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The map label for this gene is sodC2 [H]

Identifier: 161524039

GI number: 161524039

Start: 940280

End: 940816

Strand: Direct

Name: sodC2 [H]

Synonym: Bmul_0860

Alternate gene names: 161524039

Gene position: 940280-940816 (Clockwise)

Preceding gene: 161524038

Following gene: 161524040

Centisome position: 27.27

GC content: 74.12

Gene sequence:

>537_bases
ATGAACGAACGACATCTCGGCGCGTACGCGGGCCGCGCGCGGCGCGCGCTGCTGGCGGCCGCCGTGCTGGGCCTGCTGGC
CGGCTGCACCTCCTTTTCCTCGTCGCACGAAAAACGCGCGGACGCGCAACTGCAGCCGACGGTCGGTTCGCAAACGCGCG
GCACGGTGACGTTCGTCGAGCGCCCGGACGGCGTCCAGGTGACCTACAACCTCGTCGGCCTGCCGCCGAACAGCGATCAT
GCGCTGCAGGTGCACGAGCGCGGCGACTGCAACGCGGGCGACGGCTCGAGCGCGGGCCAGGTGTTCGCGCCCGCCGCCGA
TCGGCTGCGCGCGGGCGCGCGCGTCGCCGGCGATCTCGGCAACATCCACGCCGACGCGAACGGCGTCGCGGCCGGTTTCA
TCGTCGCGCCCGATCTGGCCCTCGACGGCGTGCGCTCGGCGCTGAACCGCTCGGCGCTGGTCCATCGCGACGCGAGCGAC
CCCGCGTTTCCGCAGCACGGCGCGGGGCCCGCGCTCGCCTGCGGCGTGATCCGGTGA

Upstream 100 bases:

>100_bases
GCGCCGGAAGGCGCGGTATCATGGCGACTTTCCCCCGGGTCCCTTTACCCGCCCGGCACGGCTGCCGCATCGAACGGCCG
CCGGCCGGCATGAGGATCGA

Downstream 100 bases:

>100_bases
CGGCCGCCGCATGCGCGCGCCGATGATCGCGTAAAATGTGCGCCTTCTGCGGCCGCCGCGTCGAACCGGCGGCCTTCGTT
TTCGTTTACCGTCACGCAGC

Product: copper/zinc binding superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MNERHLGAYAGRARRALLAAAVLGLLAGCTSFSSSHEKRADAQLQPTVGSQTRGTVTFVERPDGVQVTYNLVGLPPNSDH
ALQVHERGDCNAGDGSSAGQVFAPAADRLRAGARVAGDLGNIHADANGVAAGFIVAPDLALDGVRSALNRSALVHRDASD
PAFPQHGAGPALACGVIR

Sequences:

>Translated_178_residues
MNERHLGAYAGRARRALLAAAVLGLLAGCTSFSSSHEKRADAQLQPTVGSQTRGTVTFVERPDGVQVTYNLVGLPPNSDH
ALQVHERGDCNAGDGSSAGQVFAPAADRLRAGARVAGDLGNIHADANGVAAGFIVAPDLALDGVRSALNRSALVHRDASD
PAFPQHGAGPALACGVIR
>Mature_178_residues
MNERHLGAYAGRARRALLAAAVLGLLAGCTSFSSSHEKRADAQLQPTVGSQTRGTVTFVERPDGVQVTYNLVGLPPNSDH
ALQVHERGDCNAGDGSSAGQVFAPAADRLRAGARVAGDLGNIHADANGVAAGFIVAPDLALDGVRSALNRSALVHRDASD
PAFPQHGAGPALACGVIR

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018152
- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 18206; Mature: 18206

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNERHLGAYAGRARRALLAAAVLGLLAGCTSFSSSHEKRADAQLQPTVGSQTRGTVTFVE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEECCCCCCCCCCEEEEEE
RPDGVQVTYNLVGLPPNSDHALQVHERGDCNAGDGSSAGQVFAPAADRLRAGARVAGDLG
CCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEECCCHHHHHCCCCEECCCC
NIHADANGVAAGFIVAPDLALDGVRSALNRSALVHRDASDPAFPQHGAGPALACGVIR
CEECCCCCCEEEEEECCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHCCCCCC
>Mature Secondary Structure
MNERHLGAYAGRARRALLAAAVLGLLAGCTSFSSSHEKRADAQLQPTVGSQTRGTVTFVE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEECCCCCCCCCCEEEEEE
RPDGVQVTYNLVGLPPNSDHALQVHERGDCNAGDGSSAGQVFAPAADRLRAGARVAGDLG
CCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEECCCHHHHHCCCCEECCCC
NIHADANGVAAGFIVAPDLALDGVRSALNRSALVHRDASDPAFPQHGAGPALACGVIR
CEECCCCCCEEEEEECCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]