Click here to switch to the map view.

The map label for this gene is glnB [H]

Identifier: 160903228

GI number: 160903228

Start: 1973914

End: 1974249

Strand: Direct

Name: glnB [H]

Synonym: Pmob_1797

Alternate gene names: 160903228

Gene position: 1973914-1974249 (Clockwise)

Preceding gene: 160903227

Following gene: 160903240

Centisome position: 90.98

GC content: 31.55

Gene sequence:

>336_bases
ATGGGATACAAGAAAATTGAATGTTTTATCAGGCCAGAAAAATTTGAGGAAGTCATCGTAGGATTAGAAAAAGTTGGTAT
CGATGGCATTAACATTGATAAGATCTATGGATATGGTAGTCAAAAAGGGGAAGAAAAAGAGGTGGAAGATTACAAACAGA
AAAAAGAATATGAAGTAAAATTCAAGGAAAAGATCAAATTAGAAATAGTAACTGACGAAAACAAAGTTGAAAAAATTATA
GAAACTATAAAAGCACACGCGCAAACAGGTAAGGTAGGTGATGGAAAGATTTATATTACACCGGTAGAAGAAAGTATAAA
AATACGAACCACTTAA

Upstream 100 bases:

>100_bases
GGCTTAGATTTTGCAGAGCATGGATCTGTTAGTTATCCTGATTTAACTCCGCTTAAAGGGCGAAGCGTGAGAGTAAAAAT
TGATGAGGAAGGTGAATAAT

Downstream 100 bases:

>100_bases
ATAAAAATGCGCCCTGTGGGCGCATTTGTTTCGTTGGACCAATAAATACGAATTATTATCCATCATTGAAATTTTTGAAT
ATTTTTTACATTATTTATCA

Product: nitrogen regulatory protein P-II

Products: NA

Alternate protein names: PII signal transducing protein [H]

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MGYKKIECFIRPEKFEEVIVGLEKVGIDGINIDKIYGYGSQKGEEKEVEDYKQKKEYEVKFKEKIKLEIVTDENKVEKII
ETIKAHAQTGKVGDGKIYITPVEESIKIRTT

Sequences:

>Translated_111_residues
MGYKKIECFIRPEKFEEVIVGLEKVGIDGINIDKIYGYGSQKGEEKEVEDYKQKKEYEVKFKEKIKLEIVTDENKVEKII
ETIKAHAQTGKVGDGKIYITPVEESIKIRTT
>Mature_110_residues
GYKKIECFIRPEKFEEVIVGLEKVGIDGINIDKIYGYGSQKGEEKEVEDYKQKKEYEVKFKEKIKLEIVTDENKVEKIIE
TIKAHAQTGKVGDGKIYITPVEESIKIRTT

Specific function: P-II indirectly controls the transcription of the GS gene (glnA). P-II prevents NR-II-catalyzed conversion of NR-I to NR-I-phosphate, the transcriptional activator of glnA. When P-II is phosphorylated, these events are reversed. In nitrogen-limiting condi

COG id: COG0347

COG function: function code E; Nitrogen regulatory protein PII

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the P(II) protein family [H]

Homologues:

Organism=Escherichia coli, GI1788904, Length=108, Percent_Identity=42.5925925925926, Blast_Score=80, Evalue=4e-17,
Organism=Escherichia coli, GI1786655, Length=107, Percent_Identity=34.5794392523364, Blast_Score=74, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002187
- InterPro:   IPR011322
- InterPro:   IPR015867
- InterPro:   IPR017918
- InterPro:   IPR002332 [H]

Pfam domain/function: PF00543 P-II [H]

EC number: NA

Molecular weight: Translated: 12815; Mature: 12684

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYKKIECFIRPEKFEEVIVGLEKVGIDGINIDKIYGYGSQKGEEKEVEDYKQKKEYEVK
CCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCEE
FKEKIKLEIVTDENKVEKIIETIKAHAQTGKVGDGKIYITPVEESIKIRTT
EECEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECC
>Mature Secondary Structure 
GYKKIECFIRPEKFEEVIVGLEKVGIDGINIDKIYGYGSQKGEEKEVEDYKQKKEYEVK
CCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCEE
FKEKIKLEIVTDENKVEKIIETIKAHAQTGKVGDGKIYITPVEESIKIRTT
EECEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1905010; 8282715; 7592328 [H]