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The map label for this gene is rng [H]

Identifier: 161524153

GI number: 161524153

Start: 1072018

End: 1073490

Strand: Reverse

Name: rng [H]

Synonym: Bmul_0977

Alternate gene names: 161524153

Gene position: 1073490-1072018 (Counterclockwise)

Preceding gene: 161524154

Following gene: 161524152

Centisome position: 31.13

GC content: 64.83

Gene sequence:

>1473_bases
ATGAACGAAGAAATCCTGATCAACCTCACGCCGCAGGAAACGCGCGTCGCACTCGTGCAGCAAGGCGCGGTGCAGGAACT
TCACGTCGAGCGCACGCTGTCGCGCGGACGCGTCGGCAACATCTATCTCGGCAAGGTCGTGCGCGTGCTGCCCGGCATGC
AGTCGGCGTTCATCGACATCGGTCTCGAACGCGCGGCGTTCCTGCACGTCGCCGACATCTGGCAGCCGCGCATCGCCGGC
GAGCCGCCGTCGGGCGCGGCCCATCACCAGCCGATCGAGAAAACCGTGTTCGAGGGCCAGACGCTGATGGTGCAGGTGAT
CAAGGATCCGATCGGCACGAAGGGCGCGCGGCTGTCGACGCAAGTGAGCATCGCGGGTCGCACGCTCGTCTATCTGCCGC
AGGAGCCGCACATCGGCATCTCGCAGAAGATCGAGAGCGAGGCCGAGCGCGAAGCCGTGCGCGCGCGCCTGACGGCCGTG
ATTCCGCCGGACGAGAAAGGCGGCTATATCGTGCGCACGATCGCGGAAGACGCGACGTCCGAAGAACTGGCGGCCGACGT
CGCCTATCTGCGCAAGACCTGGGCGACGATCGTCGCGCAGGCGCAGCGGCTGCCGGCGACGAGCCTGCTCTATCAGGATC
TCGATCTCGCGCAGCGCGTGCTACGCGATTTCGCGAACGACGACACGACGCGCATCCAGGTCGATTCGCGCGAAACGTAT
CAGCGCCTCGCGGAATTCGCGGCCGAGTTCACGCCGGCCGTGAGCCCGAAGCTGCACCACTACACCGGCGAGCGGCCGCT
GTTCGACCTCTACAACATCGAGACGGAGATTCAGCGTGCGCTGTCGCGCCGCGTCGATCTGAAATCGGGCGGCTATCTGA
TGATCGACCAGACCGAGGCGATGACGACGATCGACGTGAACACCGGCGGCTACGTCGGCGCGCGCAACTTCGACGACACG
ATCTTCAAGACCAATCTCGAAGCCGCGCATACGATCGCGCGGCAGCTGCGGCTGCGCAATCTCGGCGGGATCATCATCAT
CGACTTCATCGACATGGAGAACGCCGAGCATCGCGACGCCGTGCTGTCCGAGCTGAAGAAGGCGCTGTCGCGCGACCGCA
CGCGCGTGACCGTCAACGGCTTCTCGCAGCTCGGGCTCGTCGAGATGACGCGCAAGCGCACGCGCGAATCGCTCGCGCAC
GTGCTGTGCGAGCCGTGTCCGACCTGCCAGGGCAAGGGCCAGGTGAAGACGTCGCGTACCGTCTGCTACGACATCCTGCG
CGAGATCCTGCGCGAATCGCGCCAGTTCAATCCGCGCGAATTCCGCGTGATCGCCGCGCAGCAGGTGATCGATCTGTTTC
TCGACGAGGAGTCGCAGCATCTGGCGATGCTGATCGACTTCATCGGCAAGCCGGTGTCGCTGCAGGTGGAGTCGAACCTG
AGTCAGGAGCAGTACGATATCGTGCTGATGTAG

Upstream 100 bases:

>100_bases
TCGAGCGAATCGACGGTTCCCATTCGGGTATCATGGGTCTGCCCCTTTTTGAGACAGCCGCGCTGCTGCGCGCCGCGCGC
GTCGCCTTCTGAACCGCACC

Downstream 100 bases:

>100_bases
CATCCGCGCGCAGTCCGTGCGCGCAAGCGCCGCGGCGCCGCATCGTGCGGCGCGCGGCGCATTCCGTTCCCCACTCTCAT
TCATCCCGCATCATGAGCCA

Product: ribonuclease

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDIGLERAAFLHVADIWQPRIAG
EPPSGAAHHQPIEKTVFEGQTLMVQVIKDPIGTKGARLSTQVSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAV
IPPDEKGGYIVRTIAEDATSEELAADVAYLRKTWATIVAQAQRLPATSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETY
QRLAEFAAEFTPAVSPKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLMIDQTEAMTTIDVNTGGYVGARNFDDT
IFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAVLSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAH
VLCEPCPTCQGKGQVKTSRTVCYDILREILRESRQFNPREFRVIAAQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNL
SQEQYDIVLM

Sequences:

>Translated_490_residues
MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDIGLERAAFLHVADIWQPRIAG
EPPSGAAHHQPIEKTVFEGQTLMVQVIKDPIGTKGARLSTQVSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAV
IPPDEKGGYIVRTIAEDATSEELAADVAYLRKTWATIVAQAQRLPATSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETY
QRLAEFAAEFTPAVSPKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLMIDQTEAMTTIDVNTGGYVGARNFDDT
IFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAVLSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAH
VLCEPCPTCQGKGQVKTSRTVCYDILREILRESRQFNPREFRVIAAQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNL
SQEQYDIVLM
>Mature_490_residues
MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDIGLERAAFLHVADIWQPRIAG
EPPSGAAHHQPIEKTVFEGQTLMVQVIKDPIGTKGARLSTQVSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAV
IPPDEKGGYIVRTIAEDATSEELAADVAYLRKTWATIVAQAQRLPATSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETY
QRLAEFAAEFTPAVSPKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLMIDQTEAMTTIDVNTGGYVGARNFDDT
IFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAVLSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAH
VLCEPCPTCQGKGQVKTSRTVCYDILREILRESRQFNPREFRVIAAQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNL
SQEQYDIVLM

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=494, Percent_Identity=56.0728744939271, Blast_Score=538, Evalue=1e-154,
Organism=Escherichia coli, GI1787325, Length=458, Percent_Identity=38.646288209607, Blast_Score=288, Evalue=5e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 55051; Mature: 55051

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDI
CCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHH
GLERAAFLHVADIWQPRIAGEPPSGAAHHQPIEKTVFEGQTLMVQVIKDPIGTKGARLST
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCEEE
QVSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVIPPDEKGGYIVRTIAEDATS
EEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEECCCCCH
EELAADVAYLRKTWATIVAQAQRLPATSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETY
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHH
QRLAEFAAEFTPAVSPKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLMIDQTEA
HHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
MTTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDA
EEEEEECCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHH
VLSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPTCQGKGQVKTSRT
HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
VCYDILREILRESRQFNPREFRVIAAQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNL
HHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCC
SQEQYDIVLM
CCCCCCEEEC
>Mature Secondary Structure
MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDI
CCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHH
GLERAAFLHVADIWQPRIAGEPPSGAAHHQPIEKTVFEGQTLMVQVIKDPIGTKGARLST
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCEEE
QVSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVIPPDEKGGYIVRTIAEDATS
EEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEECCCCCH
EELAADVAYLRKTWATIVAQAQRLPATSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETY
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHH
QRLAEFAAEFTPAVSPKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLMIDQTEA
HHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
MTTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDA
EEEEEECCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHH
VLSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPTCQGKGQVKTSRT
HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
VCYDILREILRESRQFNPREFRVIAAQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNL
HHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCC
SQEQYDIVLM
CCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]