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The map label for this gene is argF [H]

Identifier: 160903166

GI number: 160903166

Start: 1895940

End: 1896950

Strand: Direct

Name: argF [H]

Synonym: Pmob_1731

Alternate gene names: 160903166

Gene position: 1895940-1896950 (Clockwise)

Preceding gene: 160903165

Following gene: 160903167

Centisome position: 87.39

GC content: 37.19

Gene sequence:

>1011_bases
ATGAATACACTTTTTAGGGGAAAGGATTTTATAACTACACAAGAATGGAGTAAAGAAGAATTAGAAACTGTTTTTGAATT
ATCTAATGAGCTTAAAATGAGGTTTGCATTAGGAGAACCTACGGATCATTTGTTAAGATCAAAAACTATCTTTATGATGT
TTTTCGAACAATCTACACGAACTCGAAATTCTATAGAAGCTGGCATCACTCAACTGGGGGGACATGCTCATGATCTGACC
CCGGATAAGATGCAACTTTCTCATGGTGAATCCGCAAAGGATACTGCTATTGTCTTGAGTCGATTCGGTCATGCCATAGC
GATAAGAAACTGTTTCTTTGGAATTGGTAACAATTACATGAGAGAGGTTGCAAAATATGCGGATGTACCTGTTATTAACC
TTCAAGATGATTTCTACCATCCTCTACAAGGTTTAGCGGATTTGATGACAATAAAAGAAAAATGTGGTAATGATCTTAGA
AATATTAAAGTCACTATATCTTGGGCTTATGCAACATCCCATGCAAAACCTTTGTCTGTACCTCAAACGCAAGCATTACT
ATTTACAAGATATGGAATGGACGTAACTATCGCTCACCCAAAAGAATTTCCACTTATGCCTGAACTCATGAAACAAGCAA
AACAAAACGCAGAAAAACATGGTGGAAGTTTAAAGTTCACAAACGATATGGATGAGGCTTTCGATGGAGCCCAAATTGTA
ATTCCAAAGAATTGGGGTGGATTTTTAGGAGTTGAAGATCCTGATACAGATGAAGGTAAAAAACAGATGAAGGAAAATCT
TGAAAAACACAAAGATTGGATCTGTGATGAAAGAAGAATGTCTTTAGCCGATAAAGATGTCCTTTATATGCACGCGATGC
CCGCAGACAGAGGCAAAGAAGTAACTGATTCTGTTATAGATGGTCCTCATTCTATAATATATGATGAAGCGGAAAATCGT
TTACATACAGCAAAAGCAATCATGGCTTTGACTATGGGAGGAAGGCCTTGA

Upstream 100 bases:

>100_bases
ATTTTAAGAGGAAAAGTAATCGTAAAAGATAGAAATTTCCTAGGAGAAAAAGGTTTTGGAAGGTTTATAAAAGCTATATA
ATTATATTGGAGGAGATAAG

Downstream 100 bases:

>100_bases
TCATTATTTGGAGGTGAACAATCATTTTTAAAACTGTTAATCAACCAAAAAAGAGAATAGACGCATACGAAAAGGTTACT
GGAAAAGCTAAATTTGCAGA

Product: aspartate/ornithine carbamoyltransferase carbamoyl phosphate-binding subunit

Products: NA

Alternate protein names: OTCase [H]

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MNTLFRGKDFITTQEWSKEELETVFELSNELKMRFALGEPTDHLLRSKTIFMMFFEQSTRTRNSIEAGITQLGGHAHDLT
PDKMQLSHGESAKDTAIVLSRFGHAIAIRNCFFGIGNNYMREVAKYADVPVINLQDDFYHPLQGLADLMTIKEKCGNDLR
NIKVTISWAYATSHAKPLSVPQTQALLFTRYGMDVTIAHPKEFPLMPELMKQAKQNAEKHGGSLKFTNDMDEAFDGAQIV
IPKNWGGFLGVEDPDTDEGKKQMKENLEKHKDWICDERRMSLADKDVLYMHAMPADRGKEVTDSVIDGPHSIIYDEAENR
LHTAKAIMALTMGGRP

Sequences:

>Translated_336_residues
MNTLFRGKDFITTQEWSKEELETVFELSNELKMRFALGEPTDHLLRSKTIFMMFFEQSTRTRNSIEAGITQLGGHAHDLT
PDKMQLSHGESAKDTAIVLSRFGHAIAIRNCFFGIGNNYMREVAKYADVPVINLQDDFYHPLQGLADLMTIKEKCGNDLR
NIKVTISWAYATSHAKPLSVPQTQALLFTRYGMDVTIAHPKEFPLMPELMKQAKQNAEKHGGSLKFTNDMDEAFDGAQIV
IPKNWGGFLGVEDPDTDEGKKQMKENLEKHKDWICDERRMSLADKDVLYMHAMPADRGKEVTDSVIDGPHSIIYDEAENR
LHTAKAIMALTMGGRP
>Mature_336_residues
MNTLFRGKDFITTQEWSKEELETVFELSNELKMRFALGEPTDHLLRSKTIFMMFFEQSTRTRNSIEAGITQLGGHAHDLT
PDKMQLSHGESAKDTAIVLSRFGHAIAIRNCFFGIGNNYMREVAKYADVPVINLQDDFYHPLQGLADLMTIKEKCGNDLR
NIKVTISWAYATSHAKPLSVPQTQALLFTRYGMDVTIAHPKEFPLMPELMKQAKQNAEKHGGSLKFTNDMDEAFDGAQIV
IPKNWGGFLGVEDPDTDEGKKQMKENLEKHKDWICDERRMSLADKDVLYMHAMPADRGKEVTDSVIDGPHSIIYDEAENR
LHTAKAIMALTMGGRP

Specific function: Unknown

COG id: COG0078

COG function: function code E; Ornithine carbamoyltransferase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATCase/OTCase family [H]

Homologues:

Organism=Homo sapiens, GI38788445, Length=325, Percent_Identity=31.0769230769231, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI18105007, Length=335, Percent_Identity=23.5820895522388, Blast_Score=89, Evalue=7e-18,
Organism=Escherichia coli, GI48994908, Length=360, Percent_Identity=36.1111111111111, Blast_Score=204, Evalue=7e-54,
Organism=Escherichia coli, GI1786469, Length=352, Percent_Identity=30.1136363636364, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1790703, Length=347, Percent_Identity=28.8184438040346, Blast_Score=133, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI193204318, Length=151, Percent_Identity=31.1258278145695, Blast_Score=77, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322373, Length=341, Percent_Identity=28.1524926686217, Blast_Score=125, Evalue=8e-30,
Organism=Saccharomyces cerevisiae, GI6322331, Length=335, Percent_Identity=23.8805970149254, Blast_Score=84, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24642586, Length=339, Percent_Identity=23.598820058997, Blast_Score=92, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006132
- InterPro:   IPR006130
- InterPro:   IPR006131
- InterPro:   IPR002292 [H]

Pfam domain/function: PF00185 OTCace; PF02729 OTCace_N [H]

EC number: =2.1.3.3 [H]

Molecular weight: Translated: 38012; Mature: 38012

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS00097 CARBAMOYLTRANSFERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLFRGKDFITTQEWSKEELETVFELSNELKMRFALGEPTDHLLRSKTIFMMFFEQSTR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCEEEEEEECHHHC
TRNSIEAGITQLGGHAHDLTPDKMQLSHGESAKDTAIVLSRFGHAIAIRNCFFGIGNNYM
HHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHH
REVAKYADVPVINLQDDFYHPLQGLADLMTIKEKCGNDLRNIKVTISWAYATSHAKPLSV
HHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCC
PQTQALLFTRYGMDVTIAHPKEFPLMPELMKQAKQNAEKHGGSLKFTNDMDEAFDGAQIV
CCHHHHEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHCCCCEEE
IPKNWGGFLGVEDPDTDEGKKQMKENLEKHKDWICDERRMSLADKDVLYMHAMPADRGKE
EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCCCCH
VTDSVIDGPHSIIYDEAENRLHTAKAIMALTMGGRP
HHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNTLFRGKDFITTQEWSKEELETVFELSNELKMRFALGEPTDHLLRSKTIFMMFFEQSTR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCEEEEEEECHHHC
TRNSIEAGITQLGGHAHDLTPDKMQLSHGESAKDTAIVLSRFGHAIAIRNCFFGIGNNYM
HHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCHHHH
REVAKYADVPVINLQDDFYHPLQGLADLMTIKEKCGNDLRNIKVTISWAYATSHAKPLSV
HHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCC
PQTQALLFTRYGMDVTIAHPKEFPLMPELMKQAKQNAEKHGGSLKFTNDMDEAFDGAQIV
CCHHHHEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHCCCCEEE
IPKNWGGFLGVEDPDTDEGKKQMKENLEKHKDWICDERRMSLADKDVLYMHAMPADRGKE
EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCCCCCH
VTDSVIDGPHSIIYDEAENRLHTAKAIMALTMGGRP
HHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]