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The map label for this gene is flhC [H]

Identifier: 161523341

GI number: 161523341

Start: 181759

End: 182355

Strand: Direct

Name: flhC [H]

Synonym: Bmul_0161

Alternate gene names: 161523341

Gene position: 181759-182355 (Clockwise)

Preceding gene: 161523340

Following gene: 161523342

Centisome position: 5.27

GC content: 64.49

Gene sequence:

>597_bases
ATGGGCGCAGCATCCGAACAACGACACGCGAACGTTATCACCATGGCAAGCAAAAGCGTCGTGATCGAGGTGAAGGAAAT
CACCCTCGCCATCGAACTGATCGAACTGGGCGCCCGGCTGCAGCTGCTGGAGGCGGAGACGAGCCTGTCGCGGGATCGTC
TGATCAAGCTGTACAAGGAACTGAAGGGCGTTTCGCCGCCGAAGGGGATGCTGCCGTTCTCGACGGACTGGTTCATGACG
TGGCAGCCGAACATCCATTCGTCGCTGTTCTACAACATCTACCGCTTCATGCAGGATCACGGCCGCTGCGAGCCGATCCA
CGCGATCGTGAAGGCGTACCGGCTCTATCTGGAGCACGTCTCGCTGTCCGGCGACGAAGCGGCGCTGAGCCTCACGCGCG
CCTGGACGCTCGTGCGCTTCTTCGATTCCGGGATGCTGCAGATGACGCCGTGCACGCGCTGCGGCGGCCATTTCGTCGCC
CATGCGCATGATCCACAGCAAGGTTTCGTCTGCGGGCTGTGCCAGCCGCCGTCGCGCGCGGGCAAGACGCGCAAGGCGGC
TGCCGCGCGCGCCGAGCTGGCCGCCGCGGCCGCGTAA

Upstream 100 bases:

>100_bases
CGCGCACTCGGCGATCCTGATGGCCGGACAACCGGTCGAAAGCGTCCGCTGATCCTTCCTGCCCTGCGTTCGTCCCGGCG
CGCCGCGCCGGCGCCGGCGC

Downstream 100 bases:

>100_bases
GGCGCGCCGCGCGGCGTATCGGCCGTGCCGCATGGCTTTGCGGTGCGCGTGCGCGCGGCGTCATGCGCACCGTGCCGCGC
CGGCGGATTGCTGGTAAACA

Product: transcriptional activator FlhC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MGAASEQRHANVITMASKSVVIEVKEITLAIELIELGARLQLLEAETSLSRDRLIKLYKELKGVSPPKGMLPFSTDWFMT
WQPNIHSSLFYNIYRFMQDHGRCEPIHAIVKAYRLYLEHVSLSGDEAALSLTRAWTLVRFFDSGMLQMTPCTRCGGHFVA
HAHDPQQGFVCGLCQPPSRAGKTRKAAAARAELAAAAA

Sequences:

>Translated_198_residues
MGAASEQRHANVITMASKSVVIEVKEITLAIELIELGARLQLLEAETSLSRDRLIKLYKELKGVSPPKGMLPFSTDWFMT
WQPNIHSSLFYNIYRFMQDHGRCEPIHAIVKAYRLYLEHVSLSGDEAALSLTRAWTLVRFFDSGMLQMTPCTRCGGHFVA
HAHDPQQGFVCGLCQPPSRAGKTRKAAAARAELAAAAA
>Mature_197_residues
GAASEQRHANVITMASKSVVIEVKEITLAIELIELGARLQLLEAETSLSRDRLIKLYKELKGVSPPKGMLPFSTDWFMTW
QPNIHSSLFYNIYRFMQDHGRCEPIHAIVKAYRLYLEHVSLSGDEAALSLTRAWTLVRFFDSGMLQMTPCTRCGGHFVAH
AHDPQQGFVCGLCQPPSRAGKTRKAAAARAELAAAAA

Specific function: Transcriptional activator. Together with flhD it acts as a compound sigma factor that activates class 2 flagellar genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flhC family [H]

Homologues:

Organism=Escherichia coli, GI1788201, Length=179, Percent_Identity=58.659217877095, Blast_Score=232, Evalue=1e-62,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007944
- ProDom:   PD016592 [H]

Pfam domain/function: PF05280 FlhC [H]

EC number: NA

Molecular weight: Translated: 21958; Mature: 21826

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAASEQRHANVITMASKSVVIEVKEITLAIELIELGARLQLLEAETSLSRDRLIKLYKE
CCCCCCCCCCCEEEEECCEEEEEEHHHHHHHHHHHHCCCEEEEHHHHHCCHHHHHHHHHH
LKGVSPPKGMLPFSTDWFMTWQPNIHSSLFYNIYRFMQDHGRCEPIHAIVKAYRLYLEHV
HCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SLSGDEAALSLTRAWTLVRFFDSGMLQMTPCTRCGGHFVAHAHDPQQGFVCGLCQPPSRA
CCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEECCCCCCCCEEECCCCCHHC
GKTRKAAAARAELAAAAA
CCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GAASEQRHANVITMASKSVVIEVKEITLAIELIELGARLQLLEAETSLSRDRLIKLYKE
CCCCCCCCCCEEEEECCEEEEEEHHHHHHHHHHHHCCCEEEEHHHHHCCHHHHHHHHHH
LKGVSPPKGMLPFSTDWFMTWQPNIHSSLFYNIYRFMQDHGRCEPIHAIVKAYRLYLEHV
HCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SLSGDEAALSLTRAWTLVRFFDSGMLQMTPCTRCGGHFVAHAHDPQQGFVCGLCQPPSRA
CCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEECCCCCCCCEEECCCCCHHC
GKTRKAAAARAELAAAAA
CCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11060496 [H]