Click here to switch to the map view.

The map label for this gene is 161509004

Identifier: 161509004

GI number: 161509004

Start: 816002

End: 816322

Strand: Reverse

Name: 161509004

Synonym: USA300HOU_0763

Alternate gene names: NA

Gene position: 816322-816002 (Counterclockwise)

Preceding gene: 161509005

Following gene: 161508994

Centisome position: 28.41

GC content: 32.4

Gene sequence:

>321_bases
TTGTCTATGCCTAAAGTTTATGGTTCATTAATCGATACTGAAACACGCTGTCGCCATTATTTTACCGAAGAAGATATTAT
TGCTATTAAATTTAAATGTTGTAATAAATACTATCCATGCTATAAGTGCCATAATGAGTTTGAAAAGCACGCCATTAAGC
GTTGGTCTGAGCCTTCATTTAACGAAAAAGCAATCTTATGCGGTGTATGCAAACACGAATTAACAATCAATGAATATATG
ATGGTAGAGCGTTGTCCAAATTGCCAATCTCGGTTTAACAATCGCTGTAAATATCACTATCATATTTATTTTGAAATTTA
A

Upstream 100 bases:

>100_bases
ATTATGTACAAAAGACCGTCAAAGAAAAATTTGGCATTGAATTAAATCGTGAAGTTCGCATTATTGGTGAACATCCAAAG
GAATCGTAAGTTAAGGAGCT

Downstream 100 bases:

>100_bases
ACAACATAGTCAAAACATTATAGGGAGTGGGTCAGACATGATAAAGCACCACTTCTGTAGAATTCCTTTTTGAAATTCTC
TATGTTTGGGCCCCGCCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Zinc Finger CHY Domain Protein; Zinc Finger CHY Domain-Containing Protein; Zinc Finger Domain-Containing Protein; Helper Of Tim Protein; Zinc Finger Domain Containing Protein

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSMPKVYGSLIDTETRCRHYFTEEDIIAIKFKCCNKYYPCYKCHNEFEKHAIKRWSEPSFNEKAILCGVCKHELTINEYM
MVERCPNCQSRFNNRCKYHYHIYFEI

Sequences:

>Translated_106_residues
MSMPKVYGSLIDTETRCRHYFTEEDIIAIKFKCCNKYYPCYKCHNEFEKHAIKRWSEPSFNEKAILCGVCKHELTINEYM
MVERCPNCQSRFNNRCKYHYHIYFEI
>Mature_105_residues
SMPKVYGSLIDTETRCRHYFTEEDIIAIKFKCCNKYYPCYKCHNEFEKHAIKRWSEPSFNEKAILCGVCKHELTINEYMM
VERCPNCQSRFNNRCKYHYHIYFEI

Specific function: Unknown

COG id: COG4357

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322766, Length=104, Percent_Identity=45.1923076923077, Blast_Score=104, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12942; Mature: 12811

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
13.2 %Cys+Met (Translated Protein)
9.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
12.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMPKVYGSLIDTETRCRHYFTEEDIIAIKFKCCNKYYPCYKCHNEFEKHAIKRWSEPSF
CCCCHHHHHHHCCHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC
NEKAILCGVCKHELTINEYMMVERCPNCQSRFNNRCKYHYHIYFEI
CCCEEEEEECCCCCCHHHHHHHHCCCCHHHHHCCCCEEEEEEEEEC
>Mature Secondary Structure 
SMPKVYGSLIDTETRCRHYFTEEDIIAIKFKCCNKYYPCYKCHNEFEKHAIKRWSEPSF
CCCHHHHHHHCCHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC
NEKAILCGVCKHELTINEYMMVERCPNCQSRFNNRCKYHYHIYFEI
CCCEEEEEECCCCCCHHHHHHHHCCCCHHHHHCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA