| Definition | Staphylococcus aureus subsp. aureus USA300_TCH1516 chromosome, complete genome. |
|---|---|
| Accession | NC_010079 |
| Length | 2,872,915 |
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The map label for this gene is 161508325
Identifier: 161508325
GI number: 161508325
Start: 65661
End: 66164
Strand: Reverse
Name: 161508325
Synonym: USA300HOU_0061
Alternate gene names: NA
Gene position: 66164-65661 (Counterclockwise)
Preceding gene: 161508326
Following gene: 161508324
Centisome position: 2.3
GC content: 36.51
Gene sequence:
>504_bases ATGAATACAATCAAAAGTACGATACACACAGAAGCGATATTTAGCGATGATGAACAACATCGCTACTTACTCAAAAAGAT ATGGGATGACAAGAAACCGGCTTGTACTGTGATAACGATGTATCTTCATTTAGATGGTGTATTATCACTCGATCTTACTA CGGTTCTCATCCTCAATCAATTAGCTAATTCTGAGCAATATGGCGCTGTTTATCTCGTTAATCTTTTCTCTAATATTAAA ACACCAGAGAACCTTAAACATATCAAAGAGCCTTATGATGAGCACACAGATATACACTTAATGAAAGCAATTAGTGAAAG TGACACAGTCATTCTTGCTTATGGTGCCTATGCGAAGCGACCAGTTGTTATCGACCGTGTCGAACAAGTGATGGAAATGT TAAAACCTCATAAAAAGAAAGTAAAAAAGCTCATAAATCCAGTAACGAACGAAGTTATGCATCCACTCAACCCTAAAGCA CGTCAAAAATGGACACTAAAGTAA
Upstream 100 bases:
>100_bases TGCATTACCTAAGAAAGTCTACGTCATCCGAGAAGATGATGTAGACGCTTTTTATTATGTGATGCTTTTGCCAGAAGAAT ACTAAAGGAAGTGACGATAT
Downstream 100 bases:
>100_bases AGGAGTATTATCTATGAACCATGACAACACTATACAATCCAATTGGCGAACGGTTGCTAGTTGTTTAGCATCACAAAATT ACATTTCAATAGTAAAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MNTIKSTIHTEAIFSDDEQHRYLLKKIWDDKKPACTVITMYLHLDGVLSLDLTTVLILNQLANSEQYGAVYLVNLFSNIK TPENLKHIKEPYDEHTDIHLMKAISESDTVILAYGAYAKRPVVIDRVEQVMEMLKPHKKKVKKLINPVTNEVMHPLNPKA RQKWTLK
Sequences:
>Translated_167_residues MNTIKSTIHTEAIFSDDEQHRYLLKKIWDDKKPACTVITMYLHLDGVLSLDLTTVLILNQLANSEQYGAVYLVNLFSNIK TPENLKHIKEPYDEHTDIHLMKAISESDTVILAYGAYAKRPVVIDRVEQVMEMLKPHKKKVKKLINPVTNEVMHPLNPKA RQKWTLK >Mature_167_residues MNTIKSTIHTEAIFSDDEQHRYLLKKIWDDKKPACTVITMYLHLDGVLSLDLTTVLILNQLANSEQYGAVYLVNLFSNIK TPENLKHIKEPYDEHTDIHLMKAISESDTVILAYGAYAKRPVVIDRVEQVMEMLKPHKKKVKKLINPVTNEVMHPLNPKA RQKWTLK
Specific function: Unknown
COG id: COG4333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19305; Mature: 19305
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIKSTIHTEAIFSDDEQHRYLLKKIWDDKKPACTVITMYLHLDGVLSLDLTTVLILNQ CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH LANSEQYGAVYLVNLFSNIKTPENLKHIKEPYDEHTDIHLMKAISESDTVILAYGAYAKR HHCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCCC PVVIDRVEQVMEMLKPHKKKVKKLINPVTNEVMHPLNPKARQKWTLK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNTIKSTIHTEAIFSDDEQHRYLLKKIWDDKKPACTVITMYLHLDGVLSLDLTTVLILNQ CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH LANSEQYGAVYLVNLFSNIKTPENLKHIKEPYDEHTDIHLMKAISESDTVILAYGAYAKR HHCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCCC PVVIDRVEQVMEMLKPHKKKVKKLINPVTNEVMHPLNPKARQKWTLK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA