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The map label for this gene is yraN [C]

Identifier: 161523377

GI number: 161523377

Start: 220876

End: 221289

Strand: Direct

Name: yraN [C]

Synonym: Bmul_0197

Alternate gene names: 161523377

Gene position: 220876-221289 (Clockwise)

Preceding gene: 161523375

Following gene: 161523378

Centisome position: 6.41

GC content: 73.19

Gene sequence:

>414_bases
TTGTGCCACGCGCGCGCCGCGCGGCCCGACGACGCGTGCGCGGCCGACAACTTTTCCGGCGCGGCGCGATCCAAGCCGAT
CGGCGCCGCGTTCGAGTTGCGCGCGCGGCAGTTCCTCGCGCGCCGCGGGCTCGCATTCGTCGCGGCGAACGTGACGATGC
GCGGCGGCGAACTCGATCTCGTGATGCGCGACGCCGACACGCTCGTGTTCGTCGAAGTGCGCGCACGACGCAGTACGCGG
CACGGCGGCGCGGCCGCGAGCGTCGGTGCGCGCAAGCGGCAGCGGCTCGTCACGGCGGCGCTGCGCTTCTGGGCGCATCA
CGATCCGGCTGCCGCGTGCCGGTTCGACGTGATCGCGTTCGAGGCCGGGCGGCTCGTCTGGCTGCGCGATGCATTTCGTG
CCGACGATGCGTAG

Upstream 100 bases:

>100_bases
GAGGGCGGCTTCCGGGTAGTGCTGCGTGTGCGCGAGTTCGAGGAGGGCAGTCATGGCAGGCAATGCGCGCGATCGCCGCG
CAAGCGGAACAAGGACGGCA

Downstream 100 bases:

>100_bases
CCGCGAGCTGTGACGAGATGTAAAGAGTTCTTGCCGGACCGCGGGACACGGTGCCGGAGTACGGTAAACTCGCCGCACTC
ACGATGTGTCGCGCGACGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MCHARAARPDDACAADNFSGAARSKPIGAAFELRARQFLARRGLAFVAANVTMRGGELDLVMRDADTLVFVEVRARRSTR
HGGAAASVGARKRQRLVTAALRFWAHHDPAAACRFDVIAFEAGRLVWLRDAFRADDA

Sequences:

>Translated_137_residues
MCHARAARPDDACAADNFSGAARSKPIGAAFELRARQFLARRGLAFVAANVTMRGGELDLVMRDADTLVFVEVRARRSTR
HGGAAASVGARKRQRLVTAALRFWAHHDPAAACRFDVIAFEAGRLVWLRDAFRADDA
>Mature_137_residues
MCHARAARPDDACAADNFSGAARSKPIGAAFELRARQFLARRGLAFVAANVTMRGGELDLVMRDADTLVFVEVRARRSTR
HGGAAASVGARKRQRLVTAALRFWAHHDPAAACRFDVIAFEAGRLVWLRDAFRADDA

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

Organism=Escherichia coli, GI1789538, Length=120, Percent_Identity=47.5, Blast_Score=106, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 14951; Mature: 14951

Theoretical pI: Translated: 11.59; Mature: 11.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCHARAARPDDACAADNFSGAARSKPIGAAFELRARQFLARRGLAFVAANVTMRGGELDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCEEEE
VMRDADTLVFVEVRARRSTRHGGAAASVGARKRQRLVTAALRFWAHHDPAAACRFDVIAF
EEECCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEE
EAGRLVWLRDAFRADDA
CCCCEEEEECCCCCCCC
>Mature Secondary Structure
MCHARAARPDDACAADNFSGAARSKPIGAAFELRARQFLARRGLAFVAANVTMRGGELDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCEEEE
VMRDADTLVFVEVRARRSTRHGGAAASVGARKRQRLVTAALRFWAHHDPAAACRFDVIAF
EEECCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEE
EAGRLVWLRDAFRADDA
CCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA