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The map label for this gene is arcR [H]

Identifier: 161508332

GI number: 161508332

Start: 70821

End: 71510

Strand: Reverse

Name: arcR [H]

Synonym: USA300HOU_0068

Alternate gene names: 161508332

Gene position: 71510-70821 (Counterclockwise)

Preceding gene: 161508333

Following gene: 161508331

Centisome position: 2.49

GC content: 23.62

Gene sequence:

>690_bases
ATGTATGAAGAAAATATTTATATTAAAAATTCAGAATATGAATTTGATAATAATCTTAAACAATTAGCATCATACTTAAA
TATTCCTGTTAGTATTGTTAGACCTTATAAAGAGGATTTAACACTTTATCAATATAAAAAAGGACAAGTCATATATCATT
CAACTGATCAAATAAAATTTGTATACTTTTTAGTAAATGGTTGTATTTTACATGAATCTTCTAATATTACTGGTGACAAT
TATTTAAGATTAAGTAAAGACGAAAATATATTTCCAATGAACTTCATATTTAATGAAACCCCTGCACCATATGAAATATG
TACAGCTTTGACAGATTGTAAAATATTAACTTTACCGAAAGATTTACTTGAGTATTTATGTAGAAAGCATAATGAAATAT
TTGAAAGTCTCTTCAAGAAACTTAATGAGACTATTCAATTTCAAGTAGAATATATTATGGCGTTAAGAGCTAATTCAGCT
AAAGAAAGAATTGAAAGAATACTACAAATTTTATGCCTTTCAATTGGGGATGATAATGGAGAATTCTATGAATTAAAACA
AATTATGACTGTTCAATTAATAAGTAATTTATCTGGACTTAACAGAAAAACTACTGGTGAAATAATCAGAGAATTAAAAA
TAGAAAATATTATATATCAAGATAAAAGAAATTGGATTATAAAAAAATAA

Upstream 100 bases:

>100_bases
TTGTACTTGCAATAATAGGAATAGTTCGTTTGATTACAGGTAATATTTCTGTATTTTAAGTTATGATTTAAACTAAGTAA
TTTTTAAGGGGTTTATAGTT

Downstream 100 bases:

>100_bases
CATGAATAAAATATTAATTGAAAAGGAGATATTCAAAATGAAAAATTTAAGAAATAGAAACTTTTTAACTTTGTTAGACT
TCACACAAAAAGAAATGGAA

Product: Crp family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MYEENIYIKNSEYEFDNNLKQLASYLNIPVSIVRPYKEDLTLYQYKKGQVIYHSTDQIKFVYFLVNGCILHESSNITGDN
YLRLSKDENIFPMNFIFNETPAPYEICTALTDCKILTLPKDLLEYLCRKHNEIFESLFKKLNETIQFQVEYIMALRANSA
KERIERILQILCLSIGDDNGEFYELKQIMTVQLISNLSGLNRKTTGEIIRELKIENIIYQDKRNWIIKK

Sequences:

>Translated_229_residues
MYEENIYIKNSEYEFDNNLKQLASYLNIPVSIVRPYKEDLTLYQYKKGQVIYHSTDQIKFVYFLVNGCILHESSNITGDN
YLRLSKDENIFPMNFIFNETPAPYEICTALTDCKILTLPKDLLEYLCRKHNEIFESLFKKLNETIQFQVEYIMALRANSA
KERIERILQILCLSIGDDNGEFYELKQIMTVQLISNLSGLNRKTTGEIIRELKIENIIYQDKRNWIIKK
>Mature_229_residues
MYEENIYIKNSEYEFDNNLKQLASYLNIPVSIVRPYKEDLTLYQYKKGQVIYHSTDQIKFVYFLVNGCILHESSNITGDN
YLRLSKDENIFPMNFIFNETPAPYEICTALTDCKILTLPKDLLEYLCRKHNEIFESLFKKLNETIQFQVEYIMALRANSA
KERIERILQILCLSIGDDNGEFYELKQIMTVQLISNLSGLNRKTTGEIIRELKIENIIYQDKRNWIIKK

Specific function: Positively regulates the expression of the arcABDCR operon under anaerobic conditions, thus playing an essential role in arginine catabolism. May also control the expression of genes encoding proteins which are involved in anaerobic metabolism. Can bind c

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR014710
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00027 cNMP_binding [H]

EC number: NA

Molecular weight: Translated: 27099; Mature: 27099

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEENIYIKNSEYEFDNNLKQLASYLNIPVSIVRPYKEDLTLYQYKKGQVIYHSTDQIKF
CCCCCEEEECCCCCHHHHHHHHHHHHCCCHHEECCCHHCCEEEEEECCEEEEECCCCEEE
VYFLVNGCILHESSNITGDNYLRLSKDENIFPMNFIFNETPAPYEICTALTDCKILTLPK
EEEEECCEEEECCCCCCCCCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHCCEEEECCH
DLLEYLCRKHNEIFESLFKKLNETIQFQVEYIMALRANSAKERIERILQILCLSIGDDNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
EFYELKQIMTVQLISNLSGLNRKTTGEIIRELKIENIIYQDKRNWIIKK
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCCCCC
>Mature Secondary Structure
MYEENIYIKNSEYEFDNNLKQLASYLNIPVSIVRPYKEDLTLYQYKKGQVIYHSTDQIKF
CCCCCEEEECCCCCHHHHHHHHHHHHCCCHHEECCCHHCCEEEEEECCEEEEECCCCEEE
VYFLVNGCILHESSNITGDNYLRLSKDENIFPMNFIFNETPAPYEICTALTDCKILTLPK
EEEEECCEEEECCCCCCCCCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHCCEEEECCH
DLLEYLCRKHNEIFESLFKKLNETIQFQVEYIMALRANSAKERIERILQILCLSIGDDNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
EFYELKQIMTVQLISNLSGLNRKTTGEIIRELKIENIIYQDKRNWIIKK
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA