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The map label for this gene is yijE [C]

Identifier: 161508994

GI number: 161508994

Start: 805936

End: 806802

Strand: Reverse

Name: yijE [C]

Synonym: USA300HOU_0753

Alternate gene names: 161508994

Gene position: 806802-805936 (Counterclockwise)

Preceding gene: 161509004

Following gene: 161508993

Centisome position: 28.08

GC content: 32.99

Gene sequence:

>867_bases
TTGAATCCTAAAGTAAAAGGTATCATTGCCATTTTAATTTCGGCTATTGGTTTCAGTTTTATGTCAGTGTTTTTCAGACT
TGCAGGTGACCTTCCTGTTTTTCAAAAATCATTAGCACGAAACTTAGTAGCAATGTTTATTCCATTATTTTTTATATATA
AATACCATCAGCCAATGTTTGGCAGACTTTCAAGTCAACCCTTATTAATAACACGATCAACACTTGGACTTATTGGTGTA
TTGTTAAATATTTATGCCATTGATCATATGGTACTTAGTGATGCCGATTCATTAATGAAACTCAATCCTTTCTGGACGAT
TTTATTAAGCATTGTTTTCTTACATGAAAAGGTAAGGAAGTATCAAATTACAGCAATGATAATTGCTATTTTAGGTATGC
TTTTAATAGTGAAACCTGAATTTTCATCATCTATGATTCCATCATTAGCTGGCTTATTCTCAGGTATTTTTGCAGCATCA
GCATATACATGTGTTCGAGCACTTAGTACAAGAGAAGCACCATATACTATAGTATTTTACTTCTCCTTATTTTCTGTCAT
CGTTTTAATACCTTTCACTGCATATACTTATGAACCAATGAGTCAGATGCAAATACTTTATCTATTAGGGGCTGGCTTAG
CTGCCGCTGTGGGTCAAATTGGTGTTACTTTAGCATATAGTTTTGCAGCAGCAAAAGATATTTCTATTTTTACGTATGCA
TCTATAATTTTCACAGCAATACTTGGATTTATTCTATTCGGAGAATCTCCAGATTTCTATGCAACATTAGGTTACGTCGT
TATTATCGGTGCAAGTTATTACATGTTTGAAAAAGCACGCCGAGACGCCAAAATAATAAAAAAATAA

Upstream 100 bases:

>100_bases
CTATTATAGTCTTTTTATAGTAAATTTCAACTATTTATGCACAACATGTTGTTTTATGCTAATATAAATACGTTAATTTT
ATATAAAAGAGGCGATAAAA

Downstream 100 bases:

>100_bases
ATTTAAAGGAGCGCTTTATATGGCACATGGCCGTCAACAAGATGAATTACAAGATATAACTTTATTAGGAAATCAAGACA
ATACTTACAATTTTGACTAT

Product: DMT superfamily drug/metabolite transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MNPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFIYKYHQPMFGRLSSQPLLITRSTLGLIGV
LLNIYAIDHMVLSDADSLMKLNPFWTILLSIVFLHEKVRKYQITAMIIAILGMLLIVKPEFSSSMIPSLAGLFSGIFAAS
AYTCVRALSTREAPYTIVFYFSLFSVIVLIPFTAYTYEPMSQMQILYLLGAGLAAAVGQIGVTLAYSFAAAKDISIFTYA
SIIFTAILGFILFGESPDFYATLGYVVIIGASYYMFEKARRDAKIIKK

Sequences:

>Translated_288_residues
MNPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFIYKYHQPMFGRLSSQPLLITRSTLGLIGV
LLNIYAIDHMVLSDADSLMKLNPFWTILLSIVFLHEKVRKYQITAMIIAILGMLLIVKPEFSSSMIPSLAGLFSGIFAAS
AYTCVRALSTREAPYTIVFYFSLFSVIVLIPFTAYTYEPMSQMQILYLLGAGLAAAVGQIGVTLAYSFAAAKDISIFTYA
SIIFTAILGFILFGESPDFYATLGYVVIIGASYYMFEKARRDAKIIKK
>Mature_288_residues
MNPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFIYKYHQPMFGRLSSQPLLITRSTLGLIGV
LLNIYAIDHMVLSDADSLMKLNPFWTILLSIVFLHEKVRKYQITAMIIAILGMLLIVKPEFSSSMIPSLAGLFSGIFAAS
AYTCVRALSTREAPYTIVFYFSLFSVIVLIPFTAYTYEPMSQMQILYLLGAGLAAAVGQIGVTLAYSFAAAKDISIFTYA
SIIFTAILGFILFGESPDFYATLGYVVIIGASYYMFEKARRDAKIIKK

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323909, Length=242, Percent_Identity=25.6198347107438, Blast_Score=75, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24645940, Length=284, Percent_Identity=25, Blast_Score=75, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31955; Mature: 31955

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]