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The map label for this gene is dcd

Identifier: 161524040

GI number: 161524040

Start: 940935

End: 941504

Strand: Direct

Name: dcd

Synonym: Bmul_0861

Alternate gene names: 161524040

Gene position: 940935-941504 (Clockwise)

Preceding gene: 161524039

Following gene: 161524041

Centisome position: 27.29

GC content: 61.05

Gene sequence:

>570_bases
ATGAGCATCAAGTCCGACAAATGGATTCGGCGCATGGCCGAAGAGCACAAGATGATCGAGCCGTTCGTGCCCGATCAGGT
CCGCGCGTCCGAGGACGGTCGCCGGATCGTCAGCTACGGCACGTCGAGCTACGGCTACGACATCCGCTGCGCGGACGAAT
TCAAGATCTTCACGAACATCAACTCGACCATCGTCGATCCGAAGAACTTCGACGAGGGCTCGTTTGTCGATTTCAAGGGC
GACGTGTGCATCATCCCGCCGAACTCGTTCGCGCTGGCCCGCACCGTCGAATATTTCCGCATCCCGCGCACCGTGCTGAC
GGTCTGCCTCGGCAAGTCGACGTACGCGCGCTGCGGGATCATCGTCAACGTGACGCCGTTCGAGCCCGAATGGGAAGGCT
ACGTCACGCTGGAATTCTCGAATACCACGCCGTTGCCCGCGAAGATCTACGCGAACGAAGGCGTCGCGCAGGTGCTCTTC
TTCGAGAGCGACGAGGTGTGCGACGTGTCGTATGCCGATCGCGGCGGCAAGTATCAGGGGCAGCGCGGTGTCACGCTGCC
GAAAACCTGA

Upstream 100 bases:

>100_bases
GCCGATGATCGCGTAAAATGTGCGCCTTCTGCGGCCGCCGCGTCGAACCGGCGGCCTTCGTTTTCGTTTACCGTCACGCA
GCGTTTCCTGGCGCCCCGAT

Downstream 100 bases:

>100_bases
TCTGCTTGCATAACGTCTCACCAGTTTCCGGGTGACCGCTGCGCGTGACGCGCCGCGGTCGTTCTTTTTGGAGAATCGCC
CATGAAGTTTCGTTTCCCCG

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSIKSDKWIRRMAEEHKMIEPFVPDQVRASEDGRRIVSYGTSSYGYDIRCADEFKIFTNINSTIVDPKNFDEGSFVDFKG
DVCIIPPNSFALARTVEYFRIPRTVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVLF
FESDEVCDVSYADRGGKYQGQRGVTLPKT

Sequences:

>Translated_189_residues
MSIKSDKWIRRMAEEHKMIEPFVPDQVRASEDGRRIVSYGTSSYGYDIRCADEFKIFTNINSTIVDPKNFDEGSFVDFKG
DVCIIPPNSFALARTVEYFRIPRTVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVLF
FESDEVCDVSYADRGGKYQGQRGVTLPKT
>Mature_188_residues
SIKSDKWIRRMAEEHKMIEPFVPDQVRASEDGRRIVSYGTSSYGYDIRCADEFKIFTNINSTIVDPKNFDEGSFVDFKGD
VCIIPPNSFALARTVEYFRIPRTVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVLFF
ESDEVCDVSYADRGGKYQGQRGVTLPKT

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_BURA4 (B1YUS8)

Other databases:

- EMBL:   CP001025
- RefSeq:   YP_001809040.1
- ProteinModelPortal:   B1YUS8
- SMR:   B1YUS8
- GeneID:   6178197
- GenomeReviews:   CP001025_GR
- KEGG:   bac:BamMC406_2346
- HOGENOM:   HBG553199
- OMA:   MEYFRIP
- ProtClustDB:   PRK00416
- BioCyc:   BAMB398577:BAMMC406_2346-MONOMER
- HAMAP:   MF_00146
- InterPro:   IPR011962
- InterPro:   IPR008180
- TIGRFAMs:   TIGR02274

Pfam domain/function: PF00692 dUTPase

EC number: =3.5.4.13

Molecular weight: Translated: 21356; Mature: 21225

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKSDKWIRRMAEEHKMIEPFVPDQVRASEDGRRIVSYGTSSYGYDIRCADEFKIFTNI
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEECC
NSTIVDPKNFDEGSFVDFKGDVCIIPPNSFALARTVEYFRIPRTVLTVCLGKSTYARCGI
CCEEECCCCCCCCCEEEECCCEEEECCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCEE
IVNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVLFFESDEVCDVSYADRGGKYQG
EEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCCCCCCCC
QRGVTLPKT
CCCCCCCCC
>Mature Secondary Structure 
SIKSDKWIRRMAEEHKMIEPFVPDQVRASEDGRRIVSYGTSSYGYDIRCADEFKIFTNI
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEECC
NSTIVDPKNFDEGSFVDFKGDVCIIPPNSFALARTVEYFRIPRTVLTVCLGKSTYARCGI
CCEEECCCCCCCCCEEEECCCEEEECCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCEE
IVNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVLFFESDEVCDVSYADRGGKYQG
EEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCCCCCCCC
QRGVTLPKT
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA