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The map label for this gene is yccM [C]

Identifier: 161524247

GI number: 161524247

Start: 1170784

End: 1172181

Strand: Direct

Name: yccM [C]

Synonym: Bmul_1071

Alternate gene names: 161524247

Gene position: 1170784-1172181 (Clockwise)

Preceding gene: 161524246

Following gene: 161524251

Centisome position: 33.95

GC content: 66.88

Gene sequence:

>1398_bases
ATGAGCGTCGTCGCAGCAGCAAAGCCGGGCCGGCTCGCGCAGGCCGGCCACTGGATGCAGCGCCACGGGGCACTGATTCG
CGGCATCCAGTGGGTCGTCGTCGCCGTCTATGCGTTCCTGATCATCGTGCCGGCGATCACGCCGCTGCCGGACGATTCCG
CGCATCTCTGGAGCAACCTGACGCTCGCTGCGGAATTCGTGTTCTGGGGCATCTGGTGGCCGTTCGTGCTGCTGTCGATG
GTGATGCTCGGCCGCGTCTGGTGCGGCGTACTGTGTCCCGAAGGCGCGCTGGCCGAGTATGCAAGCCGCTTCGGCCGCGG
GCGCGCCATCCCGCGCTGGATGCGGTGGGGCGGCTGGCCGTTCGTCGCGTTCGGGATCACGACGATCTACGGCCAGATGG
TCAGCGTGTATCAGTATCCGCTTGCCGTGCTGCTCGTGCTCGGCGGCTCGACGGCCGCCGCCATCGTGATCGGGCTGCTG
TACGGTCGCGAGAAGCGCGTGTGGTGCAAGTACCTGTGCCCCGTCAACGGCGTGTTCGGGCTGCTCGCGCGGCTCGCGCC
GATGCGCTACAAGGTCGACGAGGAAGCGTGGCGCCGCTCGTACAAGAACGGCGAGCATGGGCATCGCGTGATTCCGATCA
ACTGCGCGCCGCTCGTGCCGCTGCGCAACATGAAGGGCGCCGCCGCGTGTCACATGTGCGGCCGCTGCAGCGGTCATCGC
GACGCGATCGCGTTGTCGTGGCGCTCGCCGTCCGATGAAGTCGTCAATCTCGGCGCGCAGCAGGCGAATCCCTGGGATAC
CGCGCTGATCCTCTACGGTCTGCTTGGCGTTGCGATCGGTGCGTTCCACTGGACGGTCAGTCCGTGGTTCGTGCAGATCA
AGCAGTGGCTTGCCGGTTGGCTGATCGACCACGACATCACGTGGCCGCTCGAGACCAACGCGCCGTGGTTCCTGCTGACG
CACTATCCGGACCGCAACGACGTGTTCTCGTGGCTCGACGGCGGGCTGATCGTCAGCTACATCGTCGGCACGGGCCTCGT
GTACGGTACGGCGCTGCTCGTGCTGCTGGCCGGCGCGACGCTGATGCTCGGCCGCTTCGATCGCGTACGGCTCCATCATC
TCGCTCAGGCATTGATTCCGATCGCGGGCGCGGGCGTATTTCTCGGGTTGTCGACGACGACGTTGTCGCTGCTGCGCGCC
GAACATGTGCCACTCGGCTGGGCGGCCGATGTGCGGATTGCGATTCTGGTCGGCGCAAACGCGTGGAGCGCCTGGCTCGC
ATGGAAGGTGACGGGCCGCTACGCGATGTGGCCGCGCCGGCTCGCGGCTTTCGCGTGGTTTGCCGCCGCGCTGGCGGTGA
TCGATAGCGCGTGGTGGCTGATGTTCTGGGGTTTCTGA

Upstream 100 bases:

>100_bases
CGCTGACGAACCTGATCGCCTATGGGGTGTACTGGGCGGTCGTGTGGCTGTTGATGAAGCGTGCGAGCCGTCGCCCGGCC
GTCGCAGCGGGTCGCGCGGC

Downstream 100 bases:

>100_bases
GCGCCTGCGCGCATCGCGTCGGCCACAGCGGCCGATCGCCGAACGACGTCGGTCTGCCTTCATGGATTGCATTGCCGCGC
GAGCGCGAGCGAATGGAGGC

Product: polyferredoxin-like protein

Products: NA

Alternate protein names: Nitrogen Fixation Protein VnfA; Regulatory Protein; Polyferredoxin; Polyferredoxin-Like Protein; Polyferredoxin-Like; Nitrogen Regulatory Protein; Ferredoxin; Polyferredoxin Protein; Sigma-54 Interaction Domain Family

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MSVVAAAKPGRLAQAGHWMQRHGALIRGIQWVVVAVYAFLIIVPAITPLPDDSAHLWSNLTLAAEFVFWGIWWPFVLLSM
VMLGRVWCGVLCPEGALAEYASRFGRGRAIPRWMRWGGWPFVAFGITTIYGQMVSVYQYPLAVLLVLGGSTAAAIVIGLL
YGREKRVWCKYLCPVNGVFGLLARLAPMRYKVDEEAWRRSYKNGEHGHRVIPINCAPLVPLRNMKGAAACHMCGRCSGHR
DAIALSWRSPSDEVVNLGAQQANPWDTALILYGLLGVAIGAFHWTVSPWFVQIKQWLAGWLIDHDITWPLETNAPWFLLT
HYPDRNDVFSWLDGGLIVSYIVGTGLVYGTALLVLLAGATLMLGRFDRVRLHHLAQALIPIAGAGVFLGLSTTTLSLLRA
EHVPLGWAADVRIAILVGANAWSAWLAWKVTGRYAMWPRRLAAFAWFAAALAVIDSAWWLMFWGF

Sequences:

>Translated_465_residues
MSVVAAAKPGRLAQAGHWMQRHGALIRGIQWVVVAVYAFLIIVPAITPLPDDSAHLWSNLTLAAEFVFWGIWWPFVLLSM
VMLGRVWCGVLCPEGALAEYASRFGRGRAIPRWMRWGGWPFVAFGITTIYGQMVSVYQYPLAVLLVLGGSTAAAIVIGLL
YGREKRVWCKYLCPVNGVFGLLARLAPMRYKVDEEAWRRSYKNGEHGHRVIPINCAPLVPLRNMKGAAACHMCGRCSGHR
DAIALSWRSPSDEVVNLGAQQANPWDTALILYGLLGVAIGAFHWTVSPWFVQIKQWLAGWLIDHDITWPLETNAPWFLLT
HYPDRNDVFSWLDGGLIVSYIVGTGLVYGTALLVLLAGATLMLGRFDRVRLHHLAQALIPIAGAGVFLGLSTTTLSLLRA
EHVPLGWAADVRIAILVGANAWSAWLAWKVTGRYAMWPRRLAAFAWFAAALAVIDSAWWLMFWGF
>Mature_464_residues
SVVAAAKPGRLAQAGHWMQRHGALIRGIQWVVVAVYAFLIIVPAITPLPDDSAHLWSNLTLAAEFVFWGIWWPFVLLSMV
MLGRVWCGVLCPEGALAEYASRFGRGRAIPRWMRWGGWPFVAFGITTIYGQMVSVYQYPLAVLLVLGGSTAAAIVIGLLY
GREKRVWCKYLCPVNGVFGLLARLAPMRYKVDEEAWRRSYKNGEHGHRVIPINCAPLVPLRNMKGAAACHMCGRCSGHRD
AIALSWRSPSDEVVNLGAQQANPWDTALILYGLLGVAIGAFHWTVSPWFVQIKQWLAGWLIDHDITWPLETNAPWFLLTH
YPDRNDVFSWLDGGLIVSYIVGTGLVYGTALLVLLAGATLMLGRFDRVRLHHLAQALIPIAGAGVFLGLSTTTLSLLRAE
HVPLGWAADVRIAILVGANAWSAWLAWKVTGRYAMWPRRLAAFAWFAAALAVIDSAWWLMFWGF

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51623; Mature: 51492

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVVAAAKPGRLAQAGHWMQRHGALIRGIQWVVVAVYAFLIIVPAITPLPDDSAHLWSNL
CCEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
TLAAEFVFWGIWWPFVLLSMVMLGRVWCGVLCPEGALAEYASRFGRGRAIPRWMRWGGWP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHCCCCH
FVAFGITTIYGQMVSVYQYPLAVLLVLGGSTAAAIVIGLLYGREKRVWCKYLCPVNGVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHEECCCCHHHHH
LLARLAPMRYKVDEEAWRRSYKNGEHGHRVIPINCAPLVPLRNMKGAAACHMCGRCSGHR
HHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCC
DAIALSWRSPSDEVVNLGAQQANPWDTALILYGLLGVAIGAFHWTVSPWFVQIKQWLAGW
CEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LIDHDITWPLETNAPWFLLTHYPDRNDVFSWLDGGLIVSYIVGTGLVYGTALLVLLAGAT
HCCCCCCCCEECCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LMLGRFDRVRLHHLAQALIPIAGAGVFLGLSTTTLSLLRAEHVPLGWAADVRIAILVGAN
HHHHCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCEECCEEEEEEECCC
AWSAWLAWKVTGRYAMWPRRLAAFAWFAAALAVIDSAWWLMFWGF
CHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
SVVAAAKPGRLAQAGHWMQRHGALIRGIQWVVVAVYAFLIIVPAITPLPDDSAHLWSNL
CEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
TLAAEFVFWGIWWPFVLLSMVMLGRVWCGVLCPEGALAEYASRFGRGRAIPRWMRWGGWP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHCCCCH
FVAFGITTIYGQMVSVYQYPLAVLLVLGGSTAAAIVIGLLYGREKRVWCKYLCPVNGVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHEECCCCHHHHH
LLARLAPMRYKVDEEAWRRSYKNGEHGHRVIPINCAPLVPLRNMKGAAACHMCGRCSGHR
HHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCC
DAIALSWRSPSDEVVNLGAQQANPWDTALILYGLLGVAIGAFHWTVSPWFVQIKQWLAGW
CEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LIDHDITWPLETNAPWFLLTHYPDRNDVFSWLDGGLIVSYIVGTGLVYGTALLVLLAGAT
HCCCCCCCCEECCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LMLGRFDRVRLHHLAQALIPIAGAGVFLGLSTTTLSLLRAEHVPLGWAADVRIAILVGAN
HHHHCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCEECCEEEEEEECCC
AWSAWLAWKVTGRYAMWPRRLAAFAWFAAALAVIDSAWWLMFWGF
CHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA