Click here to switch to the map view.

The map label for this gene is yhdE [C]

Identifier: 161524154

GI number: 161524154

Start: 1073499

End: 1074131

Strand: Reverse

Name: yhdE [C]

Synonym: Bmul_0978

Alternate gene names: 161524154

Gene position: 1074131-1073499 (Counterclockwise)

Preceding gene: 161524155

Following gene: 161524153

Centisome position: 31.15

GC content: 72.35

Gene sequence:

>633_bases
ATGCCGTCCAGCCTGTCCCCCGCCCTTTTCCCGACCCTTTACCTCGCTTCGCAAAGCCCACGCCGCCAGGAGCTGCTGCA
GCAGATCGGCGTGCGTTTCGAACTGCTGCTGCCGCGCGCCGACGAGGACGCCGAGGCGCTCGAAGCCGAGCTGCCCGGCG
AAGCCGCCGACACGTACGTGCGGCGCGTGACCGTCGCGAAAGCCGAGGCCGCGCGTGCGCGGCTCGTGGCGAGCGGCAAG
CCGGCCGCGCCGGTGCTCGTCGCCGACACGACGGTGACGATCGACGGCGCGATTCTCGGCAAGCCGGCCGACGCCGACGA
TGCGCTCGCGATGCTGACGCGTCTCGCGGGCCGCGCGCACGAGGTGCTGACCGCCGTCGCCGTGATCGGCGCGGACGGCG
CGTTGCTGCCGCCTGCGCTGTCGCGCTCGTCGGTGCGCTTCGCGGCCGCGCCGCGCGATGCGCTGATGCGCTACGTCGAC
ACCGGCGAACCGTTCGGCAAGGCCGGCGCATACGCGATCCAGGGCCGCGCGGCCGAGTTCGTCGAGCGAATCGACGGTTC
CCATTCGGGTATCATGGGTCTGCCCCTTTTTGAGACAGCCGCGCTGCTGCGCGCCGCGCGCGTCGCCTTCTGA

Upstream 100 bases:

>100_bases
TTACCGGGCGTGGAGCATCACGCAGAATCACCCTTATCACCGCGCATGACGCGTCGTCCTCGCGACGCGCGGCCCGCGCG
CTCAACGAGATAACGACACC

Downstream 100 bases:

>100_bases
ACCGCACCATGAACGAAGAAATCCTGATCAACCTCACGCCGCAGGAAACGCGCGTCGCACTCGTGCAGCAAGGCGCGGTG
CAGGAACTTCACGTCGAGCG

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MPSSLSPALFPTLYLASQSPRRQELLQQIGVRFELLLPRADEDAEALEAELPGEAADTYVRRVTVAKAEAARARLVASGK
PAAPVLVADTTVTIDGAILGKPADADDALAMLTRLAGRAHEVLTAVAVIGADGALLPPALSRSSVRFAAAPRDALMRYVD
TGEPFGKAGAYAIQGRAAEFVERIDGSHSGIMGLPLFETAALLRAARVAF

Sequences:

>Translated_210_residues
MPSSLSPALFPTLYLASQSPRRQELLQQIGVRFELLLPRADEDAEALEAELPGEAADTYVRRVTVAKAEAARARLVASGK
PAAPVLVADTTVTIDGAILGKPADADDALAMLTRLAGRAHEVLTAVAVIGADGALLPPALSRSSVRFAAAPRDALMRYVD
TGEPFGKAGAYAIQGRAAEFVERIDGSHSGIMGLPLFETAALLRAARVAF
>Mature_209_residues
PSSLSPALFPTLYLASQSPRRQELLQQIGVRFELLLPRADEDAEALEAELPGEAADTYVRRVTVAKAEAARARLVASGKP
AAPVLVADTTVTIDGAILGKPADADDALAMLTRLAGRAHEVLTAVAVIGADGALLPPALSRSSVRFAAAPRDALMRYVDT
GEPFGKAGAYAIQGRAAEFVERIDGSHSGIMGLPLFETAALLRAARVAF

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=195, Percent_Identity=35.8974358974359, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI291045183, Length=194, Percent_Identity=32.9896907216495, Blast_Score=93, Evalue=1e-19,
Organism=Homo sapiens, GI291045181, Length=118, Percent_Identity=39.8305084745763, Blast_Score=88, Evalue=6e-18,
Organism=Homo sapiens, GI310133124, Length=118, Percent_Identity=39.8305084745763, Blast_Score=87, Evalue=1e-17,
Organism=Escherichia coli, GI1789646, Length=194, Percent_Identity=43.298969072165, Blast_Score=136, Evalue=9e-34,
Organism=Escherichia coli, GI87081830, Length=196, Percent_Identity=27.0408163265306, Blast_Score=72, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI193202443, Length=200, Percent_Identity=32.5, Blast_Score=104, Evalue=3e-23,
Organism=Drosophila melanogaster, GI78706856, Length=191, Percent_Identity=38.7434554973822, Blast_Score=115, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 21986; Mature: 21855

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSLSPALFPTLYLASQSPRRQELLQQIGVRFELLLPRADEDAEALEAELPGEAADTYV
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHCCCCHHHHHHH
RRVTVAKAEAARARLVASGKPAAPVLVADTTVTIDGAILGKPADADDALAMLTRLAGRAH
HHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEECCEEECCCCCHHHHHHHHHHHHHHHH
EVLTAVAVIGADGALLPPALSRSSVRFAAAPRDALMRYVDTGEPFGKAGAYAIQGRAAEF
HHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCEEECCHHHHH
VERIDGSHSGIMGLPLFETAALLRAARVAF
HHHHCCCCCCEECCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PSSLSPALFPTLYLASQSPRRQELLQQIGVRFELLLPRADEDAEALEAELPGEAADTYV
CCCCCCHHHHHHHHCCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHCCCCHHHHHHH
RRVTVAKAEAARARLVASGKPAAPVLVADTTVTIDGAILGKPADADDALAMLTRLAGRAH
HHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEECCEEECCCCCHHHHHHHHHHHHHHHH
EVLTAVAVIGADGALLPPALSRSSVRFAAAPRDALMRYVDTGEPFGKAGAYAIQGRAAEF
HHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCEEECCHHHHH
VERIDGSHSGIMGLPLFETAALLRAARVAF
HHHHCCCCCCEECCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA