Click here to switch to the map view.

The map label for this gene is 161508317

Identifier: 161508317

GI number: 161508317

Start: 60794

End: 61162

Strand: Reverse

Name: 161508317

Synonym: USA300HOU_0053

Alternate gene names: NA

Gene position: 61162-60794 (Counterclockwise)

Preceding gene: 161508319

Following gene: 161508313

Centisome position: 2.13

GC content: 24.12

Gene sequence:

>369_bases
GTGAAAAAAGTGGAAAATACAAATAGTAATATGCATAAAAATGACAATAGTTACGTTTTATCAGCATTGAGTTATTTAAG
TATCTTTTTCGCACCTGTCATTTTACCTTTATTTGTATGGATACTTGCTGATGAACCAACATCAGAACATGGCAAAAAAG
CATTCATTAATCATATTATGACTTGGGTTAGTTTTTTTATAGGTAGATTGGCATTTATTTTTTCTAAAGAAGTCTTTGAT
AAACCTTTGGATCATCAATTATTAATATTTAGCATTCTTTTAATTATTACTATTATATTCTTTTTAATTGCTTTAATATT
ATATATCTTGAACATTAACAGAGGAATTAAAATTCTATTAAAAAAATAA

Upstream 100 bases:

>100_bases
GATTATAACAACACATACTTACAATATCGTAAGCTTCTCTTATAACTGTTGTAATAGCTCGCTATTAATGTTTTTATAAT
AGTAAAGAAAAGTAAAGAAG

Downstream 100 bases:

>100_bases
GTCACTTATATATCAACTTATTAAGGGAGTCCTATACTCCCTTTTTTAATTGTAATGTATTCTATCAGTATTACCTTTAT
TCATAGTCTAAAATACTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKKVENTNSNMHKNDNSYVLSALSYLSIFFAPVILPLFVWILADEPTSEHGKKAFINHIMTWVSFFIGRLAFIFSKEVFD
KPLDHQLLIFSILLIITIIFFLIALILYILNINRGIKILLKK

Sequences:

>Translated_122_residues
MKKVENTNSNMHKNDNSYVLSALSYLSIFFAPVILPLFVWILADEPTSEHGKKAFINHIMTWVSFFIGRLAFIFSKEVFD
KPLDHQLLIFSILLIITIIFFLIALILYILNINRGIKILLKK
>Mature_122_residues
MKKVENTNSNMHKNDNSYVLSALSYLSIFFAPVILPLFVWILADEPTSEHGKKAFINHIMTWVSFFIGRLAFIFSKEVFD
KPLDHQLLIFSILLIITIIFFLIALILYILNINRGIKILLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14156; Mature: 14156

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVENTNSNMHKNDNSYVLSALSYLSIFFAPVILPLFVWILADEPTSEHGKKAFINHIM
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
TWVSFFIGRLAFIFSKEVFDKPLDHQLLIFSILLIITIIFFLIALILYILNINRGIKILL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEE
KK
CC
>Mature Secondary Structure
MKKVENTNSNMHKNDNSYVLSALSYLSIFFAPVILPLFVWILADEPTSEHGKKAFINHIM
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
TWVSFFIGRLAFIFSKEVFDKPLDHQLLIFSILLIITIIFFLIALILYILNINRGIKILL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEE
KK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA