Click here to switch to the map view.

The map label for this gene is flhD [H]

Identifier: 161523340

GI number: 161523340

Start: 181390

End: 181710

Strand: Direct

Name: flhD [H]

Synonym: Bmul_0160

Alternate gene names: 161523340

Gene position: 181390-181710 (Clockwise)

Preceding gene: 161523338

Following gene: 161523341

Centisome position: 5.26

GC content: 63.86

Gene sequence:

>321_bases
ATGAGCGCCACCAGCGAAATGCTAGGCGAGATCAAAGAGGTCAACCTGTCGTACCTGCTGCTCGCGCAGCGCCTGCTGCG
CGAAGACAAGGCAATGGGCATGTTCCGGATGGGCATCTCCGAGGAACTGGCCGACGTGCTCGCAAACCTCACGCTCGCGC
AAACGGTCAAGCTCGCCGCGTCGAATCAGATGCTGTGCCGCTTCCGCTTCGACGATCACGCGCTGCTGTCGTCGCTCGCC
GACAAAGGCCGCAGCGACGTCGTCGCACGCGCGCACTCGGCGATCCTGATGGCCGGACAACCGGTCGAAAGCGTCCGCTG
A

Upstream 100 bases:

>100_bases
AAGACTATAAACATGCCGACCGAGTGCATCAGGTGCGCCGGATCGAGCAAACGTTTCCATAAACATGAATGGCCAAAGCA
ACGCTTCTCACGGGGGAATC

Downstream 100 bases:

>100_bases
TCCTTCCTGCCCTGCGTTCGTCCCGGCGCGCCGCGCCGGCGCCGGCGCATGGGCGCAGCATCCGAACAACGACACGCGAA
CGTTATCACCATGGCAAGCA

Product: transcriptional activator FlhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSATSEMLGEIKEVNLSYLLLAQRLLREDKAMGMFRMGISEELADVLANLTLAQTVKLAASNQMLCRFRFDDHALLSSLA
DKGRSDVVARAHSAILMAGQPVESVR

Sequences:

>Translated_106_residues
MSATSEMLGEIKEVNLSYLLLAQRLLREDKAMGMFRMGISEELADVLANLTLAQTVKLAASNQMLCRFRFDDHALLSSLA
DKGRSDVVARAHSAILMAGQPVESVR
>Mature_105_residues
SATSEMLGEIKEVNLSYLLLAQRLLREDKAMGMFRMGISEELADVLANLTLAQTVKLAASNQMLCRFRFDDHALLSSLAD
KGRSDVVARAHSAILMAGQPVESVR

Specific function: Transcriptional activator. Involved in the regulation of a number of genetic systems [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FlhD family [H]

Homologues:

Organism=Escherichia coli, GI145693151, Length=110, Percent_Identity=49.0909090909091, Blast_Score=111, Evalue=8e-27,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007911
- ProDom:   PD015582 [H]

Pfam domain/function: PF05247 FlhD [H]

EC number: NA

Molecular weight: Translated: 11639; Mature: 11508

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATSEMLGEIKEVNLSYLLLAQRLLREDKAMGMFRMGISEELADVLANLTLAQTVKLAA
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC
SNQMLCRFRFDDHALLSSLADKGRSDVVARAHSAILMAGQPVESVR
CCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHCC
>Mature Secondary Structure 
SATSEMLGEIKEVNLSYLLLAQRLLREDKAMGMFRMGISEELADVLANLTLAQTVKLAA
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC
SNQMLCRFRFDDHALLSSLADKGRSDVVARAHSAILMAGQPVESVR
CCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA