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The map label for this gene is ltrA [H]

Identifier: 161524251

GI number: 161524251

Start: 1174443

End: 1175417

Strand: Direct

Name: ltrA [H]

Synonym: Bmul_1075

Alternate gene names: 161524251

Gene position: 1174443-1175417 (Clockwise)

Preceding gene: 161524247

Following gene: 161524261

Centisome position: 34.06

GC content: 66.46

Gene sequence:

>975_bases
ATGAACATCGATGCACATAACCTGAACGACCTGATGTACTTTTCGCAGGTCGTCGAGCACGGCGGTTTTTCCGCGGCGGA
GCGCGTCCTCGGCATCTCGAAATCGCGGCTGTCGCGGCGCCTGACGGAACTCGAGGGCGCCCTCGGCGTGCGGCTGCTGC
AGCGTTCGACGCGCAAGCTGGCGCTCACCGAGGCGGGCGAGCTGTTCTACCAGCACTGCCAGGCGATGCTGGCCGAGGCG
CAGGCGGCGATGAACGCGGTGCAGCAGCTGCGTGCGTCGCCGCGCGGGTCCGTGCGCGTCAGCGTGCCGGTCACGCTGTC
GCAGACGATGCTGTCGCGGATCCTGCCGGAATTCCTGCATCGCTATCCCGAAGTGAAGGTGCACATCCGTGTGACGAATC
GCGTGATCGACCTGTTCGAGGATTCGATCGACGTCGCGCTGCGCGTTCGCTCGGAGCCGCCGCAGAACGCGAACATCGTC
GTGCGGCCGCTGTGGCGTACCGAGCAGATGCTGGTCGGTGCGCCGAGCCTGTTGAGCCAGAATGCACCGCCGCTCGTGCC
GGAAGATCTCGCGCATTTCGAAACGCTCGATACGCCGAGCGTCGACGGGCGCCATGTGTTCAACCTGATCGCGCCGGACG
GCACGCGTCACGTGCACGAACACGATCCGCGCCTCGTGACCGCCGACTTGATGACGATTCGCGAGGCGGTGCTCGACGGT
CTCGGCATCGCGGCGCTGCCGGAGATGATGTACGGCAATGCGTTGCGCGCCGGCCAGTTGTCGCCGGTGATGCCGGGTTG
GACGTTGCCGGTCCCGCAGCTGTACGCGGTGTTCGTATCGCGGCAGGGGATGCCGCCCGCGGTGCGTGCATTCGTCGACT
ACCTGGTGGAGAAGCTCGATCACGGCGAATACAAGCAGCCGAGCTGCCCCGAGCGCGCGAAGAAGGATGCGGCCGCCGAC
GTTGCGGCGAGCTGA

Upstream 100 bases:

>100_bases
GAATAGCGTTATTTTTGAAACACTACGCTATTATATTGACCGATTTGCCTGGGAATTTGCGGTGACCCGCAATGGATTGT
TCTGAAATTGGAACGATGAC

Downstream 100 bases:

>100_bases
ACGTCGCACGCGCAAGGCGGCGGATTTGTTTTGTCATTGAAGCGTCGCCGGCAATCGCAAGTTTCAATCGACAGGCACTT
GAATGCCGATGCGGGCAGGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MNIDAHNLNDLMYFSQVVEHGGFSAAERVLGISKSRLSRRLTELEGALGVRLLQRSTRKLALTEAGELFYQHCQAMLAEA
QAAMNAVQQLRASPRGSVRVSVPVTLSQTMLSRILPEFLHRYPEVKVHIRVTNRVIDLFEDSIDVALRVRSEPPQNANIV
VRPLWRTEQMLVGAPSLLSQNAPPLVPEDLAHFETLDTPSVDGRHVFNLIAPDGTRHVHEHDPRLVTADLMTIREAVLDG
LGIAALPEMMYGNALRAGQLSPVMPGWTLPVPQLYAVFVSRQGMPPAVRAFVDYLVEKLDHGEYKQPSCPERAKKDAAAD
VAAS

Sequences:

>Translated_324_residues
MNIDAHNLNDLMYFSQVVEHGGFSAAERVLGISKSRLSRRLTELEGALGVRLLQRSTRKLALTEAGELFYQHCQAMLAEA
QAAMNAVQQLRASPRGSVRVSVPVTLSQTMLSRILPEFLHRYPEVKVHIRVTNRVIDLFEDSIDVALRVRSEPPQNANIV
VRPLWRTEQMLVGAPSLLSQNAPPLVPEDLAHFETLDTPSVDGRHVFNLIAPDGTRHVHEHDPRLVTADLMTIREAVLDG
LGIAALPEMMYGNALRAGQLSPVMPGWTLPVPQLYAVFVSRQGMPPAVRAFVDYLVEKLDHGEYKQPSCPERAKKDAAAD
VAAS
>Mature_324_residues
MNIDAHNLNDLMYFSQVVEHGGFSAAERVLGISKSRLSRRLTELEGALGVRLLQRSTRKLALTEAGELFYQHCQAMLAEA
QAAMNAVQQLRASPRGSVRVSVPVTLSQTMLSRILPEFLHRYPEVKVHIRVTNRVIDLFEDSIDVALRVRSEPPQNANIV
VRPLWRTEQMLVGAPSLLSQNAPPLVPEDLAHFETLDTPSVDGRHVFNLIAPDGTRHVHEHDPRLVTADLMTIREAVLDG
LGIAALPEMMYGNALRAGQLSPVMPGWTLPVPQLYAVFVSRQGMPPAVRAFVDYLVEKLDHGEYKQPSCPERAKKDAAAD
VAAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789639, Length=294, Percent_Identity=32.9931972789116, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1786401, Length=289, Percent_Identity=31.4878892733564, Blast_Score=144, Evalue=7e-36,
Organism=Escherichia coli, GI1789440, Length=287, Percent_Identity=26.4808362369338, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI87081978, Length=289, Percent_Identity=27.681660899654, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI145693193, Length=292, Percent_Identity=28.0821917808219, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI1787128, Length=290, Percent_Identity=25.1724137931034, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1787589, Length=297, Percent_Identity=27.6094276094276, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788481, Length=294, Percent_Identity=25.5102040816327, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI157672245, Length=138, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1789173, Length=292, Percent_Identity=25, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI1787601, Length=172, Percent_Identity=24.4186046511628, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI1788297, Length=277, Percent_Identity=24.9097472924188, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790011, Length=303, Percent_Identity=21.1221122112211, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788748, Length=121, Percent_Identity=31.404958677686, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI145693105, Length=124, Percent_Identity=28.2258064516129, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1788887, Length=306, Percent_Identity=25.8169934640523, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1789506, Length=237, Percent_Identity=21.0970464135021, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35854; Mature: 35854

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDAHNLNDLMYFSQVVEHGGFSAAERVLGISKSRLSRRLTELEGALGVRLLQRSTRKL
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALTEAGELFYQHCQAMLAEAQAAMNAVQQLRASPRGSVRVSVPVTLSQTMLSRILPEFLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHH
RYPEVKVHIRVTNRVIDLFEDSIDVALRVRSEPPQNANIVVRPLWRTEQMLVGAPSLLSQ
HCCCEEEEEEEHHHHHHHHHHCHHEEEEECCCCCCCCCEEEEECCCCHHHHHCCHHHHCC
NAPPLVPEDLAHFETLDTPSVDGRHVFNLIAPDGTRHVHEHDPRLVTADLMTIREAVLDG
CCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHC
LGIAALPEMMYGNALRAGQLSPVMPGWTLPVPQLYAVFVSRQGMPPAVRAFVDYLVEKLD
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
HGEYKQPSCPERAKKDAAADVAAS
CCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNIDAHNLNDLMYFSQVVEHGGFSAAERVLGISKSRLSRRLTELEGALGVRLLQRSTRKL
CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALTEAGELFYQHCQAMLAEAQAAMNAVQQLRASPRGSVRVSVPVTLSQTMLSRILPEFLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHH
RYPEVKVHIRVTNRVIDLFEDSIDVALRVRSEPPQNANIVVRPLWRTEQMLVGAPSLLSQ
HCCCEEEEEEEHHHHHHHHHHCHHEEEEECCCCCCCCCEEEEECCCCHHHHHCCHHHHCC
NAPPLVPEDLAHFETLDTPSVDGRHVFNLIAPDGTRHVHEHDPRLVTADLMTIREAVLDG
CCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHC
LGIAALPEMMYGNALRAGQLSPVMPGWTLPVPQLYAVFVSRQGMPPAVRAFVDYLVEKLD
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
HGEYKQPSCPERAKKDAAADVAAS
CCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8748036 [H]