG TTCGAAGGCACGCTGATTCTCGTCTCGCACGATCGTCACCTGCTGCGCGCGACGACCGACCAGTTCATGCTCGTCGCGAA GCACCGGCTGCAGCCGTTCGACGGCGATCTCGACGATTACCGCGACTGGCTGCTCCAGCATGCGGCCGAGCAGCGCGCGG CCGCGAAGGCGGAAGGTGCCGCCGCATCGGGCGCGGCGCCCGCCGTGAACCGCAAGGACCAGAAGCGTCAGGCGGCCGAG GAGCGGCAGCGTCTGTCGCAACTGAAGAAGCCGCTGCAGACGCGCATCACGAAGCTCGAGAAGGAAATGGAGACGCTGCA CGCGGAGAAGGCGCGCCTCGATGCGTTCGTCGCCGATCCGGCGAGCTACGAGGCCGCGCGCAAGGCCGAACTGACCGATG CGATTCGCAAGCTCGGCGACGTCAACGCGCGGCTCGAAGCGATCGAGGCGGACTGGCTCGCCGCGCAGGAAGAACTCGAG CAGATCGGCTGA
Upstream 100 bases:
>100_bases TGCTACGGCAAATCGGGCCGTCGCGACATTGGCCGGACGGCCGATGCGTGCGCGAACGGTGCGCAGTCTAGAATAGCGGT TTTGGCCAGTCATTTCCGCC
Downstream 100 bases:
>100_bases GCGCGGCACGCCGGCCGGCGGCCACGCAGCGCCGGTTCAGCGCCACTTCAGCGCCACTTCAGCGCCACTTCAGCGCCGGT TCAGCGCCAATTCAGCGCCA
Product: ABC transporter-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 643; Mature: 643
Protein sequence:
>643_residues MIRFNQFSLARGTKPLFDSASFVLNPGEKAGLIGANGAGKSTLFAVLRGELHADAGDFSMPPSWRIAHVSQETPAVDRSA LDYTLDGDAALREIEARIAAASAAHDGAAEAEAHAAFADADGYTAPARAEALLLGLGFTLAQTREPVASFSGGWRMRLNL AQALMCRSDLLLLDEPTNHLDLDAIVWLEDWLHRYPGTLIVISHDREFLDSICNVTLHLENRQIKRYGGNYSQFEVLRAQ QLALQQSAYEKQQKTVAHLQSFIDRFKAKATKARQAQSRMKALEKMELIAPAHVASPFTFEFRTPDAAPNPMMVMEDVRC GYRADDGTEIPIVERVTLSIQNGQRIGLLGANGQGKSTLIKTLAGTLAPLSGHVREGKGLTIGYFAQHQLETLREDDSPL AHLARLAPDTREQELRDFLGGFNFSGDMATSAVGPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKAEGAAASGAAPAVNRKDQKRQAAE ERQRLSQLKKPLQTRITKLEKEMETLHAEKARLDAFVADPASYEAARKAELTDAIRKLGDVNARLEAIEADWLAAQEELE QIG
Sequences:
>Translated_643_residues MIRFNQFSLARGTKPLFDSASFVLNPGEKAGLIGANGAGKSTLFAVLRGELHADAGDFSMPPSWRIAHVSQETPAVDRSA LDYTLDGDAALREIEARIAAASAAHDGAAEAEAHAAFADADGYTAPARAEALLLGLGFTLAQTREPVASFSGGWRMRLNL AQALMCRSDLLLLDEPTNHLDLDAIVWLEDWLHRYPGTLIVISHDREFLDSICNVTLHLENRQIKRYGGNYSQFEVLRAQ QLALQQSAYEKQQKTVAHLQSFIDRFKAKATKARQAQSRMKALEKMELIAPAHVASPFTFEFRTPDAAPNPMMVMEDVRC GYRADDGTEIPIVERVTLSIQNGQRIGLLGANGQGKSTLIKTLAGTLAPLSGHVREGKGLTIGYFAQHQLETLREDDSPL AHLARLAPDTREQELRDFLGGFNFSGDMATSAVGPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKAEGAAASGAAPAVNRKDQKRQAAE ERQRLSQLKKPLQTRITKLEKEMETLHAEKARLDAFVADPASYEAARKAELTDAIRKLGDVNARLEAIEADWLAAQEELE QIG >Mature_643_residues MIRFNQFSLARGTKPLFDSASFVLNPGEKAGLIGANGAGKSTLFAVLRGELHADAGDFSMPPSWRIAHVSQETPAVDRSA LDYTLDGDAALREIEARIAAASAAHDGAAEAEAHAAFADADGYTAPARAEALLLGLGFTLAQTREPVASFSGGWRMRLNL AQALMCRSDLLLLDEPTNHLDLDAIVWLEDWLHRYPGTLIVISHDREFLDSICNVTLHLENRQIKRYGGNYSQFEVLRAQ QLALQQSAYEKQQKTVAHLQSFIDRFKAKATKARQAQSRMKALEKMELIAPAHVASPFTFEFRTPDAAPNPMMVMEDVRC GYRADDGTEIPIVERVTLSIQNGQRIGLLGANGQGKSTLIKTLAGTLAPLSGHVREGKGLTIGYFAQHQLETLREDDSPL AHLARLAPDTREQELRDFLGGFNFSGDMATSAVGPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKAEGAAASGAAPAVNRKDQKRQAAE ERQRLSQLKKPLQTRITKLEKEMETLHAEKARLDAFVADPASYEAARKAELTDAIRKLGDVNARLEAIEADWLAAQEELE QIG
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=534, Percent_Identity=39.3258426966292, Blast_Score=359, Evalue=6e-99, Organism=Homo sapiens, GI27881506, Length=531, Percent_Identity=36.7231638418079, Blast_Score=322, Evalue=6e-88, Organism=Homo sapiens, GI10947137, Length=531, Percent_Identity=36.7231638418079, Blast_Score=322, Evalue=6e-88, Organism=Homo sapiens, GI69354671, Length=545, Percent_Identity=33.0275229357798, Blast_Score=261, Evalue=2e-69, Organism=Homo sapiens, GI10947135, Length=545, Percent_Identity=33.0275229357798, Blast_Score=260, Evalue=3e-69, Organism=Homo sapiens, GI150417984, Length=217, Percent_Identity=30.4147465437788, Blast_Score=68, Evalue=3e-11, Organism=Escherichia coli, GI1789751, Length=642, Percent_Identity=55.607476635514, Blast_Score=719, Evalue=0.0, Organism=Escherichia coli, GI1787041, Length=531, Percent_Identity=36.9114877589454, Blast_Score=339, Evalue=4e-94, Organism=Escherichia coli, GI1787182, Length=640, Percent_Identity=29.0625, Blast_Score=218, Evalue=7e-58, Organism=Escherichia coli, GI2367384, Length=530, Percent_Identity=30.188679245283, Blast_Score=215, Evalue=8e-57, Organism=Escherichia coli, GI1788165, Length=183, Percent_Identity=32.2404371584699, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87081782, Length=528, Percent_Identity=25.1893939393939, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI1790190, Length=233, Percent_Identity=23.6051502145923, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1787758, Length=182, Percent_Identity=26.3736263736264, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1787164, Length=195, Percent_Identity=31.7948717948718, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17553372, Length=532, Percent_Identity=36.4661654135338, Blast_Score=337, Evalue=1e-92, Organism=Caenorhabditis elegans, GI17555318, Length=509, Percent_Identity=35.7563850687623, Blast_Score=315, Evalue=5e-86, Organism=Caenorhabditis elegans, GI17559834, Length=566, Percent_Identity=32.1554770318021, Blast_Score=298, Evalue=6e-81, Organism=Caenorhabditis elegans, GI17565586, Length=215, Percent_Identity=26.5116279069767, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=556, Percent_Identity=33.9928057553957, Blast_Score=329, Evalue=1e-90, Organism=Saccharomyces cerevisiae, GI6320874, Length=537, Percent_Identity=31.8435754189944, Blast_Score=286, Evalue=6e-78, Organism=Saccharomyces cerevisiae, GI6324314, Length=392, Percent_Identity=29.5918367346939, Blast_Score=164, Evalue=5e-41, Organism=Saccharomyces cerevisiae, GI6325030, Length=391, Percent_Identity=30.4347826086957, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6323278, Length=385, Percent_Identity=28.5714285714286, Blast_Score=153, Evalue=7e-38, Organism=Drosophila melanogaster, GI24666836, Length=528, Percent_Identity=38.2575757575758, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24642252, Length=547, Percent_Identity=37.2943327239488, Blast_Score=342, Evalue=5e-94, Organism=Drosophila melanogaster, GI18859989, Length=547, Percent_Identity=37.2943327239488, Blast_Score=342, Evalue=5e-94, Organism=Drosophila melanogaster, GI24641342, Length=546, Percent_Identity=33.6996336996337, Blast_Score=310, Evalue=1e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 70748; Mature: 70748
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRFNQFSLARGTKPLFDSASFVLNPGEKAGLIGANGAGKSTLFAVLRGELHADAGDFSM CCEECCCHHCCCCCCCCCCCCEEECCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCC PPSWRIAHVSQETPAVDRSALDYTLDGDAALREIEARIAAASAAHDGAAEAEAHAAFADA CCCCEEEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECC DGYTAPARAEALLLGLGFTLAQTREPVASFSGGWRMRLNLAQALMCRSDLLLLDEPTNHL CCCCCCHHHHEEEEECCHHHHHHHCHHHHCCCCEEEEHHHHHHHHHHCCEEEEECCCCCC DLDAIVWLEDWLHRYPGTLIVISHDREFLDSICNVTLHLENRQIKRYGGNYSQFEVLRAQ CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEECCCHHHHHCCCHHHHHHHHHH QLALQQSAYEKQQKTVAHLQSFIDRFKAKATKARQAQSRMKALEKMELIAPAHVASPFTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEE EFRTPDAAPNPMMVMEDVRCGYRADDGTEIPIVERVTLSIQNGQRIGLLGANGQGKSTLI EEECCCCCCCCCEEEHHCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCHHHHH KTLAGTLAPLSGHVREGKGLTIGYFAQHQLETLREDDSPLAHLARLAPDTREQELRDFLG HHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHC GFNFSGDMATSAVGPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ CCCCCCCCHHHCCCCCCCCCHHEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHH FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKAEGA HCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC AASGAAPAVNRKDQKRQAAEERQRLSQLKKPLQTRITKLEKEMETLHAEKARLDAFVADP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ASYEAARKAELTDAIRKLGDVNARLEAIEADWLAAQEELEQIG CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIRFNQFSLARGTKPLFDSASFVLNPGEKAGLIGANGAGKSTLFAVLRGELHADAGDFSM CCEECCCHHCCCCCCCCCCCCEEECCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCC PPSWRIAHVSQETPAVDRSALDYTLDGDAALREIEARIAAASAAHDGAAEAEAHAAFADA CCCCEEEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECC DGYTAPARAEALLLGLGFTLAQTREPVASFSGGWRMRLNLAQALMCRSDLLLLDEPTNHL CCCCCCHHHHEEEEECCHHHHHHHCHHHHCCCCEEEEHHHHHHHHHHCCEEEEECCCCCC DLDAIVWLEDWLHRYPGTLIVISHDREFLDSICNVTLHLENRQIKRYGGNYSQFEVLRAQ CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEECCCHHHHHCCCHHHHHHHHHH QLALQQSAYEKQQKTVAHLQSFIDRFKAKATKARQAQSRMKALEKMELIAPAHVASPFTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEE EFRTPDAAPNPMMVMEDVRCGYRADDGTEIPIVERVTLSIQNGQRIGLLGANGQGKSTLI EEECCCCCCCCCEEEHHCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCHHHHH KTLAGTLAPLSGHVREGKGLTIGYFAQHQLETLREDDSPLAHLARLAPDTREQELRDFLG HHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHC GFNFSGDMATSAVGPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ CCCCCCCCHHHCCCCCCCCCHHEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHH FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKAEGA HCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC AASGAAPAVNRKDQKRQAAEERQRLSQLKKPLQTRITKLEKEMETLHAEKARLDAFVADP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ASYEAARKAELTDAIRKLGDVNARLEAIEADWLAAQEELEQIG CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]