Click here to switch to the map view.

The map label for this gene is 161508326

Identifier: 161508326

GI number: 161508326

Start: 66180

End: 66506

Strand: Reverse

Name: 161508326

Synonym: USA300HOU_0062

Alternate gene names: NA

Gene position: 66506-66180 (Counterclockwise)

Preceding gene: 161508327

Following gene: 161508325

Centisome position: 2.31

GC content: 32.11

Gene sequence:

>327_bases
ATGGAGGAAAATAGTATGAAAATCAATCGATACATCACAAGAGGCATTAGTGAACAACTATCTCTAGACCTTCAAATCTT
ACTTTGGAACATGGTAAAAGATCGAGACAATCAACTTAATACAGATTACCTACACATTTTCAAACTACAAGAAGATGATA
ATATGTTGTCAATTACACATGAACAAGAACAACCCGCATACAAATTGGAATATCACTATACAAACTATATAAAAAATCAA
AATGCATTACCTAAGAAAGTCTACGTCATCCGAGAAGATGATGTAGACGCTTTTTATTATGTGATGCTTTTGCCAGAAGA
ATACTAA

Upstream 100 bases:

>100_bases
TAAAAGAAGGAGGGAATAACCATGAATAATTGGATCAAAGTGGCACAAATATCTGTTACAGTCATTAACGAAGTGATTGA
CATCATGAAAGAAAAGCAAA

Downstream 100 bases:

>100_bases
AGGAAGTGACGATATATGAATACAATCAAAAGTACGATACACACAGAAGCGATATTTAGCGATGATGAACAACATCGCTA
CTTACTCAAAAAGATATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MEENSMKINRYITRGISEQLSLDLQILLWNMVKDRDNQLNTDYLHIFKLQEDDNMLSITHEQEQPAYKLEYHYTNYIKNQ
NALPKKVYVIREDDVDAFYYVMLLPEEY

Sequences:

>Translated_108_residues
MEENSMKINRYITRGISEQLSLDLQILLWNMVKDRDNQLNTDYLHIFKLQEDDNMLSITHEQEQPAYKLEYHYTNYIKNQ
NALPKKVYVIREDDVDAFYYVMLLPEEY
>Mature_108_residues
MEENSMKINRYITRGISEQLSLDLQILLWNMVKDRDNQLNTDYLHIFKLQEDDNMLSITHEQEQPAYKLEYHYTNYIKNQ
NALPKKVYVIREDDVDAFYYVMLLPEEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13157; Mature: 13157

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEENSMKINRYITRGISEQLSLDLQILLWNMVKDRDNQLNTDYLHIFKLQEDDNMLSITH
CCCCCCHHHHHHHHCCCHHHCCCHHHEEEHHHCCCCCCCCCCEEEEEEEECCCCEEEEEE
EQEQPAYKLEYHYTNYIKNQNALPKKVYVIREDDVDAFYYVMLLPEEY
CCCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEECCCC
>Mature Secondary Structure
MEENSMKINRYITRGISEQLSLDLQILLWNMVKDRDNQLNTDYLHIFKLQEDDNMLSITH
CCCCCCHHHHHHHHCCCHHHCCCHHHEEEHHHCCCCCCCCCCEEEEEEEECCCCEEEEEE
EQEQPAYKLEYHYTNYIKNQNALPKKVYVIREDDVDAFYYVMLLPEEY
CCCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA