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The map label for this gene is acdA [H]

Identifier: 161524221

GI number: 161524221

Start: 1141306

End: 1142502

Strand: Direct

Name: acdA [H]

Synonym: Bmul_1045

Alternate gene names: 161524221

Gene position: 1141306-1142502 (Clockwise)

Preceding gene: 161524220

Following gene: 161524222

Centisome position: 33.1

GC content: 64.83

Gene sequence:

>1197_bases
ATGGATCTGGATTATTCCCCCGCCGACGACGCGTTCCGCGCCGACATCCGCGCGTGGCTCGAGGCGAACCTGCCTCGAAC
GCTGCGCGCGAAGGTTCTCGATCACAAACGACTCGATCGCGAAGACTACGCGAGCTGGCACCGCATTCTCGGCCGGCGCG
GCTGGTCTGCGCCCGCATGGCCGGCCGAATACGGCGGCCCGGGCTGGAACGCGACGCAGCGACACATCTGGGACGAAGAG
TGCGCGCGCATCGGGGCGCCGACCGTGCTGCCGTTCGGCGTATCGATGGTCGCACCCGTGCTGATGAAATACGGCAGCGA
GGCACAGAAGCGCCATTACCTGCCGCGCATCCTCGACGGCACCGACTGGTGGTGCCAGGGCTACTCGGAGCCGGGTTCCG
GGTCGGACCTCGCGTCGCTGCGCACGCGCGCCGAACGTCGCGGCGATCATTACGTCGTCAACGGCCAGAAGACGTGGACG
ACGCTCGGCCAGCATGCGGACATGATGTTCTGCCTCGTGCGCACCGATCCGTCCGCGAAAAAGCAGGAAGGCATTTCGTT
CCTGCTGATCGACATGAAGACGCCCGGCATCACGGTGCGGCCGATCATCACGCTCGACGAAGATCATGAAGTCAACGAAG
TGTTCTTCGAGGACGTGAAGGTGCCGGTCGAGAATCTCGTCGGCGACGAGAACCGCGGCTGGACTTACGCGAAATACCTG
CTCGGCCACGAGCGCACGGGGATCGCGCGCGTCGGCGCATCGAAGCGCGAACTCGCATTCCTCAAGCGCATCGCCTCGAA
CCAGCGCAAGAACGGCAAGCCGCTGCTCGCCGATCCGGTGTTCGCCGCAAAGGTCGCGGCGCTCGAAGTCGAGCTGATGG
CGCTCGAGGTCACGGTGCTGCGCGTCGTGAGCCGCGAGACGAGCGGCAAGGGGCCGGGGCCGGAAGCGTCGATGCTGAAG
ATCAAGGGCACCGAGGTGCAGCAGGCGCTCACCGAGCTGATGTTCGAAGCGATCGGGCCGCTTGCCGCGCCGTTCGACGT
GCCGTTTCTCGAAGGCGAGCGCGAGCACAGCATCGCGGATGACGATGACGCGGCGCCGCTTGCCGCGTACTACTTCAATT
ACCGGAAGACGTCGATCTACGGCGGCTCGAACGAAATTCAGAAAAACATCATCGCGCAGATGATTCTCGGCCTCTGA

Upstream 100 bases:

>100_bases
GGCCCGGTCCGCGCGTATGCGCCGCATCGGGTGGATCGCGAAGCATGGGCCAGTGCAGTACCGCCTCAGGTACGCGCGCT
GGCGACAGGAGACACTGCGC

Downstream 100 bases:

>100_bases
GCCGAGCTCACGCGATCGGAGACAACGATGGATTTCACCTTTACCGATGAGCAGCAGCAGTTCGCCGAGGCGCTTCGCCG
TTATCTCGGCGAGCAGTACG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MDLDYSPADDAFRADIRAWLEANLPRTLRAKVLDHKRLDREDYASWHRILGRRGWSAPAWPAEYGGPGWNATQRHIWDEE
CARIGAPTVLPFGVSMVAPVLMKYGSEAQKRHYLPRILDGTDWWCQGYSEPGSGSDLASLRTRAERRGDHYVVNGQKTWT
TLGQHADMMFCLVRTDPSAKKQEGISFLLIDMKTPGITVRPIITLDEDHEVNEVFFEDVKVPVENLVGDENRGWTYAKYL
LGHERTGIARVGASKRELAFLKRIASNQRKNGKPLLADPVFAAKVAALEVELMALEVTVLRVVSRETSGKGPGPEASMLK
IKGTEVQQALTELMFEAIGPLAAPFDVPFLEGEREHSIADDDDAAPLAAYYFNYRKTSIYGGSNEIQKNIIAQMILGL

Sequences:

>Translated_398_residues
MDLDYSPADDAFRADIRAWLEANLPRTLRAKVLDHKRLDREDYASWHRILGRRGWSAPAWPAEYGGPGWNATQRHIWDEE
CARIGAPTVLPFGVSMVAPVLMKYGSEAQKRHYLPRILDGTDWWCQGYSEPGSGSDLASLRTRAERRGDHYVVNGQKTWT
TLGQHADMMFCLVRTDPSAKKQEGISFLLIDMKTPGITVRPIITLDEDHEVNEVFFEDVKVPVENLVGDENRGWTYAKYL
LGHERTGIARVGASKRELAFLKRIASNQRKNGKPLLADPVFAAKVAALEVELMALEVTVLRVVSRETSGKGPGPEASMLK
IKGTEVQQALTELMFEAIGPLAAPFDVPFLEGEREHSIADDDDAAPLAAYYFNYRKTSIYGGSNEIQKNIIAQMILGL
>Mature_398_residues
MDLDYSPADDAFRADIRAWLEANLPRTLRAKVLDHKRLDREDYASWHRILGRRGWSAPAWPAEYGGPGWNATQRHIWDEE
CARIGAPTVLPFGVSMVAPVLMKYGSEAQKRHYLPRILDGTDWWCQGYSEPGSGSDLASLRTRAERRGDHYVVNGQKTWT
TLGQHADMMFCLVRTDPSAKKQEGISFLLIDMKTPGITVRPIITLDEDHEVNEVFFEDVKVPVENLVGDENRGWTYAKYL
LGHERTGIARVGASKRELAFLKRIASNQRKNGKPLLADPVFAAKVAALEVELMALEVTVLRVVSRETSGKGPGPEASMLK
IKGTEVQQALTELMFEAIGPLAAPFDVPFLEGEREHSIADDDDAAPLAAYYFNYRKTSIYGGSNEIQKNIIAQMILGL

Specific function: Involved in the degradation of long-chain fatty acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=372, Percent_Identity=27.9569892473118, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI4501859, Length=340, Percent_Identity=28.2352941176471, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI4501857, Length=401, Percent_Identity=25.1870324189526, Blast_Score=118, Evalue=9e-27,
Organism=Homo sapiens, GI226958414, Length=203, Percent_Identity=32.0197044334975, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI226958412, Length=241, Percent_Identity=29.8755186721992, Blast_Score=115, Evalue=7e-26,
Organism=Homo sapiens, GI4557231, Length=341, Percent_Identity=26.099706744868, Blast_Score=105, Evalue=7e-23,
Organism=Homo sapiens, GI187960098, Length=341, Percent_Identity=26.099706744868, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI211971008, Length=321, Percent_Identity=28.6604361370716, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI48976061, Length=321, Percent_Identity=28.6604361370716, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI21361497, Length=380, Percent_Identity=27.3684210526316, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI7656849, Length=349, Percent_Identity=24.3553008595989, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI4557235, Length=294, Percent_Identity=28.2312925170068, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI76496475, Length=295, Percent_Identity=28.135593220339, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI38505218, Length=286, Percent_Identity=27.6223776223776, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI4503943, Length=239, Percent_Identity=27.6150627615063, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI7669494, Length=239, Percent_Identity=27.6150627615063, Blast_Score=75, Evalue=9e-14,
Organism=Escherichia coli, GI87081958, Length=401, Percent_Identity=23.1920199501247, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1786223, Length=330, Percent_Identity=23.6363636363636, Blast_Score=79, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17538396, Length=252, Percent_Identity=31.3492063492063, Blast_Score=118, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI17508101, Length=346, Percent_Identity=27.4566473988439, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17569725, Length=206, Percent_Identity=33.495145631068, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17506239, Length=351, Percent_Identity=25.9259259259259, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17570075, Length=203, Percent_Identity=31.5270935960591, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17534899, Length=222, Percent_Identity=31.0810810810811, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17551932, Length=212, Percent_Identity=30.188679245283, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71985184, Length=212, Percent_Identity=34.9056603773585, Blast_Score=98, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI32563615, Length=198, Percent_Identity=32.3232323232323, Blast_Score=98, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI71985192, Length=212, Percent_Identity=34.9056603773585, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17505929, Length=299, Percent_Identity=26.7558528428094, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71990804, Length=271, Percent_Identity=26.1992619926199, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17533517, Length=257, Percent_Identity=28.0155642023346, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17534353, Length=266, Percent_Identity=25.9398496240602, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71982178, Length=194, Percent_Identity=26.2886597938144, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17562446, Length=350, Percent_Identity=23.4285714285714, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356377, Length=372, Percent_Identity=27.1505376344086, Blast_Score=117, Evalue=9e-27,
Organism=Drosophila melanogaster, GI21355753, Length=299, Percent_Identity=30.4347826086957, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI281363737, Length=283, Percent_Identity=29.3286219081272, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI24646207, Length=365, Percent_Identity=26.8493150684932, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24666513, Length=346, Percent_Identity=26.0115606936416, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24660351, Length=254, Percent_Identity=30.7086614173228, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI19920834, Length=401, Percent_Identity=24.6882793017456, Blast_Score=78, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44498; Mature: 44498

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLDYSPADDAFRADIRAWLEANLPRTLRAKVLDHKRLDREDYASWHRILGRRGWSAPAW
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC
PAEYGGPGWNATQRHIWDEECARIGAPTVLPFGVSMVAPVLMKYGSEAQKRHYLPRILDG
CHHCCCCCCCCHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHCCC
TDWWCQGYSEPGSGSDLASLRTRAERRGDHYVVNGQKTWTTLGQHADMMFCLVRTDPSAK
CCHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCEEEEEEECCCCCH
KQEGISFLLIDMKTPGITVRPIITLDEDHEVNEVFFEDVKVPVENLVGDENRGWTYAKYL
HHCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCHHHHH
LGHERTGIARVGASKRELAFLKRIASNQRKNGKPLLADPVFAAKVAALEVELMALEVTVL
HCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHH
RVVSRETSGKGPGPEASMLKIKGTEVQQALTELMFEAIGPLAAPFDVPFLEGEREHSIAD
HHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
DDDAAPLAAYYFNYRKTSIYGGSNEIQKNIIAQMILGL
CCCCCHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLDYSPADDAFRADIRAWLEANLPRTLRAKVLDHKRLDREDYASWHRILGRRGWSAPAW
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC
PAEYGGPGWNATQRHIWDEECARIGAPTVLPFGVSMVAPVLMKYGSEAQKRHYLPRILDG
CHHCCCCCCCCHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHCCC
TDWWCQGYSEPGSGSDLASLRTRAERRGDHYVVNGQKTWTTLGQHADMMFCLVRTDPSAK
CCHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCEEEEEEECCCCCH
KQEGISFLLIDMKTPGITVRPIITLDEDHEVNEVFFEDVKVPVENLVGDENRGWTYAKYL
HHCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCCHHHHH
LGHERTGIARVGASKRELAFLKRIASNQRKNGKPLLADPVFAAKVAALEVELMALEVTVL
HCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHH
RVVSRETSGKGPGPEASMLKIKGTEVQQALTELMFEAIGPLAAPFDVPFLEGEREHSIAD
HHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
DDDAAPLAAYYFNYRKTSIYGGSNEIQKNIIAQMILGL
CCCCCHHHHHHHHCEEEEEECCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]