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The map label for this gene is 161523647

Identifier: 161523647

GI number: 161523647

Start: 508050

End: 508667

Strand: Direct

Name: 161523647

Synonym: Bmul_0467

Alternate gene names: NA

Gene position: 508050-508667 (Clockwise)

Preceding gene: 161523646

Following gene: 161523649

Centisome position: 14.73

GC content: 66.18

Gene sequence:

>618_bases
ATGCTCCACTCATGGTTCGGGCGCCGCGCGCGCCAGCGCTGGGCGCTCGTCTGCGCATTCGCGGCGGCGCTGCTGCTCGC
CGCTTGCGACAACGCGCCGAAATTCCAGAATCTCGACATCACCGGCAACACGCAGTTCGGCAGCGATTTCGCGTTGCCCG
ACACGAGCGGCAAGGTGCGCACGCTCGCCGACTTCAAGGGCAAGGCCGTCGTGATGTTCTTCGGCTATACGCACTGCCCG
GACGTGTGTCCGACGACGATGGCCGAATTGTCCGAAGCGCTGAAGCAGCTCGGGCCCGATGCCGCGAAGCGCGTGCAGGT
GCTGTTCGTGACGGTCGATCCCGAGCGCGATACGCCCGCGCTGCTCGGCCAGTATGTGCCCGCGTTCGATCCGTCGTTCA
TCGGGCTGCGTCCGGCCGACGACGCGCAGCTGAAGAAGGTGACGAAGGATTTCCGCGTCTATTACGCGAAAGTGCCCGGC
AAGACGCCGGGCAGCTACACGATGGATCACACGGCCGCGAGCTACGTGTTCGATCCGGACGGCAAGCTGCGCCTGTTCGT
GCGCGACGGTCAGGGCCCCGGCCCGTGGGTGCACGACCTGAAGCTGCTGATCGGCTGA

Upstream 100 bases:

>100_bases
CCGTTATTCGATCGTCTATCTGTCGCTGCTGTTTGCCGCGCTGCTCGCCGATCACTACGCGCGCCCGCTGCTCGGCGTGT
AACCGCACGGTTTGAACGCA

Downstream 100 bases:

>100_bases
GCGGCCGGCATGCCGCGCTTGCTCGGGCGTTCGACCCGGCAGGCGCGTGACGGCCGCGAGCCGCCGTCACGCGTTCCTTC
TTGTTCTCCCGCCTTTTTGC

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MLHSWFGRRARQRWALVCAFAAALLLAACDNAPKFQNLDITGNTQFGSDFALPDTSGKVRTLADFKGKAVVMFFGYTHCP
DVCPTTMAELSEALKQLGPDAAKRVQVLFVTVDPERDTPALLGQYVPAFDPSFIGLRPADDAQLKKVTKDFRVYYAKVPG
KTPGSYTMDHTAASYVFDPDGKLRLFVRDGQGPGPWVHDLKLLIG

Sequences:

>Translated_205_residues
MLHSWFGRRARQRWALVCAFAAALLLAACDNAPKFQNLDITGNTQFGSDFALPDTSGKVRTLADFKGKAVVMFFGYTHCP
DVCPTTMAELSEALKQLGPDAAKRVQVLFVTVDPERDTPALLGQYVPAFDPSFIGLRPADDAQLKKVTKDFRVYYAKVPG
KTPGSYTMDHTAASYVFDPDGKLRLFVRDGQGPGPWVHDLKLLIG
>Mature_205_residues
MLHSWFGRRARQRWALVCAFAAALLLAACDNAPKFQNLDITGNTQFGSDFALPDTSGKVRTLADFKGKAVVMFFGYTHCP
DVCPTTMAELSEALKQLGPDAAKRVQVLFVTVDPERDTPALLGQYVPAFDPSFIGLRPADDAQLKKVTKDFRVYYAKVPG
KTPGSYTMDHTAASYVFDPDGKLRLFVRDGQGPGPWVHDLKLLIG

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI281182727, Length=134, Percent_Identity=40.2985074626866, Blast_Score=114, Evalue=7e-26,
Organism=Homo sapiens, GI281182722, Length=134, Percent_Identity=40.2985074626866, Blast_Score=114, Evalue=7e-26,
Organism=Homo sapiens, GI281182716, Length=134, Percent_Identity=40.2985074626866, Blast_Score=114, Evalue=7e-26,
Organism=Homo sapiens, GI153791313, Length=134, Percent_Identity=40.2985074626866, Blast_Score=114, Evalue=7e-26,
Organism=Homo sapiens, GI4759068, Length=147, Percent_Identity=32.6530612244898, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17531419, Length=146, Percent_Identity=33.5616438356164, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6319498, Length=143, Percent_Identity=36.3636363636364, Blast_Score=106, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6319511, Length=143, Percent_Identity=36.3636363636364, Blast_Score=103, Evalue=2e-23,
Organism=Drosophila melanogaster, GI19920710, Length=143, Percent_Identity=37.0629370629371, Blast_Score=114, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 22543; Mature: 22543

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHSWFGRRARQRWALVCAFAAALLLAACDNAPKFQNLDITGNTQFGSDFALPDTSGKVR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEE
TLADFKGKAVVMFFGYTHCPDVCPTTMAELSEALKQLGPDAAKRVQVLFVTVDPERDTPA
EEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHH
LLGQYVPAFDPSFIGLRPADDAQLKKVTKDFRVYYAKVPGKTPGSYTMDHTAASYVFDPD
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCEEECCCCEEEEECCC
GKLRLFVRDGQGPGPWVHDLKLLIG
CCEEEEEECCCCCCCHHHHHHEECC
>Mature Secondary Structure
MLHSWFGRRARQRWALVCAFAAALLLAACDNAPKFQNLDITGNTQFGSDFALPDTSGKVR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEE
TLADFKGKAVVMFFGYTHCPDVCPTTMAELSEALKQLGPDAAKRVQVLFVTVDPERDTPA
EEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHH
LLGQYVPAFDPSFIGLRPADDAQLKKVTKDFRVYYAKVPGKTPGSYTMDHTAASYVFDPD
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCEEECCCCEEEEECCC
GKLRLFVRDGQGPGPWVHDLKLLIG
CCEEEEEECCCCCCCHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA